RNA–Protein interactions for RNA: ENST00000475189.1

SRM-204, Transcript of spermidine synthase, humanhuman

TSL 2

Gene SRM, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-204ENST00000475189 DDX53Q86TM3 631 aaKnown RBP17.72■□□□□ 0.43
SRM-204ENST00000475189 SNX27Q96L92 541 aa17.72■□□□□ 0.43
SRM-204ENST00000475189 PPP1R10Q96QC0 940 aaKnown RBP17.72■□□□□ 0.43
SRM-204ENST00000475189 VN1R3Q9BXE9 311 aa17.72■□□□□ 0.43
SRM-204ENST00000475189 MARCH5Q9NX47 278 aa17.72■□□□□ 0.43
SRM-204ENST00000475189 EXOC7Q9UPT5 735 aa17.72■□□□□ 0.43
SRM-204ENST00000475189 PRG3Q9Y2Y8 225 aaPredicted RBP17.72■□□□□ 0.43
SRM-204ENST00000475189 SPTBN5Q9NRC6 3674 aaKnown RBP17.72■□□□□ 0.43
SRM-204ENST00000475189 CUL9Q8IWT3 2517 aa17.71■□□□□ 0.43
SRM-204ENST00000475189 SMIM28A0A1B0GU29 152 aa17.71■□□□□ 0.43
SRM-204ENST00000475189 GOLGA6L4A6NEF3 574 aa17.71■□□□□ 0.43
SRM-204ENST00000475189 F8W810 466 aa17.71■□□□□ 0.43
SRM-204ENST00000475189 OGTO15294 1046 aa17.71■□□□□ 0.43
SRM-204ENST00000475189 PRPF6O94906 941 aaKnown RBP17.71■□□□□ 0.43
SRM-204ENST00000475189 CLTAP09496 248 aa17.71■□□□□ 0.43
SRM-204ENST00000475189 TNFSF9P41273 254 aa17.71■□□□□ 0.43
SRM-204ENST00000475189 SLC10A6Q3KNW5 377 aa17.71■□□□□ 0.43
SRM-204ENST00000475189 GLRA4Q5JXX5 417 aa17.71■□□□□ 0.43
SRM-204ENST00000475189 FAM26FQ5R3K3 315 aa17.71■□□□□ 0.43
SRM-204ENST00000475189 ZBTB41Q5SVQ8 909 aa17.71■□□□□ 0.43
SRM-204ENST00000475189 PDE12Q6L8Q7 609 aaKnown RBP17.71■□□□□ 0.43
SRM-204ENST00000475189 KRBA2Q6ZNG9 492 aa17.71■□□□□ 0.43
SRM-204ENST00000475189 ADGRD2Q7Z7M1 963 aa17.71■□□□□ 0.43
SRM-204ENST00000475189 MICAL1Q8TDZ2 1067 aa17.71■□□□□ 0.43
SRM-204ENST00000475189 RABGGTAQ92696 567 aa17.71■□□□□ 0.43
SRM-204ENST00000475189 PAAF1Q9BRP4 392 aa17.71■□□□□ 0.43
SRM-204ENST00000475189 MSTO1Q9BUK6 570 aa17.71■□□□□ 0.43
SRM-204ENST00000475189 CNTN3Q9P232 1028 aa17.71■□□□□ 0.43
SRM-204ENST00000475189 CACNG4Q9UBN1 327 aa17.71■□□□□ 0.43
SRM-204ENST00000475189 CASTOR2A6NHX0 329 aa17.7■□□□□ 0.42
SRM-204ENST00000475189 NR1I2O75469 434 aa17.7■□□□□ 0.42
SRM-204ENST00000475189 CXCL8P10145 99 aa17.7■□□□□ 0.42
SRM-204ENST00000475189 KCNE1P15382 129 aa17.7■□□□□ 0.42
SRM-204ENST00000475189 ADSSP30520 456 aa17.7■□□□□ 0.42
SRM-204ENST00000475189 HYAL1Q12794 435 aa17.7■□□□□ 0.42
SRM-204ENST00000475189 KYAT1Q16773 422 aa17.7■□□□□ 0.42
SRM-204ENST00000475189 PLPP4Q5VZY2 271 aa17.7■□□□□ 0.42
SRM-204ENST00000475189 SLFN12LQ6IEE8 588 aa17.7■□□□□ 0.42
SRM-204ENST00000475189 EPM2AIP1Q7L775 607 aaPredicted RBP17.7■□□□□ 0.42
SRM-204ENST00000475189 TMC7Q7Z402 723 aa17.7■□□□□ 0.42
SRM-204ENST00000475189 FMR1NBQ8N0W7 255 aaPredicted RBP17.7■□□□□ 0.42
SRM-204ENST00000475189 VPS52Q8N1B4 723 aa17.7■□□□□ 0.42
SRM-204ENST00000475189 ZMAT2Q96NC0 199 aaKnown RBP17.7■□□□□ 0.42
SRM-204ENST00000475189 TCF25Q9BQ70 676 aa17.7■□□□□ 0.42
SRM-204ENST00000475189 COLEC11Q9BWP8 271 aa17.7■□□□□ 0.42
SRM-204ENST00000475189 ZBP1Q9H171 429 aa17.7■□□□□ 0.42
SRM-204ENST00000475189 NGRNQ9NPE2 291 aaKnown RBP17.7■□□□□ 0.42
SRM-204ENST00000475189 ENTPD7Q9NQZ7 604 aa17.7■□□□□ 0.42
SRM-204ENST00000475189 HIDE1A8MVS5 230 aa17.69■□□□□ 0.42
SRM-204ENST00000475189 EIF3DO15371 548 aaKnown RBP eCLIP17.69■□□□□ 0.42
SRM-204ENST00000475189 EFEMP2O95967 443 aa17.69■□□□□ 0.42
SRM-204ENST00000475189 MYL1P05976 194 aa17.69■□□□□ 0.42
SRM-204ENST00000475189 PRR29P0C7W0 189 aa17.69■□□□□ 0.42
SRM-204ENST00000475189 GTF2F1P35269 517 aaKnown RBP eCLIP17.69■□□□□ 0.42
SRM-204ENST00000475189 HOXD13P35453 343 aa17.69■□□□□ 0.42
SRM-204ENST00000475189 SOX4Q06945 474 aaPredicted RBP17.69■□□□□ 0.42
SRM-204ENST00000475189 COL19A1Q14993 1142 aa17.69■□□□□ 0.42
SRM-204ENST00000475189 POSTNQ15063 836 aa17.69■□□□□ 0.42
SRM-204ENST00000475189 STXBP4Q6ZWJ1 553 aa17.69■□□□□ 0.42
SRM-204ENST00000475189 SYCP3Q8IZU3 236 aa17.69■□□□□ 0.42
SRM-204ENST00000475189 ENGASEQ8NFI3 743 aa17.69■□□□□ 0.42
SRM-204ENST00000475189 ZNF507Q8TCN5 953 aa17.69■□□□□ 0.42
SRM-204ENST00000475189 TMEM206Q9H813 350 aa17.69■□□□□ 0.42
SRM-204ENST00000475189 PLEKHA5Q9HAU0 1116 aa17.69■□□□□ 0.42
SRM-204ENST00000475189 CPSF3Q9UKF6 684 aaKnown RBP17.69■□□□□ 0.42
SRM-204ENST00000475189 AGO2Q9UKV8 859 aaKnown RBP17.69■□□□□ 0.42
SRM-204ENST00000475189 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.68■□□□□ 0.42
SRM-204ENST00000475189 TTC26A0AVF1 554 aa17.68■□□□□ 0.42
SRM-204ENST00000475189 ADRB2P07550 413 aa17.68■□□□□ 0.42
SRM-204ENST00000475189 NRIP1P48552 1158 aa17.68■□□□□ 0.42
SRM-204ENST00000475189 SNW1Q13573 536 aaKnown RBP17.68■□□□□ 0.42
SRM-204ENST00000475189 HSP90AA2PQ14568 343 aaPredicted RBP17.68■□□□□ 0.42
SRM-204ENST00000475189 ENOX2Q16206 610 aaKnown RBP17.68■□□□□ 0.42
SRM-204ENST00000475189 KMT5BQ4FZB7 885 aa17.68■□□□□ 0.42
SRM-204ENST00000475189 TAS1R1Q7RTX1 841 aa17.68■□□□□ 0.42
SRM-204ENST00000475189 RBM23Q86U06 439 aaKnown RBP17.68■□□□□ 0.42
SRM-204ENST00000475189 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.68■□□□□ 0.42
SRM-204ENST00000475189 RNF168Q8IYW5 571 aaPredicted RBP17.68■□□□□ 0.42
SRM-204ENST00000475189 POMGNT1Q8WZA1 660 aa17.68■□□□□ 0.42
SRM-204ENST00000475189 HLA-CQ95604 372 aa17.68■□□□□ 0.42
SRM-204ENST00000475189 PPP2R3CQ969Q6 453 aa17.68■□□□□ 0.42
SRM-204ENST00000475189 IGFLR1Q9H665 355 aa17.68■□□□□ 0.42
SRM-204ENST00000475189 RPF1Q9H9Y2 349 aaKnown RBP17.68■□□□□ 0.42
SRM-204ENST00000475189 GOLGA2P5Q9HBQ8 144 aa17.68■□□□□ 0.42
SRM-204ENST00000475189 SLC39A2Q9NP94 309 aa17.68■□□□□ 0.42
SRM-204ENST00000475189 THEGQ9P2T0 379 aa17.68■□□□□ 0.42
SRM-204ENST00000475189 STK39Q9UEW8 545 aa17.68■□□□□ 0.42
SRM-204ENST00000475189 ADAM28Q9UKQ2 775 aa17.68■□□□□ 0.42
SRM-204ENST00000475189 COG5Q9UP83 839 aa17.68■□□□□ 0.42
SRM-204ENST00000475189 VWA8A3KMH1 1905 aa17.67■□□□□ 0.42
SRM-204ENST00000475189 LACTBL1A8MY62 500 aa17.67■□□□□ 0.42
SRM-204ENST00000475189 CXCL14O95715 111 aa17.67■□□□□ 0.42
SRM-204ENST00000475189 SOD2P04179 222 aa17.67■□□□□ 0.42
SRM-204ENST00000475189 CTSAP10619 480 aa17.67■□□□□ 0.42
SRM-204ENST00000475189 GARTP22102 1010 aa17.67■□□□□ 0.42
SRM-204ENST00000475189 ACOT2P49753 483 aa17.67■□□□□ 0.42
SRM-204ENST00000475189 FAM160A1Q05DH4 1040 aa17.67■□□□□ 0.42
SRM-204ENST00000475189 DPYDQ12882 1025 aa17.67■□□□□ 0.42
SRM-204ENST00000475189 SMC1AQ14683 1233 aaKnown RBP17.67■□□□□ 0.42
SRM-204ENST00000475189 CRELD2Q6UXH1 353 aaPredicted RBP17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms