RNA–Protein interactions for RNA: ENST00000475693.1

ATG4B-217, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 2,237 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-217ENST00000475693 IMPACTQ9P2X3 320 aa19.6■□□□□ 0.73
ATG4B-217ENST00000475693 PAXBP1Q9Y5B6 917 aa19.6■□□□□ 0.73
ATG4B-217ENST00000475693 MEIS3P2A8K0S8 358 aa19.59■□□□□ 0.73
ATG4B-217ENST00000475693 MAPK13O15264 365 aa19.59■□□□□ 0.73
ATG4B-217ENST00000475693 LDHAP00338 332 aaKnown RBP19.59■□□□□ 0.73
ATG4B-217ENST00000475693 LPIN1Q14693 890 aa19.59■□□□□ 0.73
ATG4B-217ENST00000475693 PSMD6Q15008 389 aa19.59■□□□□ 0.73
ATG4B-217ENST00000475693 UBXN11Q5T124 520 aa19.59■□□□□ 0.73
ATG4B-217ENST00000475693 TRAF7Q6Q0C0 670 aa19.59■□□□□ 0.73
ATG4B-217ENST00000475693 TAS1R2Q8TE23 839 aa19.59■□□□□ 0.73
ATG4B-217ENST00000475693 FNBP1Q96RU3 617 aa19.59■□□□□ 0.73
ATG4B-217ENST00000475693 SIX2Q9NPC8 291 aa19.59■□□□□ 0.73
ATG4B-217ENST00000475693 ITIH6Q6UXX5 1313 aa19.59■□□□□ 0.73
ATG4B-217ENST00000475693 LACTBL1A8MY62 500 aa19.59■□□□□ 0.73
ATG4B-217ENST00000475693 PNMA6AP0CW24 399 aaPredicted RBP19.59■□□□□ 0.73
ATG4B-217ENST00000475693 POLR2FP61218 127 aaKnown RBP19.59■□□□□ 0.73
ATG4B-217ENST00000475693 FBXO47Q5MNV8 452 aa19.59■□□□□ 0.73
ATG4B-217ENST00000475693 BRSK2Q8IWQ3 736 aa19.59■□□□□ 0.73
ATG4B-217ENST00000475693 PAWRQ96IZ0 340 aaKnown RBP19.59■□□□□ 0.73
ATG4B-217ENST00000475693 KIAA1586Q9HCI6 787 aa19.59■□□□□ 0.73
ATG4B-217ENST00000475693 KLK14Q9P0G3 267 aa19.59■□□□□ 0.73
ATG4B-217ENST00000475693 PADI3Q9ULW8 664 aa19.59■□□□□ 0.73
ATG4B-217ENST00000475693 AKR1B15C9JRZ8 316 aaPredicted RBP19.58■□□□□ 0.73
ATG4B-217ENST00000475693 MGEA5O60502 916 aa19.58■□□□□ 0.73
ATG4B-217ENST00000475693 MCF2P10911 925 aa19.58■□□□□ 0.73
ATG4B-217ENST00000475693 KRT9P35527 623 aa19.58■□□□□ 0.73
ATG4B-217ENST00000475693 PTPN11Q06124 597 aaPredicted RBP19.58■□□□□ 0.73
ATG4B-217ENST00000475693 DMTNQ08495 405 aa19.58■□□□□ 0.73
ATG4B-217ENST00000475693 SLC10A6Q3KNW5 377 aa19.58■□□□□ 0.73
ATG4B-217ENST00000475693 E4F1Q66K89 784 aaPredicted RBP19.58■□□□□ 0.73
ATG4B-217ENST00000475693 NOTUMQ6P988 496 aa19.58■□□□□ 0.73
ATG4B-217ENST00000475693 SLC39A5Q6ZMH5 540 aa19.58■□□□□ 0.73
ATG4B-217ENST00000475693 GBP6Q6ZN66 633 aa19.58■□□□□ 0.73
ATG4B-217ENST00000475693 EFCAB13Q8IY85 973 aa19.58■□□□□ 0.73
ATG4B-217ENST00000475693 LMO3Q8TAP4 145 aa19.58■□□□□ 0.73
ATG4B-217ENST00000475693 TMC2Q8TDI7 906 aa19.58■□□□□ 0.73
ATG4B-217ENST00000475693 MFAP3LO75121 409 aa19.57■□□□□ 0.72
ATG4B-217ENST00000475693 MXI1P50539 228 aa19.57■□□□□ 0.72
ATG4B-217ENST00000475693 GUCY2FP51841 1108 aa19.57■□□□□ 0.72
ATG4B-217ENST00000475693 TRIM60Q495X7 471 aa19.57■□□□□ 0.72
ATG4B-217ENST00000475693 TDRD10Q5VZ19 366 aaKnown RBP19.57■□□□□ 0.72
ATG4B-217ENST00000475693 TWF2Q6IBS0 349 aaKnown RBP19.57■□□□□ 0.72
ATG4B-217ENST00000475693 SLC27A1Q6PCB7 646 aa19.57■□□□□ 0.72
ATG4B-217ENST00000475693 TRIM65Q6PJ69 517 aa19.57■□□□□ 0.72
ATG4B-217ENST00000475693 RPAINQ86UA6 219 aa19.57■□□□□ 0.72
ATG4B-217ENST00000475693 TSC1Q92574 1164 aa19.57■□□□□ 0.72
ATG4B-217ENST00000475693 ADPGKQ9BRR6 497 aa19.57■□□□□ 0.72
ATG4B-217ENST00000475693 INTS2Q9H0H0 1204 aaKnown RBP19.57■□□□□ 0.72
ATG4B-217ENST00000475693 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.57■□□□□ 0.729e-9■■□□□ 12.8
ATG4B-217ENST00000475693 FHOD1Q9Y613 1164 aa19.57■□□□□ 0.72
ATG4B-217ENST00000475693 NFICP08651 508 aa19.57■□□□□ 0.72
ATG4B-217ENST00000475693 GJA8P48165 433 aa19.57■□□□□ 0.72
ATG4B-217ENST00000475693 TFAMQ00059 246 aaKnown RBP19.57■□□□□ 0.72
ATG4B-217ENST00000475693 NCBP1Q09161 790 aaKnown RBP19.57■□□□□ 0.72
ATG4B-217ENST00000475693 PKN2Q16513 984 aaKnown RBP19.57■□□□□ 0.72
ATG4B-217ENST00000475693 RRAGAQ7L523 313 aa19.57■□□□□ 0.72
ATG4B-217ENST00000475693 NEK11Q8NG66 645 aa19.57■□□□□ 0.72
ATG4B-217ENST00000475693 MTMR12Q9C0I1 747 aa19.57■□□□□ 0.72
ATG4B-217ENST00000475693 MCOLN1Q9GZU1 580 aa19.57■□□□□ 0.72
ATG4B-217ENST00000475693 TMX1Q9H3N1 280 aa19.57■□□□□ 0.72
ATG4B-217ENST00000475693 RPF1Q9H9Y2 349 aaKnown RBP19.57■□□□□ 0.72
ATG4B-217ENST00000475693 CST3P01034 146 aaPredicted RBP19.56■□□□□ 0.72
ATG4B-217ENST00000475693 CD4P01730 458 aa19.56■□□□□ 0.72
ATG4B-217ENST00000475693 ZSCAN20P17040 1043 aaPredicted RBP19.56■□□□□ 0.72
ATG4B-217ENST00000475693 CCZ1BP86790 482 aa19.56■□□□□ 0.72
ATG4B-217ENST00000475693 CCZ1P86791 482 aaPredicted RBP19.56■□□□□ 0.72
ATG4B-217ENST00000475693 PPP2R3AQ06190 1150 aa19.56■□□□□ 0.72
ATG4B-217ENST00000475693 KLHDC7AQ5VTJ3 777 aa19.56■□□□□ 0.72
ATG4B-217ENST00000475693 PHLDB3Q6NSJ2 640 aa19.56■□□□□ 0.72
ATG4B-217ENST00000475693 KAT5Q92993 513 aa19.56■□□□□ 0.72
ATG4B-217ENST00000475693 TRIM6Q9C030 488 aaPredicted RBP19.56■□□□□ 0.72
ATG4B-217ENST00000475693 GANQ9H2C0 597 aa19.56■□□□□ 0.72
ATG4B-217ENST00000475693 CAPN11Q9UMQ6 739 aa19.56■□□□□ 0.72
ATG4B-217ENST00000475693 KIAA0391O15091 583 aaKnown RBP19.56■□□□□ 0.72
ATG4B-217ENST00000475693 VNN1O95497 513 aa19.56■□□□□ 0.72
ATG4B-217ENST00000475693 C4BPAP04003 597 aaKnown RBP19.56■□□□□ 0.72
ATG4B-217ENST00000475693 TLE2Q04725 743 aa19.56■□□□□ 0.72
ATG4B-217ENST00000475693 BIRC3Q13489 604 aa19.56■□□□□ 0.72
ATG4B-217ENST00000475693 EPC2Q52LR7 807 aa19.56■□□□□ 0.72
ATG4B-217ENST00000475693 GLRA4Q5JXX5 417 aa19.56■□□□□ 0.72
ATG4B-217ENST00000475693 JADE1Q6IE81 842 aa19.56■□□□□ 0.72
ATG4B-217ENST00000475693 SPOPLQ6IQ16 392 aa19.56■□□□□ 0.72
ATG4B-217ENST00000475693 ARHGEF19Q8IW93 802 aa19.56■□□□□ 0.72
ATG4B-217ENST00000475693 LPPQ93052 612 aa19.56■□□□□ 0.72
ATG4B-217ENST00000475693 LUC7L2Q9Y383 392 aaKnown RBP19.56■□□□□ 0.72
ATG4B-217ENST00000475693 AFF1P51825 1210 aaKnown RBP19.55■□□□□ 0.72
ATG4B-217ENST00000475693 GPNMBQ14956 572 aa19.55■□□□□ 0.72
ATG4B-217ENST00000475693 KRT39Q6A163 491 aa19.55■□□□□ 0.72
ATG4B-217ENST00000475693 SMG8Q8ND04 991 aaKnown RBP19.55■□□□□ 0.72
ATG4B-217ENST00000475693 EHBP1Q8NDI1 1231 aa19.55■□□□□ 0.72
ATG4B-217ENST00000475693 BAP1Q92560 729 aa19.55■□□□□ 0.72
ATG4B-217ENST00000475693 TATDN2Q93075 761 aa19.55■□□□□ 0.72
ATG4B-217ENST00000475693 SCLYQ96I15 445 aa19.55■□□□□ 0.72
ATG4B-217ENST00000475693 ACAP3Q96P50 834 aa19.55■□□□□ 0.72
ATG4B-217ENST00000475693 PPP1R12CQ9BZL4 782 aa19.55■□□□□ 0.72
ATG4B-217ENST00000475693 TMEM8AQ9HCN3 771 aa19.55■□□□□ 0.72
ATG4B-217ENST00000475693 ATP11BQ9Y2G3 1177 aa19.55■□□□□ 0.72
ATG4B-217ENST00000475693 TRIP11Q15643 1979 aa19.55■□□□□ 0.72
ATG4B-217ENST00000475693 CLTAP09496 248 aa19.55■□□□□ 0.72
ATG4B-217ENST00000475693 UCHL3P15374 230 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms