RNA–Protein interactions for RNA: ENST00000477069.5

NUP188-205, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 2,941 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-205ENST00000477069 MORC4Q8TE76 937 aa12.36□□□□□ -0.43
NUP188-205ENST00000477069 SEPT1Q8WYJ6 367 aa12.36□□□□□ -0.43
NUP188-205ENST00000477069 FAM81BQ96LP2 452 aa12.36□□□□□ -0.43
NUP188-205ENST00000477069 RPS6KC1Q96S38 1066 aa12.36□□□□□ -0.43
NUP188-205ENST00000477069 PAGR1Q9BTK6 254 aa12.36□□□□□ -0.43
NUP188-205ENST00000477069 DDX47Q9H0S4 455 aaKnown RBP12.36□□□□□ -0.43
NUP188-205ENST00000477069 PLEKHA4Q9H4M7 779 aa12.36□□□□□ -0.43
NUP188-205ENST00000477069 NRBP2Q9NSY0 501 aa12.36□□□□□ -0.43
NUP188-205ENST00000477069 CTTNBP2NLQ9P2B4 639 aa12.36□□□□□ -0.43
NUP188-205ENST00000477069 K7ERI5 159 aa12.36□□□□□ -0.43
NUP188-205ENST00000477069 ADCY3O60266 1144 aa12.36□□□□□ -0.43
NUP188-205ENST00000477069 ACOT2P49753 483 aa12.36□□□□□ -0.43
NUP188-205ENST00000477069 Q3C1V9 767 aa12.36□□□□□ -0.43
NUP188-205ENST00000477069 ALS2CLQ60I27 953 aa12.36□□□□□ -0.43
NUP188-205ENST00000477069 CDCA2Q69YH5 1023 aaPredicted RBP12.36□□□□□ -0.43
NUP188-205ENST00000477069 GPAT2Q6NUI2 795 aa12.36□□□□□ -0.43
NUP188-205ENST00000477069 RNPC3Q96LT9 517 aaKnown RBP12.36□□□□□ -0.43
NUP188-205ENST00000477069 GPR20Q99678 358 aa12.36□□□□□ -0.43
NUP188-205ENST00000477069 TAF1DQ9H5J8 278 aaPredicted RBP12.36□□□□□ -0.43
NUP188-205ENST00000477069 GTF3C4Q9UKN8 822 aa12.36□□□□□ -0.43
NUP188-205ENST00000477069 NR2E1Q9Y466 385 aa12.36□□□□□ -0.43
NUP188-205ENST00000477069 PLXNB2O15031 1838 aa12.35□□□□□ -0.43
NUP188-205ENST00000477069 MIF4GDA9UHW6 222 aaKnown RBP12.35□□□□□ -0.43
NUP188-205ENST00000477069 ATMINO43313 823 aaPredicted RBP12.35□□□□□ -0.43
NUP188-205ENST00000477069 PHACTR2O75167 634 aa12.35□□□□□ -0.43
NUP188-205ENST00000477069 HLA-DRAP01903 254 aa12.35□□□□□ -0.43
NUP188-205ENST00000477069 FGGP02679 453 aa12.35□□□□□ -0.43
NUP188-205ENST00000477069 UNGP13051 313 aaPredicted RBP12.35□□□□□ -0.43
NUP188-205ENST00000477069 ACO1P21399 889 aaKnown RBP12.35□□□□□ -0.43
NUP188-205ENST00000477069 PEX5P50542 639 aa12.35□□□□□ -0.43
NUP188-205ENST00000477069 MKRN4PQ13434 485 aaPredicted RBP12.35□□□□□ -0.43
NUP188-205ENST00000477069 CLEC16AQ2KHT3 1053 aa12.35□□□□□ -0.43
NUP188-205ENST00000477069 WHAMMQ8TF30 809 aa12.35□□□□□ -0.43
NUP188-205ENST00000477069 PIK3R5Q8WYR1 880 aa12.35□□□□□ -0.43
NUP188-205ENST00000477069 L3MBTL3Q96JM7 780 aaPredicted RBP12.35□□□□□ -0.43
NUP188-205ENST00000477069 ZSWIM1Q9BR11 485 aa12.35□□□□□ -0.43
NUP188-205ENST00000477069 TARS2Q9BW92 718 aaKnown RBP12.35□□□□□ -0.43
NUP188-205ENST00000477069 FAM204AQ9H8W3 233 aa12.35□□□□□ -0.43
NUP188-205ENST00000477069 C1orf112Q9NSG2 853 aa12.35□□□□□ -0.43
NUP188-205ENST00000477069 IGKV6-21A0A0C4DH24 114 aa12.35□□□□□ -0.43
NUP188-205ENST00000477069 PGK2P07205 417 aa12.35□□□□□ -0.43
NUP188-205ENST00000477069 COPB2P35606 906 aa12.35□□□□□ -0.43
NUP188-205ENST00000477069 PTENP60484 403 aa12.35□□□□□ -0.43
NUP188-205ENST00000477069 CUL1Q13616 776 aa12.35□□□□□ -0.43
NUP188-205ENST00000477069 LMBRD2Q68DH5 695 aaPredicted RBP12.35□□□□□ -0.43
NUP188-205ENST00000477069 ACAD10Q6JQN1 1059 aa12.35□□□□□ -0.43
NUP188-205ENST00000477069 IQCKQ8N0W5 287 aa12.35□□□□□ -0.43
NUP188-205ENST00000477069 IFT81Q8WYA0 676 aa12.35□□□□□ -0.43
NUP188-205ENST00000477069 KRT35Q92764 455 aa12.35□□□□□ -0.43
NUP188-205ENST00000477069 CGRRF1Q99675 332 aa12.35□□□□□ -0.43
NUP188-205ENST00000477069 RBAKQ9NYW8 714 aaPredicted RBP12.35□□□□□ -0.43
NUP188-205ENST00000477069 TRPC6Q9Y210 931 aa12.35□□□□□ -0.43
NUP188-205ENST00000477069 TTLL13PA6NNM8 815 aa12.34□□□□□ -0.43
NUP188-205ENST00000477069 LDHAP00338 332 aaKnown RBP12.34□□□□□ -0.43
NUP188-205ENST00000477069 YBX3P16989 372 aaKnown RBP eCLIP12.34□□□□□ -0.432e-6■□□□□ 8.9
NUP188-205ENST00000477069 COMTP21964 271 aa12.34□□□□□ -0.43
NUP188-205ENST00000477069 MARCKSL1P49006 195 aa12.34□□□□□ -0.43
NUP188-205ENST00000477069 CELF3Q5SZQ8 465 aaKnown RBP12.34□□□□□ -0.43
NUP188-205ENST00000477069 CCDC62Q6P9F0 684 aa12.34□□□□□ -0.43
NUP188-205ENST00000477069 EEPD1Q7L9B9 569 aa12.34□□□□□ -0.43
NUP188-205ENST00000477069 BBXQ8WY36 941 aaPredicted RBP12.34□□□□□ -0.43
NUP188-205ENST00000477069 FAM167AQ96KS9 214 aa12.34□□□□□ -0.43
NUP188-205ENST00000477069 MSTO1Q9BUK6 570 aa12.34□□□□□ -0.43
NUP188-205ENST00000477069 APOBEC3GQ9HC16 384 aaKnown RBP12.34□□□□□ -0.43
NUP188-205ENST00000477069 SPON1Q9HCB6 807 aa12.34□□□□□ -0.43
NUP188-205ENST00000477069 UVRAGQ9P2Y5 699 aa12.34□□□□□ -0.43
NUP188-205ENST00000477069 CHORDC1Q9UHD1 332 aaPredicted RBP12.34□□□□□ -0.43
NUP188-205ENST00000477069 AMACRQ9UHK6 382 aa12.34□□□□□ -0.43
NUP188-205ENST00000477069 SCN4AP35499 1836 aa12.34□□□□□ -0.43
NUP188-205ENST00000477069 ABLIM1O14639 778 aa12.34□□□□□ -0.43
NUP188-205ENST00000477069 MSCO60682 206 aa12.34□□□□□ -0.43
NUP188-205ENST00000477069 HSDL1Q3SXM5 330 aa12.34□□□□□ -0.43
NUP188-205ENST00000477069 KCNV1Q6PIU1 500 aa12.34□□□□□ -0.43
NUP188-205ENST00000477069 ZPBP2Q6X784 338 aa12.34□□□□□ -0.43
NUP188-205ENST00000477069 USP50Q70EL3 339 aaPredicted RBP12.34□□□□□ -0.43
NUP188-205ENST00000477069 PLPPR4Q7Z2D5 763 aa12.34□□□□□ -0.43
NUP188-205ENST00000477069 ZNF564Q8TBZ8 553 aaPredicted RBP12.34□□□□□ -0.43
NUP188-205ENST00000477069 OPTNQ96CV9 577 aa12.34□□□□□ -0.43
NUP188-205ENST00000477069 ZIM3Q96PE6 472 aa12.34□□□□□ -0.43
NUP188-205ENST00000477069 FNBP1Q96RU3 617 aa12.34□□□□□ -0.43
NUP188-205ENST00000477069 NUP85Q9BW27 656 aa12.34□□□□□ -0.43
NUP188-205ENST00000477069 ERVK-5Q9HDB9 667 aa12.34□□□□□ -0.43
NUP188-205ENST00000477069 CNTN6Q9UQ52 1028 aa12.34□□□□□ -0.43
NUP188-205ENST00000477069 CALCAP01258 141 aa12.34□□□□□ -0.43
NUP188-205ENST00000477069 TNNI1P19237 187 aa12.34□□□□□ -0.43
NUP188-205ENST00000477069 CTNNA2P26232 953 aa12.34□□□□□ -0.43
NUP188-205ENST00000477069 HSPA9P38646 679 aaKnown RBP12.34□□□□□ -0.43
NUP188-205ENST00000477069 PIK3CAP42336 1068 aa12.34□□□□□ -0.43
NUP188-205ENST00000477069 ZNF677Q86XU0 584 aa12.34□□□□□ -0.43
NUP188-205ENST00000477069 ZC3H15Q8WU90 426 aaKnown RBP12.34□□□□□ -0.43
NUP188-205ENST00000477069 PRPF31Q8WWY3 499 aaKnown RBP12.34□□□□□ -0.43
NUP188-205ENST00000477069 NEUROG2Q9H2A3 272 aa12.34□□□□□ -0.43
NUP188-205ENST00000477069 CYP1A1P04798 512 aaPredicted RBP12.33□□□□□ -0.44
NUP188-205ENST00000477069 KRT5P13647 590 aa12.33□□□□□ -0.44
NUP188-205ENST00000477069 CTNNA1P35221 906 aaKnown RBP12.33□□□□□ -0.44
NUP188-205ENST00000477069 GJA5P36382 358 aa12.33□□□□□ -0.44
NUP188-205ENST00000477069 ZNF211Q13398 564 aaPredicted RBP12.33□□□□□ -0.44
NUP188-205ENST00000477069 CLUL1Q15846 466 aa12.33□□□□□ -0.44
NUP188-205ENST00000477069 IER5Q5VY09 327 aa12.33□□□□□ -0.44
NUP188-205ENST00000477069 C9orf131Q5VYM1 1079 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms