RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 PRKCEQ02156 737 aa8.13□□□□□ -1.11
BRCA1-214ENST00000477152 RNASELQ05823 741 aaKnown RBP8.13□□□□□ -1.11
BRCA1-214ENST00000477152 ENOX2Q16206 610 aaKnown RBP8.13□□□□□ -1.11
BRCA1-214ENST00000477152 DBN1Q16643 649 aa8.13□□□□□ -1.11
BRCA1-214ENST00000477152 ADCK5Q3MIX3 580 aa8.13□□□□□ -1.11
BRCA1-214ENST00000477152 Q4G0T1 1027 aa8.13□□□□□ -1.11
BRCA1-214ENST00000477152 MOXD1Q6UVY6 613 aa8.13□□□□□ -1.11
BRCA1-214ENST00000477152 GLB1LQ6UWU2 654 aa8.13□□□□□ -1.11
BRCA1-214ENST00000477152 TTC16Q8NEE8 873 aa8.13□□□□□ -1.11
BRCA1-214ENST00000477152 CRYGNQ8WXF5 182 aa8.13□□□□□ -1.11
BRCA1-214ENST00000477152 CASD1Q96PB1 797 aa8.13□□□□□ -1.11
BRCA1-214ENST00000477152 FAM193BQ96PV7 902 aaPredicted RBP8.13□□□□□ -1.11
BRCA1-214ENST00000477152 PPP1R16BQ96T49 567 aa8.13□□□□□ -1.11
BRCA1-214ENST00000477152 KANSL3Q9P2N6 904 aa8.13□□□□□ -1.11
BRCA1-214ENST00000477152 MYO7AQ13402 2215 aa8.12□□□□□ -1.11
BRCA1-214ENST00000477152 ZBTB42B2RXF5 422 aa8.12□□□□□ -1.11
BRCA1-214ENST00000477152 CHMP2AO43633 222 aa8.12□□□□□ -1.11
BRCA1-214ENST00000477152 GAS2O43903 313 aaKnown RBP8.12□□□□□ -1.11
BRCA1-214ENST00000477152 XYLBO75191 536 aa8.12□□□□□ -1.11
BRCA1-214ENST00000477152 TNFRSF21O75509 655 aa8.12□□□□□ -1.11
BRCA1-214ENST00000477152 FGFR1P11362 822 aa8.12□□□□□ -1.11
BRCA1-214ENST00000477152 GATMP50440 423 aa8.12□□□□□ -1.11
BRCA1-214ENST00000477152 ERVFC1P60507 584 aa8.12□□□□□ -1.11
BRCA1-214ENST00000477152 UBAP2LQ14157 1087 aaKnown RBP8.12□□□□□ -1.11
BRCA1-214ENST00000477152 PTPN21Q16825 1174 aa8.12□□□□□ -1.11
BRCA1-214ENST00000477152 ATAT1Q5SQI0 421 aa8.12□□□□□ -1.11
BRCA1-214ENST00000477152 TWF2Q6IBS0 349 aaKnown RBP8.12□□□□□ -1.11
BRCA1-214ENST00000477152 OTUD6AQ7L8S5 288 aa8.12□□□□□ -1.11
BRCA1-214ENST00000477152 KRT25Q7Z3Z0 450 aa8.12□□□□□ -1.11
BRCA1-214ENST00000477152 ZNF438Q7Z4V0 828 aa8.12□□□□□ -1.11
BRCA1-214ENST00000477152 HACE1Q8IYU2 909 aa8.12□□□□□ -1.11
BRCA1-214ENST00000477152 CNNM3Q8NE01 707 aa8.12□□□□□ -1.11
BRCA1-214ENST00000477152 TMEM40Q8WWA1 233 aa8.12□□□□□ -1.11
BRCA1-214ENST00000477152 SUSD6Q92537 303 aa8.12□□□□□ -1.11
BRCA1-214ENST00000477152 SLC5A5Q92911 643 aa8.12□□□□□ -1.11
BRCA1-214ENST00000477152 KCNB2Q92953 911 aa8.12□□□□□ -1.11
BRCA1-214ENST00000477152 EMILIN2Q9BXX0 1053 aa8.12□□□□□ -1.11
BRCA1-214ENST00000477152 ADAMTS10Q9H324 1103 aa8.12□□□□□ -1.11
BRCA1-214ENST00000477152 UBN1Q9NPG3 1134 aa8.12□□□□□ -1.11
BRCA1-214ENST00000477152 PCDHA4Q9UN74 947 aa8.12□□□□□ -1.11
BRCA1-214ENST00000477152 CYP46A1Q9Y6A2 500 aa8.12□□□□□ -1.11
BRCA1-214ENST00000477152 SLC35F4A4IF30 521 aa8.11□□□□□ -1.11
BRCA1-214ENST00000477152 LCE2BO14633 110 aa8.11□□□□□ -1.11
BRCA1-214ENST00000477152 MSH4O15457 936 aa8.11□□□□□ -1.11
BRCA1-214ENST00000477152 BAG4O95429 457 aaKnown RBP8.11□□□□□ -1.11
BRCA1-214ENST00000477152 CXCL14O95715 111 aa8.11□□□□□ -1.11
BRCA1-214ENST00000477152 GCFC2P16383 781 aaKnown RBP8.11□□□□□ -1.11
BRCA1-214ENST00000477152 PSMC5P62195 406 aa8.11□□□□□ -1.11
BRCA1-214ENST00000477152 NONOQ15233 471 aaKnown RBP eCLIP8.11□□□□□ -1.11
BRCA1-214ENST00000477152 PCBP1Q15365 356 aaKnown RBP eCLIP8.11□□□□□ -1.11
BRCA1-214ENST00000477152 TSNAXIP1Q2TAA8 658 aa8.11□□□□□ -1.11
BRCA1-214ENST00000477152 MTERF2Q49AM1 385 aa8.11□□□□□ -1.11
BRCA1-214ENST00000477152 BLIDQ8IZY5 108 aa8.11□□□□□ -1.11
BRCA1-214ENST00000477152 LRRC71Q8N4P6 559 aa8.11□□□□□ -1.11
BRCA1-214ENST00000477152 MRPL43Q8N983 215 aaKnown RBP8.11□□□□□ -1.11
BRCA1-214ENST00000477152 TCP11Q8WWU5 503 aa8.11□□□□□ -1.11
BRCA1-214ENST00000477152 SLC7A3Q8WY07 619 aa8.11□□□□□ -1.11
BRCA1-214ENST00000477152 ACSF2Q96CM8 615 aaPredicted RBP8.11□□□□□ -1.11
BRCA1-214ENST00000477152 SLKQ9H2G2 1235 aaPredicted RBP8.11□□□□□ -1.11
BRCA1-214ENST00000477152 ADAM7Q9H2U9 754 aa8.11□□□□□ -1.11
BRCA1-214ENST00000477152 VCANP13611 3396 aa8.11□□□□□ -1.11
BRCA1-214ENST00000477152 CCDC194A0A1B0GVG4 234 aa8.11□□□□□ -1.11
BRCA1-214ENST00000477152 ASAP2O43150 1006 aa8.11□□□□□ -1.11
BRCA1-214ENST00000477152 GLP2RO95838 553 aa8.11□□□□□ -1.11
BRCA1-214ENST00000477152 RECKO95980 971 aa8.11□□□□□ -1.11
BRCA1-214ENST00000477152 LLGL2Q6P1M3 1020 aa8.11□□□□□ -1.11
BRCA1-214ENST00000477152 CATSPER4Q7RTX7 472 aa8.11□□□□□ -1.11
BRCA1-214ENST00000477152 SLC39A11Q8N1S5 342 aa8.11□□□□□ -1.11
BRCA1-214ENST00000477152 TBCKQ8TEA7 893 aa8.11□□□□□ -1.11
BRCA1-214ENST00000477152 WASF1Q92558 559 aa8.11□□□□□ -1.11
BRCA1-214ENST00000477152 PHKBQ93100 1093 aa8.11□□□□□ -1.11
BRCA1-214ENST00000477152 ZNF274Q96GC6 653 aaPredicted RBP8.11□□□□□ -1.11
BRCA1-214ENST00000477152 FAM20AQ96MK3 541 aa8.11□□□□□ -1.11
BRCA1-214ENST00000477152 AGXT2Q9BYV1 514 aa8.11□□□□□ -1.11
BRCA1-214ENST00000477152 BRMS1Q9HCU9 246 aa8.11□□□□□ -1.11
BRCA1-214ENST00000477152 IGSF5Q9NSI5 407 aa8.11□□□□□ -1.11
BRCA1-214ENST00000477152 FAM13BQ9NYF5 915 aa8.11□□□□□ -1.11
BRCA1-214ENST00000477152 VPS54Q9P1Q0 977 aa8.11□□□□□ -1.11
BRCA1-214ENST00000477152 CNTN3Q9P232 1028 aa8.11□□□□□ -1.11
BRCA1-214ENST00000477152 SUCLA2Q9P2R7 463 aaPredicted RBP8.11□□□□□ -1.11
BRCA1-214ENST00000477152 SORCS3Q9UPU3 1222 aa8.11□□□□□ -1.11
BRCA1-214ENST00000477152 SNX14Q9Y5W7 946 aa8.11□□□□□ -1.11
BRCA1-214ENST00000477152 CNTNAP2Q9UHC6 1331 aa8.11□□□□□ -1.11
BRCA1-214ENST00000477152 CYP3A7-CYP3A51PA0A087WV96 503 aa8.1□□□□□ -1.11
BRCA1-214ENST00000477152 PRPF40AO75400 957 aaKnown RBP8.1□□□□□ -1.11
BRCA1-214ENST00000477152 SASH3O75995 380 aa8.1□□□□□ -1.11
BRCA1-214ENST00000477152 CYP3A7P24462 503 aa8.1□□□□□ -1.11
BRCA1-214ENST00000477152 BCAR1P56945 870 aa8.1□□□□□ -1.11
BRCA1-214ENST00000477152 EVCP57679 992 aa8.1□□□□□ -1.11
BRCA1-214ENST00000477152 NOMO2Q5JPE7 1267 aa8.1□□□□□ -1.11
BRCA1-214ENST00000477152 EFHC2Q5JST6 749 aa8.1□□□□□ -1.11
BRCA1-214ENST00000477152 RUFY3Q7L099 469 aa8.1□□□□□ -1.11
BRCA1-214ENST00000477152 SRGAP1Q7Z6B7 1085 aa8.1□□□□□ -1.11
BRCA1-214ENST00000477152 DDX53Q86TM3 631 aaKnown RBP8.1□□□□□ -1.11
BRCA1-214ENST00000477152 NLRP8Q86W28 1048 aa8.1□□□□□ -1.11
BRCA1-214ENST00000477152 RHPN2Q8IUC4 686 aa8.1□□□□□ -1.11
BRCA1-214ENST00000477152 LINC01465Q8N7H1 131 aa8.1□□□□□ -1.11
BRCA1-214ENST00000477152 TDRD5Q8NAT2 981 aaKnown RBP8.1□□□□□ -1.11
BRCA1-214ENST00000477152 DAGLBQ8NCG7 672 aa8.1□□□□□ -1.11
BRCA1-214ENST00000477152 BACH2Q9BYV9 841 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms