RNA–Protein interactions for RNA: ENST00000476267.1

MRPL55-228, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 169 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-228ENST00000476267 RBM25P49756 843 aaKnown RBP14.46□□□□□ -0.09
MRPL55-228ENST00000476267 SAFBQ15424 915 aaKnown RBP eCLIP14.46□□□□□ -0.09
MRPL55-228ENST00000476267 ZNF174Q15697 407 aa14.46□□□□□ -0.09
MRPL55-228ENST00000476267 PHLDB3Q6NSJ2 640 aa14.46□□□□□ -0.09
MRPL55-228ENST00000476267 ERMNQ8TAM6 284 aa14.46□□□□□ -0.09
MRPL55-228ENST00000476267 GPR152Q8TDT2 470 aa14.46□□□□□ -0.09
MRPL55-228ENST00000476267 C8orf76Q96K31 380 aa14.46□□□□□ -0.09
MRPL55-228ENST00000476267 PIDD1Q9HB75 910 aa14.46□□□□□ -0.09
MRPL55-228ENST00000476267 PPP4R2Q9NY27 417 aa14.46□□□□□ -0.09
MRPL55-228ENST00000476267 DAXXQ9UER7 740 aaPredicted RBP14.46□□□□□ -0.09
MRPL55-228ENST00000476267 LIMCH1Q9UPQ0 1083 aa14.46□□□□□ -0.09
MRPL55-228ENST00000476267 ZFP37Q9Y6Q3 630 aaPredicted RBP14.46□□□□□ -0.09
MRPL55-228ENST00000476267 NUMBLQ9Y6R0 609 aa14.46□□□□□ -0.09
MRPL55-228ENST00000476267 DOCK6Q96HP0 2047 aa14.46□□□□□ -0.1
MRPL55-228ENST00000476267 PATJQ8NI35 1801 aa14.45□□□□□ -0.1
MRPL55-228ENST00000476267 TRIP11Q15643 1979 aa14.45□□□□□ -0.1
MRPL55-228ENST00000476267 ZFHX2Q9C0A1 2572 aaPredicted RBP14.45□□□□□ -0.1
MRPL55-228ENST00000476267 ARHGEF35A5YM69 484 aa14.45□□□□□ -0.1
MRPL55-228ENST00000476267 C8AP07357 584 aa14.45□□□□□ -0.1
MRPL55-228ENST00000476267 TRAPPC10P48553 1259 aa14.45□□□□□ -0.1
MRPL55-228ENST00000476267 NTHL1P78549 312 aa14.45□□□□□ -0.1
MRPL55-228ENST00000476267 ELAVL2Q12926 359 aaKnown RBP14.45□□□□□ -0.1
MRPL55-228ENST00000476267 RAB33AQ14088 237 aa14.45□□□□□ -0.1
MRPL55-228ENST00000476267 PDCD11Q14690 1871 aaKnown RBP14.45□□□□□ -0.1
MRPL55-228ENST00000476267 PPP2R5AQ15172 486 aa14.45□□□□□ -0.1
MRPL55-228ENST00000476267 DCAF4L1Q3SXM0 396 aa14.45□□□□□ -0.1
MRPL55-228ENST00000476267 XKR4Q5GH76 650 aa14.45□□□□□ -0.1
MRPL55-228ENST00000476267 TTC38Q5R3I4 469 aa14.45□□□□□ -0.1
MRPL55-228ENST00000476267 HAUS3Q68CZ6 603 aa14.45□□□□□ -0.1
MRPL55-228ENST00000476267 RSPO2Q6UXX9 243 aaPredicted RBP14.45□□□□□ -0.1
MRPL55-228ENST00000476267 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.45□□□□□ -0.1
MRPL55-228ENST00000476267 GRASPQ7Z6J2 395 aaPredicted RBP14.45□□□□□ -0.1
MRPL55-228ENST00000476267 CCDC83Q8IWF9 413 aa14.45□□□□□ -0.1
MRPL55-228ENST00000476267 IGSF22Q8N9C0 903 aa14.45□□□□□ -0.1
MRPL55-228ENST00000476267 C3orf58Q8NDZ4 430 aa14.45□□□□□ -0.1
MRPL55-228ENST00000476267 DEPTORQ8TB45 409 aa14.45□□□□□ -0.1
MRPL55-228ENST00000476267 FGF14Q92915 247 aa14.45□□□□□ -0.1
MRPL55-228ENST00000476267 NKD2Q969F2 451 aaPredicted RBP14.45□□□□□ -0.1
MRPL55-228ENST00000476267 SNX27Q96L92 541 aa14.45□□□□□ -0.1
MRPL55-228ENST00000476267 ADPGKQ9BRR6 497 aa14.45□□□□□ -0.1
MRPL55-228ENST00000476267 RPP25Q9BUL9 199 aaKnown RBP14.45□□□□□ -0.1
MRPL55-228ENST00000476267 BHMT2Q9H2M3 363 aa14.45□□□□□ -0.1
MRPL55-228ENST00000476267 TBC1D17Q9HA65 648 aa14.45□□□□□ -0.1
MRPL55-228ENST00000476267 POLD4Q9HCU8 107 aa14.45□□□□□ -0.1
MRPL55-228ENST00000476267 PTPRHQ9HD43 1115 aa14.45□□□□□ -0.1
MRPL55-228ENST00000476267 MTRRQ9UBK8 725 aa14.45□□□□□ -0.1
MRPL55-228ENST00000476267 CA14Q9ULX7 337 aa14.45□□□□□ -0.1
MRPL55-228ENST00000476267 FRYLO94915 3013 aa14.44□□□□□ -0.1
MRPL55-228ENST00000476267 FSHRP23945 695 aa14.44□□□□□ -0.1
MRPL55-228ENST00000476267 TOB1P50616 345 aaPredicted RBP14.44□□□□□ -0.1
MRPL55-228ENST00000476267 CLCNKBP51801 687 aa14.44□□□□□ -0.1
MRPL55-228ENST00000476267 EFNA5P52803 228 aa14.44□□□□□ -0.1
MRPL55-228ENST00000476267 SOX4Q06945 474 aaPredicted RBP14.44□□□□□ -0.1
MRPL55-228ENST00000476267 NBR1Q14596 966 aa14.44□□□□□ -0.1
MRPL55-228ENST00000476267 UPP1Q16831 310 aa14.44□□□□□ -0.1
MRPL55-228ENST00000476267 GLRA4Q5JXX5 417 aa14.44□□□□□ -0.1
MRPL55-228ENST00000476267 ATF7IP2Q5U623 682 aa14.44□□□□□ -0.1
MRPL55-228ENST00000476267 PDXDC1Q6P996 788 aa14.44□□□□□ -0.1
MRPL55-228ENST00000476267 PARM1Q6UWI2 310 aa14.44□□□□□ -0.1
MRPL55-228ENST00000476267 ALKAL1Q6UXT8 129 aa14.44□□□□□ -0.1
MRPL55-228ENST00000476267 TAS1R3Q7RTX0 852 aa14.44□□□□□ -0.1
MRPL55-228ENST00000476267 CEP57Q86XR8 500 aa14.44□□□□□ -0.1
MRPL55-228ENST00000476267 DAW1Q8N136 415 aa14.44□□□□□ -0.1
MRPL55-228ENST00000476267 CEP120Q8N960 986 aa14.44□□□□□ -0.1
MRPL55-228ENST00000476267 KIFAP3Q92845 792 aa14.44□□□□□ -0.1
MRPL55-228ENST00000476267 KIF2CQ99661 725 aa14.44□□□□□ -0.1
MRPL55-228ENST00000476267 ARHGEF3Q9NR81 526 aa14.44□□□□□ -0.1
MRPL55-228ENST00000476267 CDH7Q9ULB5 785 aa14.44□□□□□ -0.1
MRPL55-228ENST00000476267 TNFSF13BQ9Y275 285 aa14.44□□□□□ -0.1
MRPL55-228ENST00000476267 GDAQ9Y2T3 454 aa14.44□□□□□ -0.1
MRPL55-228ENST00000476267 FANCMQ8IYD8 2048 aa14.44□□□□□ -0.1
MRPL55-228ENST00000476267 COL4A2P08572 1712 aa14.44□□□□□ -0.1
MRPL55-228ENST00000476267 PHLPP2Q6ZVD8 1323 aa14.43□□□□□ -0.1
MRPL55-228ENST00000476267 DNAH14Q0VDD8 3507 aa14.43□□□□□ -0.1
MRPL55-228ENST00000476267 ABLIM1O14639 778 aa14.43□□□□□ -0.1
MRPL55-228ENST00000476267 MEFVO15553 781 aaPredicted RBP14.43□□□□□ -0.1
MRPL55-228ENST00000476267 U2AF2P26368 475 aaKnown RBP eCLIP14.43□□□□□ -0.12e-8■□□□□ 10
MRPL55-228ENST00000476267 CCT6AP40227 531 aaKnown RBP14.43□□□□□ -0.1
MRPL55-228ENST00000476267 STARD6P59095 220 aa14.43□□□□□ -0.1
MRPL55-228ENST00000476267 PDIA5Q14554 519 aa14.43□□□□□ -0.1
MRPL55-228ENST00000476267 PPM1LQ5SGD2 360 aa14.43□□□□□ -0.1
MRPL55-228ENST00000476267 LIN9Q5TKA1 542 aa14.43□□□□□ -0.1
MRPL55-228ENST00000476267 ST13P5Q8NFI4 369 aaPredicted RBP14.43□□□□□ -0.1
MRPL55-228ENST00000476267 SLC7A14Q8TBB6 771 aa14.43□□□□□ -0.1
MRPL55-228ENST00000476267 FGF13Q92913 245 aa14.43□□□□□ -0.1
MRPL55-228ENST00000476267 DDX27Q96GQ7 796 aaKnown RBP14.43□□□□□ -0.1
MRPL55-228ENST00000476267 CDT1Q9H211 546 aa14.43□□□□□ -0.1
MRPL55-228ENST00000476267 GOLGA2P5Q9HBQ8 144 aa14.43□□□□□ -0.1
MRPL55-228ENST00000476267 ARHGAP28Q9P2N2 729 aa14.43□□□□□ -0.1
MRPL55-228ENST00000476267 LRWD1Q9UFC0 647 aa14.43□□□□□ -0.1
MRPL55-228ENST00000476267 BACE2Q9Y5Z0 518 aa14.43□□□□□ -0.1
MRPL55-228ENST00000476267 DMXL1Q9Y485 3027 aa14.42□□□□□ -0.1
MRPL55-228ENST00000476267 SMIM28A0A1B0GU29 152 aa14.42□□□□□ -0.1
MRPL55-228ENST00000476267 CCL16O15467 120 aa14.42□□□□□ -0.1
MRPL55-228ENST00000476267 NEFLP07196 543 aa14.42□□□□□ -0.1
MRPL55-228ENST00000476267 GLULP15104 373 aa14.42□□□□□ -0.1
MRPL55-228ENST00000476267 LIG1P18858 919 aa14.42□□□□□ -0.1
MRPL55-228ENST00000476267 PROZP22891 400 aa14.42□□□□□ -0.1
MRPL55-228ENST00000476267 TKTP29401 623 aaKnown RBP14.42□□□□□ -0.1
MRPL55-228ENST00000476267 OR1D2P34982 312 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms