RNA–Protein interactions for RNA: ENST00000474543.5

NELFCD-204, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 5

Gene NELFCD, Length 2,047 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-204ENST00000474543 SLMAPQ14BN4 828 aa15.46■□□□□ 0.07
NELFCD-204ENST00000474543 TAX1BP1Q86VP1 789 aa15.46■□□□□ 0.07
NELFCD-204ENST00000474543 C12orf56Q8IXR9 622 aa15.46■□□□□ 0.07
NELFCD-204ENST00000474543 CCDC105Q8IYK2 499 aa15.46■□□□□ 0.07
NELFCD-204ENST00000474543 LRRC34Q8IZ02 419 aa15.46■□□□□ 0.07
NELFCD-204ENST00000474543 XXYLT1Q8NBI6 393 aa15.46■□□□□ 0.07
NELFCD-204ENST00000474543 KLRG1Q96E93 195 aa15.46■□□□□ 0.07
NELFCD-204ENST00000474543 SGSM3Q96HU1 749 aa15.46■□□□□ 0.07
NELFCD-204ENST00000474543 BTBD6Q96KE9 485 aa15.46■□□□□ 0.07
NELFCD-204ENST00000474543 ACCSQ96QU6 501 aa15.46■□□□□ 0.07
NELFCD-204ENST00000474543 WRNIP1Q96S55 665 aa15.46■□□□□ 0.07
NELFCD-204ENST00000474543 RIT2Q99578 217 aa15.46■□□□□ 0.07
NELFCD-204ENST00000474543 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.46■□□□□ 0.07
NELFCD-204ENST00000474543 ARHGEF10LQ9HCE6 1279 aa15.46■□□□□ 0.07
NELFCD-204ENST00000474543 ACP6Q9NPH0 428 aa15.46■□□□□ 0.07
NELFCD-204ENST00000474543 INTS9Q9NV88 658 aaKnown RBP15.46■□□□□ 0.07
NELFCD-204ENST00000474543 GEMIN8Q9NWZ8 242 aaKnown RBP15.46■□□□□ 0.07
NELFCD-204ENST00000474543 LARSQ9P2J5 1176 aaKnown RBP15.46■□□□□ 0.07
NELFCD-204ENST00000474543 PTPN22Q9Y2R2 807 aa15.46■□□□□ 0.07
NELFCD-204ENST00000474543 TMX2Q9Y320 296 aa15.46■□□□□ 0.07
NELFCD-204ENST00000474543 MRPL11Q9Y3B7 192 aaKnown RBP15.46■□□□□ 0.07
NELFCD-204ENST00000474543 DNAJC8O75937 253 aaPredicted RBP15.45■□□□□ 0.06
NELFCD-204ENST00000474543 SLCO1A2P46721 670 aa15.45■□□□□ 0.06
NELFCD-204ENST00000474543 KCNJ1P48048 391 aa15.45■□□□□ 0.06
NELFCD-204ENST00000474543 IRX3P78415 501 aaPredicted RBP15.45■□□□□ 0.06
NELFCD-204ENST00000474543 ALCAMQ13740 583 aa15.45■□□□□ 0.06
NELFCD-204ENST00000474543 AUHQ13825 339 aaKnown RBP15.45■□□□□ 0.06
NELFCD-204ENST00000474543 LDLRAD1Q5T700 205 aa15.45■□□□□ 0.06
NELFCD-204ENST00000474543 RGMBQ6NW40 437 aa15.45■□□□□ 0.06
NELFCD-204ENST00000474543 ANKRD13AQ8IZ07 590 aa15.45■□□□□ 0.06
NELFCD-204ENST00000474543 KREMEN1Q96MU8 473 aa15.45■□□□□ 0.06
NELFCD-204ENST00000474543 PRMT1Q99873 361 aaKnown RBP15.45■□□□□ 0.06
NELFCD-204ENST00000474543 MXRA8Q9BRK3 442 aa15.45■□□□□ 0.06
NELFCD-204ENST00000474543 NUP85Q9BW27 656 aa15.45■□□□□ 0.06
NELFCD-204ENST00000474543 TMEM117Q9H0C3 514 aa15.45■□□□□ 0.06
NELFCD-204ENST00000474543 CCDC134Q9H6E4 229 aa15.45■□□□□ 0.06
NELFCD-204ENST00000474543 HSPBP1Q9NZL4 362 aa15.45■□□□□ 0.06
NELFCD-204ENST00000474543 MTUS1Q9ULD2 1270 aa15.45■□□□□ 0.06
NELFCD-204ENST00000474543 USP20Q9Y2K6 914 aa15.45■□□□□ 0.06
NELFCD-204ENST00000474543 CYP26A1O43174 497 aa15.44■□□□□ 0.06
NELFCD-204ENST00000474543 TBC1D12O60347 775 aa15.44■□□□□ 0.06
NELFCD-204ENST00000474543 CYP1A2P05177 515 aa15.44■□□□□ 0.06
NELFCD-204ENST00000474543 FMO1Q01740 532 aa15.44■□□□□ 0.06
NELFCD-204ENST00000474543 SNCBQ16143 134 aa15.44■□□□□ 0.06
NELFCD-204ENST00000474543 CYP4F22Q6NT55 531 aa15.44■□□□□ 0.06
NELFCD-204ENST00000474543 CYFIP1Q7L576 1253 aa15.44■□□□□ 0.06
NELFCD-204ENST00000474543 SLC47A2Q86VL8 602 aa15.44■□□□□ 0.06
NELFCD-204ENST00000474543 FAM228AQ86W67 206 aa15.44■□□□□ 0.06
NELFCD-204ENST00000474543 ZNF564Q8TBZ8 553 aaPredicted RBP15.44■□□□□ 0.06
NELFCD-204ENST00000474543 HHIPL1Q96JK4 782 aa15.44■□□□□ 0.06
NELFCD-204ENST00000474543 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.44■□□□□ 0.062e-6■■■■■ 38.7
NELFCD-204ENST00000474543 HERC5Q9UII4 1024 aaKnown RBP15.44■□□□□ 0.06
NELFCD-204ENST00000474543 DBR1Q9UK59 544 aaKnown RBP15.44■□□□□ 0.06
NELFCD-204ENST00000474543 CSADQ9Y600 493 aa15.44■□□□□ 0.06
NELFCD-204ENST00000474543 RASGRF2O14827 1237 aa15.44■□□□□ 0.06
NELFCD-204ENST00000474543 PMM2O15305 246 aa15.44■□□□□ 0.06
NELFCD-204ENST00000474543 SPOPO43791 374 aa15.44■□□□□ 0.06
NELFCD-204ENST00000474543 ITGB5P18084 799 aa15.44■□□□□ 0.06
NELFCD-204ENST00000474543 MXI1P50539 228 aa15.44■□□□□ 0.06
NELFCD-204ENST00000474543 ITIH4Q14624 930 aa15.44■□□□□ 0.06
NELFCD-204ENST00000474543 MIER3Q7Z3K6 550 aa15.44■□□□□ 0.06
NELFCD-204ENST00000474543 ANKS4BQ8N8V4 417 aa15.44■□□□□ 0.06
NELFCD-204ENST00000474543 C12orf50Q8NA57 414 aaPredicted RBP15.44■□□□□ 0.06
NELFCD-204ENST00000474543 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.44■□□□□ 0.065e-12■□□□□ 8.3
NELFCD-204ENST00000474543 SLC10A4Q96EP9 437 aa15.44■□□□□ 0.06
NELFCD-204ENST00000474543 CLMNQ96JQ2 1002 aa15.44■□□□□ 0.06
NELFCD-204ENST00000474543 RUNDC3BQ96NL0 473 aa15.44■□□□□ 0.06
NELFCD-204ENST00000474543 MYCBPQ99417 103 aaPredicted RBP15.44■□□□□ 0.06
NELFCD-204ENST00000474543 MAPK13O15264 365 aa15.43■□□□□ 0.06
NELFCD-204ENST00000474543 P4HBP07237 508 aaKnown RBP15.43■□□□□ 0.06
NELFCD-204ENST00000474543 PLS3P13797 630 aa15.43■□□□□ 0.06
NELFCD-204ENST00000474543 RDXP35241 583 aaKnown RBP15.43■□□□□ 0.06
NELFCD-204ENST00000474543 MAP3K10Q02779 954 aa15.43■□□□□ 0.06
NELFCD-204ENST00000474543 ZNF568Q3ZCX4 644 aa15.43■□□□□ 0.06
NELFCD-204ENST00000474543 MFSD5Q6N075 450 aa15.43■□□□□ 0.06
NELFCD-204ENST00000474543 PPM1KQ8N3J5 372 aa15.43■□□□□ 0.06
NELFCD-204ENST00000474543 CHURC1Q8WUH1 139 aa15.43■□□□□ 0.06
NELFCD-204ENST00000474543 POP1Q99575 1024 aaKnown RBP15.43■□□□□ 0.06
NELFCD-204ENST00000474543 STMN4Q9H169 189 aaPredicted RBP15.43■□□□□ 0.06
NELFCD-204ENST00000474543 LRRC19Q9H756 370 aa15.43■□□□□ 0.06
NELFCD-204ENST00000474543 PKD2L1Q9P0L9 805 aa15.43■□□□□ 0.06
NELFCD-204ENST00000474543 TPX2Q9ULW0 747 aaKnown RBP15.43■□□□□ 0.06
NELFCD-204ENST00000474543 ZHX2Q9Y6X8 837 aa15.43■□□□□ 0.06
NELFCD-204ENST00000474543 ADRB2P07550 413 aa15.43■□□□□ 0.06
NELFCD-204ENST00000474543 MAP2K2P36507 400 aa15.43■□□□□ 0.06
NELFCD-204ENST00000474543 GTF2BQ00403 316 aa15.43■□□□□ 0.06
NELFCD-204ENST00000474543 SF3A3Q12874 501 aaKnown RBP eCLIP15.43■□□□□ 0.068e-7■■■■□ 21.7
NELFCD-204ENST00000474543 CNGA2Q16280 664 aa15.43■□□□□ 0.06
NELFCD-204ENST00000474543 HAUS6Q7Z4H7 955 aa15.43■□□□□ 0.06
NELFCD-204ENST00000474543 CCDC50Q8IVM0 306 aa15.43■□□□□ 0.06
NELFCD-204ENST00000474543 SHC3Q92529 594 aa15.43■□□□□ 0.06
NELFCD-204ENST00000474543 SEMA4DQ92854 862 aa15.43■□□□□ 0.06
NELFCD-204ENST00000474543 ZNF653Q96CK0 615 aa15.43■□□□□ 0.06
NELFCD-204ENST00000474543 CAPNS2Q96L46 248 aa15.43■□□□□ 0.06
NELFCD-204ENST00000474543 ELAC2Q9BQ52 826 aaKnown RBP15.43■□□□□ 0.06
NELFCD-204ENST00000474543 ELP3Q9H9T3 547 aa15.43■□□□□ 0.06
NELFCD-204ENST00000474543 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.43■□□□□ 0.06
NELFCD-204ENST00000474543 ZNF112Q9UJU3 913 aa15.43■□□□□ 0.06
NELFCD-204ENST00000474543 GTF3C4Q9UKN8 822 aa15.43■□□□□ 0.06
NELFCD-204ENST00000474543 GOLGA8IPA6NC78 632 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 101.3 ms