RNA–Protein interactions for RNA: ENST00000476932.5

LIMS2-214, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,269 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-214ENST00000476932 GINM1Q9NU53 330 aa22.56■■□□□ 1.2
LIMS2-214ENST00000476932 C5orf60A6NFR6 353 aa22.56■■□□□ 1.2
LIMS2-214ENST00000476932 NR3C2P08235 984 aa22.56■■□□□ 1.2
LIMS2-214ENST00000476932 DLATP10515 647 aaKnown RBP22.56■■□□□ 1.2
LIMS2-214ENST00000476932 CCND2P30279 289 aa22.56■■□□□ 1.2
LIMS2-214ENST00000476932 FNTAP49354 379 aa22.56■■□□□ 1.2
LIMS2-214ENST00000476932 RWDD2BP57060 319 aa22.56■■□□□ 1.2
LIMS2-214ENST00000476932 SLC29A2Q14542 456 aa22.56■■□□□ 1.2
LIMS2-214ENST00000476932 CIAPIN1Q6FI81 312 aa22.56■■□□□ 1.2
LIMS2-214ENST00000476932 XRRA1Q6P2D8 792 aa22.56■■□□□ 1.2
LIMS2-214ENST00000476932 GPD1LQ8N335 351 aa22.56■■□□□ 1.2
LIMS2-214ENST00000476932 REPS2Q8NFH8 660 aa22.56■■□□□ 1.2
LIMS2-214ENST00000476932 KIAA0754O94854 1291 aa22.55■■□□□ 1.2
LIMS2-214ENST00000476932 KCNJ1P48048 391 aa22.55■■□□□ 1.2
LIMS2-214ENST00000476932 GCNT1Q02742 428 aa22.55■■□□□ 1.2
LIMS2-214ENST00000476932 ZNF516Q92618 1163 aa22.55■■□□□ 1.2
LIMS2-214ENST00000476932 ART4Q93070 314 aa22.55■■□□□ 1.2
LIMS2-214ENST00000476932 PARP2Q9UGN5 583 aa22.55■■□□□ 1.2
LIMS2-214ENST00000476932 DDX20Q9UHI6 824 aaKnown RBP22.55■■□□□ 1.2
LIMS2-214ENST00000476932 HNRNPDLO14979 420 aaKnown RBP22.55■■□□□ 1.2
LIMS2-214ENST00000476932 TP73O15350 636 aa22.55■■□□□ 1.2
LIMS2-214ENST00000476932 FSBPO95073 299 aa22.55■■□□□ 1.2
LIMS2-214ENST00000476932 UNGP13051 313 aaPredicted RBP22.55■■□□□ 1.2
LIMS2-214ENST00000476932 ENPEPQ07075 957 aa22.55■■□□□ 1.2
LIMS2-214ENST00000476932 OTUD6AQ7L8S5 288 aa22.55■■□□□ 1.2
LIMS2-214ENST00000476932 OTUD6BQ8N6M0 293 aa22.55■■□□□ 1.2
LIMS2-214ENST00000476932 MDM1Q8TC05 714 aa22.55■■□□□ 1.2
LIMS2-214ENST00000476932 TRIM7Q9C029 511 aa22.55■■□□□ 1.2
LIMS2-214ENST00000476932 ADAM7Q9H2U9 754 aa22.55■■□□□ 1.2
LIMS2-214ENST00000476932 LRRC19Q9H756 370 aa22.55■■□□□ 1.2
LIMS2-214ENST00000476932 MTUS1Q9ULD2 1270 aa22.55■■□□□ 1.2
LIMS2-214ENST00000476932 PTPN22Q9Y2R2 807 aa22.55■■□□□ 1.2
LIMS2-214ENST00000476932 CTDP1Q9Y5B0 961 aaPredicted RBP22.55■■□□□ 1.2
LIMS2-214ENST00000476932 GARTP22102 1010 aa22.54■■□□□ 1.2
LIMS2-214ENST00000476932 ZNF280AP59817 542 aaPredicted RBP22.54■■□□□ 1.2
LIMS2-214ENST00000476932 BYSLQ13895 437 aaKnown RBP22.54■■□□□ 1.2
LIMS2-214ENST00000476932 CCDC105Q8IYK2 499 aa22.54■■□□□ 1.2
LIMS2-214ENST00000476932 CNOT10Q9H9A5 744 aaKnown RBP22.54■■□□□ 1.2
LIMS2-214ENST00000476932 ARHGAP28Q9P2N2 729 aa22.54■■□□□ 1.2
LIMS2-214ENST00000476932 CNOT7Q9UIV1 285 aaKnown RBP22.54■■□□□ 1.2
LIMS2-214ENST00000476932 LOC285556D6RIA3 1793 aa22.54■■□□□ 1.2
LIMS2-214ENST00000476932 MYPNQ86TC9 1320 aa22.54■■□□□ 1.2
LIMS2-214ENST00000476932 CLDN3O15551 220 aa22.54■■□□□ 1.2
LIMS2-214ENST00000476932 KRT5P13647 590 aa22.54■■□□□ 1.2
LIMS2-214ENST00000476932 FGFR4P22455 802 aa22.54■■□□□ 1.2
LIMS2-214ENST00000476932 RTP1P59025 263 aa22.54■■□□□ 1.2
LIMS2-214ENST00000476932 BRDTQ58F21 947 aaPredicted RBP22.54■■□□□ 1.2
LIMS2-214ENST00000476932 CCDC60Q8IWA6 550 aaPredicted RBP22.54■■□□□ 1.2
LIMS2-214ENST00000476932 SLCO2A1Q92959 643 aa22.54■■□□□ 1.2
LIMS2-214ENST00000476932 ATP6V0A1Q93050 837 aa22.54■■□□□ 1.2
LIMS2-214ENST00000476932 RUNDC3BQ96NL0 473 aa22.54■■□□□ 1.2
LIMS2-214ENST00000476932 FAM213AQ9BRX8 229 aa22.54■■□□□ 1.2
LIMS2-214ENST00000476932 MTRF1LQ9UGC7 380 aaKnown RBP22.54■■□□□ 1.2
LIMS2-214ENST00000476932 MROH7Q68CQ1 1323 aa22.53■■□□□ 1.2
LIMS2-214ENST00000476932 FSCN2O14926 492 aa22.53■■□□□ 1.2
LIMS2-214ENST00000476932 WNT7BP56706 349 aa22.53■■□□□ 1.2
LIMS2-214ENST00000476932 TNFAIP1Q13829 316 aa22.53■■□□□ 1.2
LIMS2-214ENST00000476932 ZNF568Q3ZCX4 644 aa22.53■■□□□ 1.2
LIMS2-214ENST00000476932 CYFIP1Q7L576 1253 aa22.53■■□□□ 1.2
LIMS2-214ENST00000476932 ANAPC7Q9UJX3 599 aa22.53■■□□□ 1.2
LIMS2-214ENST00000476932 PASKQ96RG2 1323 aa22.53■■□□□ 1.2
LIMS2-214ENST00000476932 RIPK2O43353 540 aa22.52■■□□□ 1.2
LIMS2-214ENST00000476932 ZC3H11AO75152 810 aaKnown RBP eCLIP22.52■■□□□ 1.2
LIMS2-214ENST00000476932 DGAT1O75907 488 aa22.52■■□□□ 1.2
LIMS2-214ENST00000476932 FDX1P10109 184 aa22.52■■□□□ 1.2
LIMS2-214ENST00000476932 MMP13P45452 471 aa22.52■■□□□ 1.2
LIMS2-214ENST00000476932 IFT88Q13099 833 aa22.52■■□□□ 1.2
LIMS2-214ENST00000476932 ERMARDQ5T6L9 678 aa22.52■■□□□ 1.2
LIMS2-214ENST00000476932 SWSAP1Q6NVH7 229 aa22.52■■□□□ 1.2
LIMS2-214ENST00000476932 ENOSF1Q7L5Y1 443 aa22.52■■□□□ 1.2
LIMS2-214ENST00000476932 USP37Q86T82 979 aa22.52■■□□□ 1.2
LIMS2-214ENST00000476932 HERPUD2Q9BSE4 406 aa22.52■■□□□ 1.2
LIMS2-214ENST00000476932 TMEM109Q9BVC6 243 aa22.52■■□□□ 1.2
LIMS2-214ENST00000476932 AZI2Q9H6S1 392 aa22.52■■□□□ 1.2
LIMS2-214ENST00000476932 CLDN10P78369 228 aa22.52■■□□□ 1.2
LIMS2-214ENST00000476932 PRKCEQ02156 737 aa22.52■■□□□ 1.2
LIMS2-214ENST00000476932 LLGL1Q15334 1064 aa22.52■■□□□ 1.2
LIMS2-214ENST00000476932 MCOLN2Q8IZK6 566 aa22.52■■□□□ 1.2
LIMS2-214ENST00000476932 MCPH1Q8NEM0 835 aa22.52■■□□□ 1.2
LIMS2-214ENST00000476932 CENPTQ96BT3 561 aa22.52■■□□□ 1.2
LIMS2-214ENST00000476932 XPO6Q96QU8 1125 aaKnown RBP22.52■■□□□ 1.2
LIMS2-214ENST00000476932 AVENQ9NQS1 362 aaPredicted RBP22.52■■□□□ 1.2
LIMS2-214ENST00000476932 MAFGO15525 162 aa22.51■■□□□ 1.19
LIMS2-214ENST00000476932 FBXW10Q5XX13 1052 aa22.51■■□□□ 1.19
LIMS2-214ENST00000476932 FAM129AQ9BZQ8 928 aa22.51■■□□□ 1.19
LIMS2-214ENST00000476932 CYP26B1Q9NR63 512 aa22.51■■□□□ 1.19
LIMS2-214ENST00000476932 SEPT9Q9UHD8 586 aaPredicted RBP22.51■■□□□ 1.19
LIMS2-214ENST00000476932 ZNF214Q9UL59 606 aaPredicted RBP22.51■■□□□ 1.19
LIMS2-214ENST00000476932 ECEL1O95672 775 aa22.51■■□□□ 1.19
LIMS2-214ENST00000476932 RARGP13631 454 aa22.51■■□□□ 1.19
LIMS2-214ENST00000476932 DRD4P21917 467 aa22.51■■□□□ 1.19
LIMS2-214ENST00000476932 IFI35P80217 286 aaPredicted RBP22.51■■□□□ 1.19
LIMS2-214ENST00000476932 TNFAIP8L3Q5GJ75 292 aa22.51■■□□□ 1.19
LIMS2-214ENST00000476932 LMBRD2Q68DH5 695 aaPredicted RBP22.51■■□□□ 1.19
LIMS2-214ENST00000476932 SNRNP48Q6IEG0 339 aaKnown RBP22.51■■□□□ 1.19
LIMS2-214ENST00000476932 LLGL2Q6P1M3 1020 aa22.51■■□□□ 1.19
LIMS2-214ENST00000476932 CNPY4Q8N129 248 aa22.51■■□□□ 1.19
LIMS2-214ENST00000476932 EPS8L3Q8TE67 593 aaKnown RBP22.51■■□□□ 1.19
LIMS2-214ENST00000476932 C1orf54Q8WWF1 131 aa22.51■■□□□ 1.19
LIMS2-214ENST00000476932 ATXN2LQ8WWM7 1075 aaKnown RBP22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms