RNA–Protein interactions for RNA: ENST00000476954.1

SMG5-204, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 1,161 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-204ENST00000476954 TRMT61BQ9BVS5 477 aaKnown RBP17.15■□□□□ 0.34
SMG5-204ENST00000476954 SCNM1Q9BWG6 230 aa17.15■□□□□ 0.34
SMG5-204ENST00000476954 NXF3Q9H4D5 531 aaKnown RBP17.15■□□□□ 0.34
SMG5-204ENST00000476954 BMP2KQ9NSY1 1161 aaPredicted RBP17.15■□□□□ 0.34
SMG5-204ENST00000476954 ADAMTS20P59510 1910 aa17.15■□□□□ 0.34
SMG5-204ENST00000476954 NCANO14594 1321 aa17.15■□□□□ 0.34
SMG5-204ENST00000476954 PAPSS2O95340 614 aaPredicted RBP17.14■□□□□ 0.33
SMG5-204ENST00000476954 POU2F2P09086 479 aa17.14■□□□□ 0.33
SMG5-204ENST00000476954 SFNP31947 248 aa17.14■□□□□ 0.33
SMG5-204ENST00000476954 CIITAP33076 1130 aa17.14■□□□□ 0.33
SMG5-204ENST00000476954 OR1D2P34982 312 aa17.14■□□□□ 0.33
SMG5-204ENST00000476954 SOX9P48436 509 aa17.14■□□□□ 0.33
SMG5-204ENST00000476954 PXNP49023 591 aaPredicted RBP17.14■□□□□ 0.33
SMG5-204ENST00000476954 NPEPPSP55786 919 aa17.14■□□□□ 0.33
SMG5-204ENST00000476954 HSP90AA2PQ14568 343 aaPredicted RBP17.14■□□□□ 0.33
SMG5-204ENST00000476954 PLA2G2CQ5R387 149 aa17.14■□□□□ 0.33
SMG5-204ENST00000476954 VITQ6UXI7 678 aa17.14■□□□□ 0.33
SMG5-204ENST00000476954 MIER3Q7Z3K6 550 aa17.14■□□□□ 0.33
SMG5-204ENST00000476954 SRGAP1Q7Z6B7 1085 aa17.14■□□□□ 0.33
SMG5-204ENST00000476954 SLC5A5Q92911 643 aa17.14■□□□□ 0.33
SMG5-204ENST00000476954 MTA3Q9BTC8 594 aa17.14■□□□□ 0.33
SMG5-204ENST00000476954 SF3B1O75533 1304 aaKnown RBP eCLIP17.14■□□□□ 0.33
SMG5-204ENST00000476954 TSPAN1O60635 241 aa17.13■□□□□ 0.33
SMG5-204ENST00000476954 KIF4AO95239 1232 aa17.13■□□□□ 0.33
SMG5-204ENST00000476954 RAP1GAPP47736 663 aa17.13■□□□□ 0.33
SMG5-204ENST00000476954 LAMTOR4Q0VGL1 99 aa17.13■□□□□ 0.33
SMG5-204ENST00000476954 SOWAHCQ53LP3 525 aaPredicted RBP17.13■□□□□ 0.33
SMG5-204ENST00000476954 LRCH2Q5VUJ6 765 aa17.13■□□□□ 0.33
SMG5-204ENST00000476954 WDR5BQ86VZ2 330 aa17.13■□□□□ 0.33
SMG5-204ENST00000476954 IRF7Q92985 503 aa17.13■□□□□ 0.33
SMG5-204ENST00000476954 TEKT3Q9BXF9 490 aa17.13■□□□□ 0.33
SMG5-204ENST00000476954 GLT8D2Q9H1C3 349 aa17.13■□□□□ 0.33
SMG5-204ENST00000476954 ZFP14Q9HCL3 533 aa17.13■□□□□ 0.33
SMG5-204ENST00000476954 RBM8AQ9Y5S9 174 aaKnown RBP17.13■□□□□ 0.33
SMG5-204ENST00000476954 CASTOR2A6NHX0 329 aa17.12■□□□□ 0.33
SMG5-204ENST00000476954 C4orf47A7E2U8 309 aa17.12■□□□□ 0.33
SMG5-204ENST00000476954 hCG_1984214I3L0E3 225 aa17.12■□□□□ 0.33
SMG5-204ENST00000476954 IGFBP6P24592 240 aaPredicted RBP17.12■□□□□ 0.33
SMG5-204ENST00000476954 VIPR2P41587 438 aa17.12■□□□□ 0.33
SMG5-204ENST00000476954 RAB33AQ14088 237 aa17.12■□□□□ 0.33
SMG5-204ENST00000476954 PRSS36Q5K4E3 855 aa17.12■□□□□ 0.33
SMG5-204ENST00000476954 CDR2LQ86X02 465 aaPredicted RBP17.12■□□□□ 0.33
SMG5-204ENST00000476954 ZNF713Q8N859 430 aaPredicted RBP17.12■□□□□ 0.33
SMG5-204ENST00000476954 ZSWIM3Q96MP5 696 aa17.12■□□□□ 0.33
SMG5-204ENST00000476954 RIT2Q99578 217 aa17.12■□□□□ 0.33
SMG5-204ENST00000476954 GIT1Q9Y2X7 761 aa17.12■□□□□ 0.33
SMG5-204ENST00000476954 ATG2BQ96BY7 2078 aa17.12■□□□□ 0.33
SMG5-204ENST00000476954 GSPT1P15170 499 aaKnown RBP17.11■□□□□ 0.33
SMG5-204ENST00000476954 CHMLP26374 656 aa17.11■□□□□ 0.33
SMG5-204ENST00000476954 MPLP40238 635 aa17.11■□□□□ 0.33
SMG5-204ENST00000476954 CCR2P41597 374 aa17.11■□□□□ 0.33
SMG5-204ENST00000476954 RBM25P49756 843 aaKnown RBP17.11■□□□□ 0.33
SMG5-204ENST00000476954 NUCB1Q02818 461 aa17.11■□□□□ 0.33
SMG5-204ENST00000476954 GRIK3Q13003 919 aa17.11■□□□□ 0.33
SMG5-204ENST00000476954 UVSSAQ2YD98 709 aa17.11■□□□□ 0.33
SMG5-204ENST00000476954 SH3PXD2AQ5TCZ1 1133 aa17.11■□□□□ 0.33
SMG5-204ENST00000476954 KIAA1211LQ6NV74 962 aa17.11■□□□□ 0.33
SMG5-204ENST00000476954 TXNDC11Q6PKC3 985 aa17.11■□□□□ 0.33
SMG5-204ENST00000476954 REXO1Q8N1G1 1221 aaKnown RBP17.11■□□□□ 0.33
SMG5-204ENST00000476954 RNF149Q8NC42 400 aa17.11■□□□□ 0.33
SMG5-204ENST00000476954 GAB3Q8WWW8 586 aa17.11■□□□□ 0.33
SMG5-204ENST00000476954 LOXL4Q96JB6 756 aa17.11■□□□□ 0.33
SMG5-204ENST00000476954 CCDC136Q96JN2 1154 aa17.11■□□□□ 0.33
SMG5-204ENST00000476954 CSRNP2Q9H175 543 aa17.11■□□□□ 0.33
SMG5-204ENST00000476954 CXCL16Q9H2A7 254 aa17.11■□□□□ 0.33
SMG5-204ENST00000476954 TRPV5Q9NQA5 729 aa17.11■□□□□ 0.33
SMG5-204ENST00000476954 LAMA1P25391 3075 aa17.11■□□□□ 0.33
SMG5-204ENST00000476954 KIF26AQ9ULI4 1882 aaPredicted RBP17.1■□□□□ 0.33
SMG5-204ENST00000476954 ARNTLO00327 626 aa17.1■□□□□ 0.33
SMG5-204ENST00000476954 EXTL3O43909 919 aa17.1■□□□□ 0.33
SMG5-204ENST00000476954 RPP40O75818 363 aaKnown RBP17.1■□□□□ 0.33
SMG5-204ENST00000476954 PSMD10O75832 226 aa17.1■□□□□ 0.33
SMG5-204ENST00000476954 ERLIN2O94905 339 aa17.1■□□□□ 0.33
SMG5-204ENST00000476954 PSMC3P17980 439 aa17.1■□□□□ 0.33
SMG5-204ENST00000476954 APOA5Q6Q788 366 aa17.1■□□□□ 0.33
SMG5-204ENST00000476954 CACNA2D4Q7Z3S7 1137 aa17.1■□□□□ 0.33
SMG5-204ENST00000476954 SGMS1Q86VZ5 419 aa17.1■□□□□ 0.33
SMG5-204ENST00000476954 ASB16Q96NS5 453 aa17.1■□□□□ 0.33
SMG5-204ENST00000476954 CORO1BQ9BR76 489 aa17.1■□□□□ 0.33
SMG5-204ENST00000476954 EDEM2Q9BV94 578 aa17.1■□□□□ 0.33
SMG5-204ENST00000476954 BRPF3Q9ULD4 1205 aa17.1■□□□□ 0.33
SMG5-204ENST00000476954 CDY1Q9Y6F8 540 aa17.1■□□□□ 0.33
SMG5-204ENST00000476954 WDFY3Q8IZQ1 3526 aa17.1■□□□□ 0.33
SMG5-204ENST00000476954 CACNA1EQ15878 2313 aa17.09■□□□□ 0.33
SMG5-204ENST00000476954 WDR27A2RRH5 827 aa17.09■□□□□ 0.33
SMG5-204ENST00000476954 SLC38A8A6NNN8 435 aa17.09■□□□□ 0.33
SMG5-204ENST00000476954 PTPN2P17706 415 aa17.09■□□□□ 0.33
SMG5-204ENST00000476954 LRRC32Q14392 662 aa17.09■□□□□ 0.33
SMG5-204ENST00000476954 RTN1Q16799 776 aa17.09■□□□□ 0.33
SMG5-204ENST00000476954 PKN3Q6P5Z2 889 aa17.09■□□□□ 0.33
SMG5-204ENST00000476954 NOTUMQ6P988 496 aa17.09■□□□□ 0.33
SMG5-204ENST00000476954 C19orf48Q6RUI8 117 aa17.09■□□□□ 0.33
SMG5-204ENST00000476954 B3GNT9Q6UX72 402 aa17.09■□□□□ 0.33
SMG5-204ENST00000476954 TTC8Q8TAM2 541 aa17.09■□□□□ 0.33
SMG5-204ENST00000476954 PSPC1Q8WXF1 523 aaKnown RBP17.09■□□□□ 0.33
SMG5-204ENST00000476954 RSPRY1Q96DX4 576 aa17.09■□□□□ 0.33
SMG5-204ENST00000476954 ZMYND12Q9H0C1 365 aa17.09■□□□□ 0.33
SMG5-204ENST00000476954 AVENQ9NQS1 362 aaPredicted RBP17.09■□□□□ 0.33
SMG5-204ENST00000476954 VPS45Q9NRW7 570 aa17.09■□□□□ 0.33
SMG5-204ENST00000476954 RBM28Q9NW13 759 aaKnown RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms