RNA–Protein interactions for RNA: ENST00000475657.1

FAM3A-218, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 585 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-218ENST00000475657 HES2Q9Y543 173 aa15.52■□□□□ 0.08
FAM3A-218ENST00000475657 SNX14Q9Y5W7 946 aa15.52■□□□□ 0.08
FAM3A-218ENST00000475657 TSPAN1O60635 241 aa15.51■□□□□ 0.07
FAM3A-218ENST00000475657 DKC1O60832 514 aaKnown RBP eCLIP15.51■□□□□ 0.07
FAM3A-218ENST00000475657 HOXB3P14651 431 aaPredicted RBP15.51■□□□□ 0.07
FAM3A-218ENST00000475657 KCNA4P22459 653 aa15.51■□□□□ 0.07
FAM3A-218ENST00000475657 RFC5P40937 340 aa15.51■□□□□ 0.07
FAM3A-218ENST00000475657 MLLT6P55198 1093 aaPredicted RBP15.51■□□□□ 0.07
FAM3A-218ENST00000475657 ANAPC15P60006 121 aa15.51■□□□□ 0.07
FAM3A-218ENST00000475657 TANGO2Q6ICL3 276 aa15.51■□□□□ 0.07
FAM3A-218ENST00000475657 LONP2Q86WA8 852 aa15.51■□□□□ 0.07
FAM3A-218ENST00000475657 IFNLR1Q8IU57 520 aaPredicted RBP15.51■□□□□ 0.07
FAM3A-218ENST00000475657 SPEM1Q8N4L4 309 aa15.51■□□□□ 0.07
FAM3A-218ENST00000475657 KDF1Q8NAX2 398 aaPredicted RBP15.51■□□□□ 0.07
FAM3A-218ENST00000475657 RNF149Q8NC42 400 aa15.51■□□□□ 0.07
FAM3A-218ENST00000475657 TCP11Q8WWU5 503 aa15.51■□□□□ 0.07
FAM3A-218ENST00000475657 FAM3CQ92520 227 aa15.51■□□□□ 0.07
FAM3A-218ENST00000475657 IRF7Q92985 503 aa15.51■□□□□ 0.07
FAM3A-218ENST00000475657 HCFC1R1Q9NWW0 138 aa15.51■□□□□ 0.07
FAM3A-218ENST00000475657 NOTCH4Q99466 2003 aa15.51■□□□□ 0.07
FAM3A-218ENST00000475657 RALGAPA1Q6GYQ0 2036 aa15.5■□□□□ 0.07
FAM3A-218ENST00000475657 CYP3A7-CYP3A51PA0A087WV96 503 aa15.5■□□□□ 0.07
FAM3A-218ENST00000475657 CCDC196A0A1B0GTZ2 297 aa15.5■□□□□ 0.07
FAM3A-218ENST00000475657 HMGB1P09429 215 aaKnown RBP15.5■□□□□ 0.07
FAM3A-218ENST00000475657 CHRNB1P11230 501 aa15.5■□□□□ 0.07
FAM3A-218ENST00000475657 CYP3A7P24462 503 aa15.5■□□□□ 0.07
FAM3A-218ENST00000475657 HOXA6P31267 233 aa15.5■□□□□ 0.07
FAM3A-218ENST00000475657 CCT2P78371 535 aaKnown RBP15.5■□□□□ 0.07
FAM3A-218ENST00000475657 SATB1Q01826 763 aa15.5■□□□□ 0.07
FAM3A-218ENST00000475657 POU5F1BQ06416 359 aa15.5■□□□□ 0.07
FAM3A-218ENST00000475657 ELAVL2Q12926 359 aaKnown RBP15.5■□□□□ 0.07
FAM3A-218ENST00000475657 FAM171A1Q5VUB5 890 aa15.5■□□□□ 0.07
FAM3A-218ENST00000475657 PLA2G4FQ68DD2 849 aa15.5■□□□□ 0.07
FAM3A-218ENST00000475657 FERMT3Q86UX7 667 aa15.5■□□□□ 0.07
FAM3A-218ENST00000475657 MAP4K3Q8IVH8 894 aa15.5■□□□□ 0.07
FAM3A-218ENST00000475657 GJA10Q969M2 543 aa15.5■□□□□ 0.07
FAM3A-218ENST00000475657 TMEM143Q96AN5 459 aa15.5■□□□□ 0.07
FAM3A-218ENST00000475657 MCRS1Q96EZ8 462 aa15.5■□□□□ 0.07
FAM3A-218ENST00000475657 LOXL4Q96JB6 756 aa15.5■□□□□ 0.07
FAM3A-218ENST00000475657 LARP6Q9BRS8 491 aaKnown RBP15.5■□□□□ 0.07
FAM3A-218ENST00000475657 BRD9Q9H8M2 597 aa15.5■□□□□ 0.07
FAM3A-218ENST00000475657 SPEGQ15772 3267 aa15.49■□□□□ 0.07
FAM3A-218ENST00000475657 CHURC1-FNTBB4DL54 471 aa15.49■□□□□ 0.07
FAM3A-218ENST00000475657 ADAM12O43184 909 aa15.49■□□□□ 0.07
FAM3A-218ENST00000475657 MICAL2O94851 1124 aa15.49■□□□□ 0.07
FAM3A-218ENST00000475657 ZNF806P0C7X5 589 aa15.49■□□□□ 0.07
FAM3A-218ENST00000475657 FCARP24071 287 aa15.49■□□□□ 0.07
FAM3A-218ENST00000475657 QARSP47897 775 aaKnown RBP15.49■□□□□ 0.07
FAM3A-218ENST00000475657 FNTBP49356 437 aa15.49■□□□□ 0.07
FAM3A-218ENST00000475657 NPEPPSP55786 919 aa15.49■□□□□ 0.07
FAM3A-218ENST00000475657 PTENP60484 403 aa15.49■□□□□ 0.07
FAM3A-218ENST00000475657 TUSC3Q13454 348 aa15.49■□□□□ 0.07
FAM3A-218ENST00000475657 AASDHQ4L235 1098 aaPredicted RBP15.49■□□□□ 0.07
FAM3A-218ENST00000475657 C1orf228Q6PIY5 440 aa15.49■□□□□ 0.07
FAM3A-218ENST00000475657 BLOC1S2Q6QNY1 142 aa15.49■□□□□ 0.07
FAM3A-218ENST00000475657 FAM160A2Q8N612 972 aaPredicted RBP15.49■□□□□ 0.07
FAM3A-218ENST00000475657 ING5Q8WYH8 240 aa15.49■□□□□ 0.07
FAM3A-218ENST00000475657 CEP170P1Q96L14 293 aa15.49■□□□□ 0.07
FAM3A-218ENST00000475657 TRMT61BQ9BVS5 477 aaKnown RBP15.49■□□□□ 0.07
FAM3A-218ENST00000475657 TRIM6Q9C030 488 aaPredicted RBP15.49■□□□□ 0.07
FAM3A-218ENST00000475657 NXF3Q9H4D5 531 aaKnown RBP15.49■□□□□ 0.07
FAM3A-218ENST00000475657 NCOA5Q9HCD5 579 aaKnown RBP15.49■□□□□ 0.07
FAM3A-218ENST00000475657 ZFP14Q9HCL3 533 aa15.49■□□□□ 0.07
FAM3A-218ENST00000475657 ZMIZ1Q9ULJ6 1067 aa15.49■□□□□ 0.07
FAM3A-218ENST00000475657 SDK1Q7Z5N4 2213 aa15.48■□□□□ 0.07
FAM3A-218ENST00000475657 K7ESF4 209 aa15.48■□□□□ 0.07
FAM3A-218ENST00000475657 PRPF3O43395 683 aaKnown RBP15.48■□□□□ 0.07
FAM3A-218ENST00000475657 RHOP08100 348 aa15.48■□□□□ 0.07
FAM3A-218ENST00000475657 RPS6KB1P23443 525 aa15.48■□□□□ 0.07
FAM3A-218ENST00000475657 GAS6Q14393 721 aa15.48■□□□□ 0.07
FAM3A-218ENST00000475657 MXD4Q14582 209 aaPredicted RBP15.48■□□□□ 0.07
FAM3A-218ENST00000475657 SLC5A9Q2M3M2 681 aa15.48■□□□□ 0.07
FAM3A-218ENST00000475657 POTEHQ6S545 545 aa15.48■□□□□ 0.07
FAM3A-218ENST00000475657 UNQ6494/PRO21346Q6UXR6 183 aa15.48■□□□□ 0.07
FAM3A-218ENST00000475657 CEP57Q86XR8 500 aa15.48■□□□□ 0.07
FAM3A-218ENST00000475657 ZNF579Q8NAF0 562 aaKnown RBP15.48■□□□□ 0.07
FAM3A-218ENST00000475657 CCDC148Q8NFR7 591 aa15.48■□□□□ 0.07
FAM3A-218ENST00000475657 RABGGTAQ92696 567 aa15.48■□□□□ 0.07
FAM3A-218ENST00000475657 MSANTD3Q96H12 275 aa15.48■□□□□ 0.07
FAM3A-218ENST00000475657 PAAF1Q9BRP4 392 aa15.48■□□□□ 0.07
FAM3A-218ENST00000475657 APOL6Q9BWW8 343 aa15.48■□□□□ 0.07
FAM3A-218ENST00000475657 LSM14BQ9BX40 385 aaKnown RBP15.48■□□□□ 0.07
FAM3A-218ENST00000475657 SLC26A6Q9BXS9 759 aa15.48■□□□□ 0.07
FAM3A-218ENST00000475657 ZNF334Q9HCZ1 680 aaPredicted RBP15.48■□□□□ 0.07
FAM3A-218ENST00000475657 PIAS3Q9Y6X2 628 aa15.48■□□□□ 0.07
FAM3A-218ENST00000475657 TDRD15B5MCY1 1934 aaKnown RBP15.48■□□□□ 0.07
FAM3A-218ENST00000475657 KCNK5O95279 499 aa15.47■□□□□ 0.07
FAM3A-218ENST00000475657 PTPN2P17706 415 aa15.47■□□□□ 0.07
FAM3A-218ENST00000475657 AKAP5P24588 427 aa15.47■□□□□ 0.07
FAM3A-218ENST00000475657 OR1D2P34982 312 aa15.47■□□□□ 0.07
FAM3A-218ENST00000475657 AKAP17AQ02040 695 aaKnown RBP15.47■□□□□ 0.07
FAM3A-218ENST00000475657 SPIRE1Q08AE8 756 aa15.47■□□□□ 0.07
FAM3A-218ENST00000475657 SRSF5Q13243 272 aaKnown RBP15.47■□□□□ 0.07
FAM3A-218ENST00000475657 PTGDRQ13258 359 aa15.47■□□□□ 0.07
FAM3A-218ENST00000475657 AMHR2Q16671 573 aa15.47■□□□□ 0.07
FAM3A-218ENST00000475657 STPG1Q5TH74 334 aa15.47■□□□□ 0.07
FAM3A-218ENST00000475657 MOXD1Q6UVY6 613 aa15.47■□□□□ 0.07
FAM3A-218ENST00000475657 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.47■□□□□ 0.07
FAM3A-218ENST00000475657 C12orf50Q8NA57 414 aaPredicted RBP15.47■□□□□ 0.07
FAM3A-218ENST00000475657 ETNPPLQ8TBG4 499 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms