RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-215ENST00000475319 IMMTQ16891 758 aaKnown RBP6.43□□□□□ -1.38
ECHDC1-215ENST00000475319 BBS9Q3SYG4 887 aa6.43□□□□□ -1.38
ECHDC1-215ENST00000475319 WDR45BQ5MNZ6 344 aa6.43□□□□□ -1.38
ECHDC1-215ENST00000475319 DEPDC1Q5TB30 811 aa6.43□□□□□ -1.38
ECHDC1-215ENST00000475319 ARHGAP27Q6ZUM4 889 aa6.43□□□□□ -1.38
ECHDC1-215ENST00000475319 STRA8Q7Z7C7 330 aa6.43□□□□□ -1.38
ECHDC1-215ENST00000475319 SNX32Q86XE0 403 aa6.43□□□□□ -1.38
ECHDC1-215ENST00000475319 FAM20CQ8IXL6 584 aa6.43□□□□□ -1.38
ECHDC1-215ENST00000475319 CNBD1Q8NA66 436 aa6.43□□□□□ -1.38
ECHDC1-215ENST00000475319 TNFRSF25Q93038 417 aa6.43□□□□□ -1.38
ECHDC1-215ENST00000475319 PRAM1Q96QH2 718 aa6.43□□□□□ -1.38
ECHDC1-215ENST00000475319 MPHOSPH9Q99550 1183 aa6.43□□□□□ -1.38
ECHDC1-215ENST00000475319 HERC2P3Q9BVR0 1158 aa6.43□□□□□ -1.38
ECHDC1-215ENST00000475319 NRSN2Q9GZP1 204 aa6.43□□□□□ -1.38
ECHDC1-215ENST00000475319 ZCWPW1Q9H0M4 648 aa6.43□□□□□ -1.38
ECHDC1-215ENST00000475319 TPK1Q9H3S4 243 aa6.43□□□□□ -1.38
ECHDC1-215ENST00000475319 SOX17Q9H6I2 414 aaPredicted RBP6.43□□□□□ -1.38
ECHDC1-215ENST00000475319 INIPQ9NRY2 104 aa6.43□□□□□ -1.38
ECHDC1-215ENST00000475319 TCP11L1Q9NUJ3 509 aa6.43□□□□□ -1.38
ECHDC1-215ENST00000475319 PDP2Q9P2J9 529 aa6.43□□□□□ -1.38
ECHDC1-215ENST00000475319 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.43□□□□□ -1.38
ECHDC1-215ENST00000475319 HERC5Q9UII4 1024 aaKnown RBP6.43□□□□□ -1.38
ECHDC1-215ENST00000475319 ZNF180Q9UJW8 692 aa6.43□□□□□ -1.38
ECHDC1-215ENST00000475319 TRAF3IP3Q9Y228 551 aa6.43□□□□□ -1.38
ECHDC1-215ENST00000475319 L3MBTL1Q9Y468 752 aa6.43□□□□□ -1.38
ECHDC1-215ENST00000475319 EIF2AK4Q9P2K8 1649 aaKnown RBP6.43□□□□□ -1.38
ECHDC1-215ENST00000475319 MSH6P52701 1360 aa6.43□□□□□ -1.38
ECHDC1-215ENST00000475319 IQGAP1P46940 1657 aa6.42□□□□□ -1.38
ECHDC1-215ENST00000475319 TRBV23-1A0A0A0MS06 115 aa6.42□□□□□ -1.38
ECHDC1-215ENST00000475319 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.42□□□□□ -1.38
ECHDC1-215ENST00000475319 TRAV20A0A0B4J274 112 aa6.42□□□□□ -1.38
ECHDC1-215ENST00000475319 BTBD19C9JJ37 291 aa6.42□□□□□ -1.38
ECHDC1-215ENST00000475319 GOLGA8TH3BQL2 631 aa6.42□□□□□ -1.38
ECHDC1-215ENST00000475319 MATN2O00339 956 aa6.42□□□□□ -1.38
ECHDC1-215ENST00000475319 CPLX1O14810 134 aa6.42□□□□□ -1.38
ECHDC1-215ENST00000475319 HAT1O14929 419 aa6.42□□□□□ -1.38
ECHDC1-215ENST00000475319 KMOO15229 486 aa6.42□□□□□ -1.38
ECHDC1-215ENST00000475319 PRPF3O43395 683 aaKnown RBP6.42□□□□□ -1.38
ECHDC1-215ENST00000475319 ZNF862O60290 1169 aa6.42□□□□□ -1.38
ECHDC1-215ENST00000475319 N4BP1O75113 896 aaKnown RBP6.42□□□□□ -1.38
ECHDC1-215ENST00000475319 RPN1P04843 607 aaKnown RBP6.42□□□□□ -1.38
ECHDC1-215ENST00000475319 PGRP06401 933 aa6.42□□□□□ -1.38
ECHDC1-215ENST00000475319 CTSBP07858 339 aa6.42□□□□□ -1.38
ECHDC1-215ENST00000475319 GOLGA8HP0CJ92 632 aa6.42□□□□□ -1.38
ECHDC1-215ENST00000475319 SCG2P13521 617 aa6.42□□□□□ -1.38
ECHDC1-215ENST00000475319 RAG1P15918 1043 aa6.42□□□□□ -1.38
ECHDC1-215ENST00000475319 PTPN2P17706 415 aa6.42□□□□□ -1.38
ECHDC1-215ENST00000475319 ALAS2P22557 587 aa6.42□□□□□ -1.38
ECHDC1-215ENST00000475319 MAOBP27338 520 aa6.42□□□□□ -1.38
ECHDC1-215ENST00000475319 GRK4P32298 578 aa6.42□□□□□ -1.38
ECHDC1-215ENST00000475319 CSTF2P33240 577 aaKnown RBP eCLIP6.42□□□□□ -1.38
ECHDC1-215ENST00000475319 PDE6BP35913 854 aa6.42□□□□□ -1.38
ECHDC1-215ENST00000475319 ADH7P40394 386 aa6.42□□□□□ -1.38
ECHDC1-215ENST00000475319 MXI1P50539 228 aa6.42□□□□□ -1.38
ECHDC1-215ENST00000475319 DSTNP60981 165 aa6.42□□□□□ -1.38
ECHDC1-215ENST00000475319 AP2B1P63010 937 aa6.42□□□□□ -1.38
ECHDC1-215ENST00000475319 NRG1Q02297 640 aaPredicted RBP6.42□□□□□ -1.38
ECHDC1-215ENST00000475319 ADAM9Q13443 819 aa6.42□□□□□ -1.38
ECHDC1-215ENST00000475319 E2F2Q14209 437 aa6.42□□□□□ -1.38
ECHDC1-215ENST00000475319 ACAP1Q15027 740 aa6.42□□□□□ -1.38
ECHDC1-215ENST00000475319 NONOQ15233 471 aaKnown RBP eCLIP6.42□□□□□ -1.38
ECHDC1-215ENST00000475319 POU4F3Q15319 338 aa6.42□□□□□ -1.38
ECHDC1-215ENST00000475319 GRIK4Q16099 956 aa6.42□□□□□ -1.38
ECHDC1-215ENST00000475319 CRY1Q16526 586 aa6.42□□□□□ -1.38
ECHDC1-215ENST00000475319 SHROOM1Q2M3G4 852 aaPredicted RBP6.42□□□□□ -1.38
ECHDC1-215ENST00000475319 FKBP15Q5T1M5 1219 aa6.42□□□□□ -1.38
ECHDC1-215ENST00000475319 IL23RQ5VWK5 629 aa6.42□□□□□ -1.38
ECHDC1-215ENST00000475319 WDR93Q6P2C0 686 aa6.42□□□□□ -1.38
ECHDC1-215ENST00000475319 TXNDC11Q6PKC3 985 aa6.42□□□□□ -1.38
ECHDC1-215ENST00000475319 SLC51AQ86UW1 340 aa6.42□□□□□ -1.38
ECHDC1-215ENST00000475319 CHD1LQ86WJ1 897 aa6.42□□□□□ -1.38
ECHDC1-215ENST00000475319 C12orf40Q86WS4 652 aa6.42□□□□□ -1.38
ECHDC1-215ENST00000475319 IGSF22Q8N9C0 903 aa6.42□□□□□ -1.38
ECHDC1-215ENST00000475319 CFAP61Q8NHU2 1237 aa6.42□□□□□ -1.38
ECHDC1-215ENST00000475319 AZIN2Q96A70 460 aa6.42□□□□□ -1.38
ECHDC1-215ENST00000475319 HAUS1Q96CS2 278 aa6.42□□□□□ -1.38
ECHDC1-215ENST00000475319 IL17RAQ96F46 866 aa6.42□□□□□ -1.38
ECHDC1-215ENST00000475319 WDR89Q96FK6 387 aaPredicted RBP6.42□□□□□ -1.38
ECHDC1-215ENST00000475319 MED30Q96HR3 178 aa6.42□□□□□ -1.38
ECHDC1-215ENST00000475319 ZNF496Q96IT1 587 aaPredicted RBP6.42□□□□□ -1.38
ECHDC1-215ENST00000475319 HIC2Q96JB3 615 aa6.42□□□□□ -1.38
ECHDC1-215ENST00000475319 SH3GL2Q99962 352 aa6.42□□□□□ -1.38
ECHDC1-215ENST00000475319 SIKE1Q9BRV8 207 aa6.42□□□□□ -1.38
ECHDC1-215ENST00000475319 ABCG4Q9H172 646 aa6.42□□□□□ -1.38
ECHDC1-215ENST00000475319 CARD9Q9H257 536 aa6.42□□□□□ -1.38
ECHDC1-215ENST00000475319 KCTD5Q9NXV2 234 aa6.42□□□□□ -1.38
ECHDC1-215ENST00000475319 FAM184BQ9ULE4 1060 aa6.42□□□□□ -1.38
ECHDC1-215ENST00000475319 TSC22D4Q9Y3Q8 395 aa6.42□□□□□ -1.38
ECHDC1-215ENST00000475319 CSADQ9Y600 493 aa6.42□□□□□ -1.38
ECHDC1-215ENST00000475319 TACC3Q9Y6A5 838 aa6.42□□□□□ -1.38
ECHDC1-215ENST00000475319 OAS3Q9Y6K5 1087 aaKnown RBP6.42□□□□□ -1.38
ECHDC1-215ENST00000475319 ERVK-7P63135 1459 aa6.42□□□□□ -1.38
ECHDC1-215ENST00000475319 LRRC9Q6ZRR7 1453 aa6.42□□□□□ -1.38
ECHDC1-215ENST00000475319 MED1Q15648 1581 aaPredicted RBP6.42□□□□□ -1.38
ECHDC1-215ENST00000475319 MAST1Q9Y2H9 1570 aa6.42□□□□□ -1.38
ECHDC1-215ENST00000475319 DNAJC25-GNG10A0A024R161 153 aa6.41□□□□□ -1.38
ECHDC1-215ENST00000475319 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.41□□□□□ -1.38
ECHDC1-215ENST00000475319 C19orf81C9J6K1 198 aa6.41□□□□□ -1.38
ECHDC1-215ENST00000475319 FAM229AH3BQW9 127 aa6.41□□□□□ -1.38
ECHDC1-215ENST00000475319 MUSKO15146 869 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms