RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 HASPINQ8TF76 798 aa22.36■■□□□ 1.17
PDLIM4-206ENST00000474421 PIK3R5Q8WYR1 880 aa22.36■■□□□ 1.17
PDLIM4-206ENST00000474421 SMG7Q92540 1137 aaKnown RBP22.36■■□□□ 1.17
PDLIM4-206ENST00000474421 CDK5RAP3Q96JB5 506 aa22.36■■□□□ 1.17
PDLIM4-206ENST00000474421 UROC1Q96N76 676 aa22.36■■□□□ 1.17
PDLIM4-206ENST00000474421 ACO2Q99798 780 aaKnown RBP22.36■■□□□ 1.17
PDLIM4-206ENST00000474421 CCDC94Q9BW85 323 aaPredicted RBP22.36■■□□□ 1.17
PDLIM4-206ENST00000474421 WDR6Q9NNW5 1121 aaKnown RBP22.36■■□□□ 1.17
PDLIM4-206ENST00000474421 KCND2Q9NZV8 630 aa22.36■■□□□ 1.17
PDLIM4-206ENST00000474421 CACNG4Q9UBN1 327 aa22.36■■□□□ 1.17
PDLIM4-206ENST00000474421 KMT2EQ8IZD2 1858 aa22.35■■□□□ 1.17
PDLIM4-206ENST00000474421 VWA3AA6NCI4 1184 aa22.35■■□□□ 1.17
PDLIM4-206ENST00000474421 SLC26A4O43511 780 aa22.35■■□□□ 1.17
PDLIM4-206ENST00000474421 CD2BP2O95400 341 aaKnown RBP22.35■■□□□ 1.17
PDLIM4-206ENST00000474421 ASGR2P07307 311 aa22.35■■□□□ 1.17
PDLIM4-206ENST00000474421 GRM5P41594 1212 aa22.35■■□□□ 1.17
PDLIM4-206ENST00000474421 PTPN5P54829 565 aa22.35■■□□□ 1.17
PDLIM4-206ENST00000474421 ZNF568Q3ZCX4 644 aa22.35■■□□□ 1.17
PDLIM4-206ENST00000474421 RTP2Q5QGT7 225 aa22.35■■□□□ 1.17
PDLIM4-206ENST00000474421 LILRA6Q6PI73 481 aa22.35■■□□□ 1.17
PDLIM4-206ENST00000474421 TBC1D32Q96NH3 1257 aa22.35■■□□□ 1.17
PDLIM4-206ENST00000474421 NTPCRQ9BSD7 190 aaKnown RBP22.35■■□□□ 1.17
PDLIM4-206ENST00000474421 PIDD1Q9HB75 910 aa22.35■■□□□ 1.17
PDLIM4-206ENST00000474421 TMEM189-UBE2V1I3L0A0 370 aa22.34■■□□□ 1.17
PDLIM4-206ENST00000474421 RFPL2O75678 378 aa22.34■■□□□ 1.17
PDLIM4-206ENST00000474421 SPATA31D3P0C874 917 aa22.34■■□□□ 1.17
PDLIM4-206ENST00000474421 SMTNP53814 917 aa22.34■■□□□ 1.17
PDLIM4-206ENST00000474421 MAPK7Q13164 816 aa22.34■■□□□ 1.17
PDLIM4-206ENST00000474421 PSMD5Q16401 504 aa22.34■■□□□ 1.17
PDLIM4-206ENST00000474421 LARP1BQ659C4 914 aaKnown RBP22.34■■□□□ 1.17
PDLIM4-206ENST00000474421 DCLRE1AQ6PJP8 1040 aa22.34■■□□□ 1.17
PDLIM4-206ENST00000474421 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.34■■□□□ 1.17
PDLIM4-206ENST00000474421 SPATA31D4Q6ZUB0 917 aa22.34■■□□□ 1.17
PDLIM4-206ENST00000474421 KCNK18Q7Z418 384 aa22.34■■□□□ 1.17
PDLIM4-206ENST00000474421 CEP57Q86XR8 500 aa22.34■■□□□ 1.17
PDLIM4-206ENST00000474421 GLYCTKQ8IVS8 523 aa22.34■■□□□ 1.17
PDLIM4-206ENST00000474421 SYT2Q8N9I0 419 aaPredicted RBP22.34■■□□□ 1.17
PDLIM4-206ENST00000474421 FEZF2Q8TBJ5 459 aa22.34■■□□□ 1.17
PDLIM4-206ENST00000474421 SPIRE2Q8WWL2 714 aa22.34■■□□□ 1.17
PDLIM4-206ENST00000474421 AK8Q96MA6 479 aa22.34■■□□□ 1.17
PDLIM4-206ENST00000474421 PPP1R10Q96QC0 940 aaKnown RBP22.34■■□□□ 1.17
PDLIM4-206ENST00000474421 PTPRHQ9HD43 1115 aa22.34■■□□□ 1.17
PDLIM4-206ENST00000474421 IGSF9Q9P2J2 1179 aa22.34■■□□□ 1.17
PDLIM4-206ENST00000474421 CLUHO75153 1309 aa22.33■■□□□ 1.17
PDLIM4-206ENST00000474421 TRAPPC3O43617 180 aa22.33■■□□□ 1.17
PDLIM4-206ENST00000474421 BMP15O95972 392 aa22.33■■□□□ 1.17
PDLIM4-206ENST00000474421 MCF2P10911 925 aa22.33■■□□□ 1.17
PDLIM4-206ENST00000474421 RPL17P18621 184 aaKnown RBP22.33■■□□□ 1.17
PDLIM4-206ENST00000474421 AVPR2P30518 371 aa22.33■■□□□ 1.17
PDLIM4-206ENST00000474421 NUBP1P53384 320 aa22.33■■□□□ 1.17
PDLIM4-206ENST00000474421 STRN3Q13033 797 aa22.33■■□□□ 1.17
PDLIM4-206ENST00000474421 PRSS55Q6UWB4 352 aaPredicted RBP22.33■■□□□ 1.17
PDLIM4-206ENST00000474421 LNX1Q8TBB1 728 aaPredicted RBP22.33■■□□□ 1.17
PDLIM4-206ENST00000474421 ZNF707Q96C28 371 aaPredicted RBP22.33■■□□□ 1.17
PDLIM4-206ENST00000474421 TCHPQ9BT92 498 aa22.33■■□□□ 1.17
PDLIM4-206ENST00000474421 PRKD2Q9BZL6 878 aa22.33■■□□□ 1.17
PDLIM4-206ENST00000474421 CDT1Q9H211 546 aa22.33■■□□□ 1.17
PDLIM4-206ENST00000474421 CXCL16Q9H2A7 254 aa22.33■■□□□ 1.17
PDLIM4-206ENST00000474421 SLC38A7Q9NVC3 462 aa22.33■■□□□ 1.17
PDLIM4-206ENST00000474421 CITO14578 2027 aa22.33■■□□□ 1.16
PDLIM4-206ENST00000474421 SLC16A4O15374 487 aa22.32■■□□□ 1.16
PDLIM4-206ENST00000474421 B3GAT3O94766 335 aa22.32■■□□□ 1.16
PDLIM4-206ENST00000474421 MYBP10242 640 aa22.32■■□□□ 1.16
PDLIM4-206ENST00000474421 PLS3P13797 630 aa22.32■■□□□ 1.16
PDLIM4-206ENST00000474421 TDGQ13569 410 aa22.32■■□□□ 1.16
PDLIM4-206ENST00000474421 GLRA4Q5JXX5 417 aa22.32■■□□□ 1.16
PDLIM4-206ENST00000474421 IER5LQ5T953 404 aa22.32■■□□□ 1.16
PDLIM4-206ENST00000474421 LIN9Q5TKA1 542 aa22.32■■□□□ 1.16
PDLIM4-206ENST00000474421 MPZL3Q6UWV2 235 aa22.32■■□□□ 1.16
PDLIM4-206ENST00000474421 DDX27Q96GQ7 796 aaKnown RBP22.32■■□□□ 1.16
PDLIM4-206ENST00000474421 PNMA5Q96PV4 448 aa22.32■■□□□ 1.16
PDLIM4-206ENST00000474421 CLSTN3Q9BQT9 956 aa22.32■■□□□ 1.16
PDLIM4-206ENST00000474421 TARS2Q9BW92 718 aaKnown RBP22.32■■□□□ 1.16
PDLIM4-206ENST00000474421 IRF2BPLQ9H1B7 796 aa22.32■■□□□ 1.16
PDLIM4-206ENST00000474421 VWA8A3KMH1 1905 aa22.31■■□□□ 1.16
PDLIM4-206ENST00000474421 SMIM28A0A1B0GU29 152 aa22.31■■□□□ 1.16
PDLIM4-206ENST00000474421 H0YCG3 227 aa22.31■■□□□ 1.16
PDLIM4-206ENST00000474421 ZMYND10O75800 440 aa22.31■■□□□ 1.16
PDLIM4-206ENST00000474421 PLA2G4BP0C869 781 aa22.31■■□□□ 1.16
PDLIM4-206ENST00000474421 PROZP22891 400 aa22.31■■□□□ 1.16
PDLIM4-206ENST00000474421 GBP2P32456 591 aaPredicted RBP22.31■■□□□ 1.16
PDLIM4-206ENST00000474421 SLC12A3P55017 1021 aa22.31■■□□□ 1.16
PDLIM4-206ENST00000474421 UPP1Q16831 310 aa22.31■■□□□ 1.16
PDLIM4-206ENST00000474421 XKR4Q5GH76 650 aa22.31■■□□□ 1.16
PDLIM4-206ENST00000474421 ALKAL1Q6UXT8 129 aa22.31■■□□□ 1.16
PDLIM4-206ENST00000474421 TAS1R3Q7RTX0 852 aa22.31■■□□□ 1.16
PDLIM4-206ENST00000474421 BRAPQ7Z569 592 aa22.31■■□□□ 1.16
PDLIM4-206ENST00000474421 PRSS33Q8NF86 280 aa22.31■■□□□ 1.16
PDLIM4-206ENST00000474421 NXPE3Q969Y0 559 aa22.31■■□□□ 1.16
PDLIM4-206ENST00000474421 ACAP3Q96P50 834 aa22.31■■□□□ 1.16
PDLIM4-206ENST00000474421 KCNK12Q9HB15 430 aa22.31■■□□□ 1.16
PDLIM4-206ENST00000474421 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP22.31■■□□□ 1.16
PDLIM4-206ENST00000474421 EPS15L1Q9UBC2 864 aa22.31■■□□□ 1.16
PDLIM4-206ENST00000474421 FBXW11Q9UKB1 542 aa22.31■■□□□ 1.16
PDLIM4-206ENST00000474421 SFI1A8K8P3 1242 aa22.3■■□□□ 1.16
PDLIM4-206ENST00000474421 HNRNPA1P09651 372 aaKnown RBP eCLIP22.3■■□□□ 1.16
PDLIM4-206ENST00000474421 FGFR3P22607 806 aa22.3■■□□□ 1.16
PDLIM4-206ENST00000474421 CLCNKBP51801 687 aa22.3■■□□□ 1.16
PDLIM4-206ENST00000474421 VCPP55072 806 aaKnown RBP22.3■■□□□ 1.16
PDLIM4-206ENST00000474421 TMEM119Q4V9L6 283 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms