RNA–Protein interactions for RNA: ENST00000474036.1

FN1-219, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 1,058 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-219ENST00000474036 MIGA2Q7L4E1 593 aa6.21□□□□□ -1.42
FN1-219ENST00000474036 ANKRD23Q86SG2 305 aa6.21□□□□□ -1.42
FN1-219ENST00000474036 PLBD2Q8NHP8 589 aa6.21□□□□□ -1.42
FN1-219ENST00000474036 SMCR8Q8TEV9 937 aaPredicted RBP6.21□□□□□ -1.42
FN1-219ENST00000474036 COA7Q96BR5 231 aa6.21□□□□□ -1.42
FN1-219ENST00000474036 DNAJC7Q99615 494 aa6.21□□□□□ -1.42
FN1-219ENST00000474036 GPR20Q99678 358 aa6.21□□□□□ -1.42
FN1-219ENST00000474036 MEIS3Q99687 375 aa6.21□□□□□ -1.42
FN1-219ENST00000474036 LRFN3Q9BTN0 628 aa6.21□□□□□ -1.42
FN1-219ENST00000474036 STK31Q9BXU1 1019 aa6.21□□□□□ -1.42
FN1-219ENST00000474036 ZCCHC17Q9NP64 241 aaKnown RBP6.21□□□□□ -1.42
FN1-219ENST00000474036 PTPRCP08575 1304 aa6.21□□□□□ -1.42
FN1-219ENST00000474036 LOC285556D6RIA3 1793 aa6.21□□□□□ -1.42
FN1-219ENST00000474036 MYH2Q9UKX2 1941 aa6.21□□□□□ -1.42
FN1-219ENST00000474036 SMARCA5O60264 1052 aaPredicted RBP6.2□□□□□ -1.42
FN1-219ENST00000474036 STAT5AP42229 794 aa6.2□□□□□ -1.42
FN1-219ENST00000474036 MRE11P49959 708 aa6.2□□□□□ -1.42
FN1-219ENST00000474036 IFRD2Q12894 506 aaPredicted RBP6.2□□□□□ -1.42
FN1-219ENST00000474036 FAM209AQ5JX71 171 aa6.2□□□□□ -1.42
FN1-219ENST00000474036 CEP85Q6P2H3 762 aa6.2□□□□□ -1.42
FN1-219ENST00000474036 KCNT2Q6UVM3 1135 aa6.2□□□□□ -1.42
FN1-219ENST00000474036 CD300LDQ6UXZ3 194 aa6.2□□□□□ -1.42
FN1-219ENST00000474036 MIB1Q86YT6 1006 aa6.2□□□□□ -1.42
FN1-219ENST00000474036 Q8N1Y9 231 aa6.2□□□□□ -1.42
FN1-219ENST00000474036 ANKRD13CQ8N6S4 541 aa6.2□□□□□ -1.42
FN1-219ENST00000474036 ANKRD44Q8N8A2 993 aa6.2□□□□□ -1.42
FN1-219ENST00000474036 EXOC2Q96KP1 924 aa6.2□□□□□ -1.42
FN1-219ENST00000474036 ASB2Q96Q27 587 aa6.2□□□□□ -1.42
FN1-219ENST00000474036 C22orf23Q9BZE7 217 aa6.2□□□□□ -1.42
FN1-219ENST00000474036 SENP6Q9GZR1 1112 aaPredicted RBP6.2□□□□□ -1.42
FN1-219ENST00000474036 SLKQ9H2G2 1235 aaPredicted RBP6.2□□□□□ -1.42
FN1-219ENST00000474036 GREM2Q9H772 168 aa6.2□□□□□ -1.42
FN1-219ENST00000474036 CD209Q9NNX6 404 aa6.2□□□□□ -1.42
FN1-219ENST00000474036 CNOT11Q9UKZ1 510 aaKnown RBP6.2□□□□□ -1.42
FN1-219ENST00000474036 PALD1Q9ULE6 856 aa6.2□□□□□ -1.42
FN1-219ENST00000474036 ATP11BQ9Y2G3 1177 aa6.2□□□□□ -1.42
FN1-219ENST00000474036 TAF5LO75529 589 aa6.19□□□□□ -1.42
FN1-219ENST00000474036 TNFRSF1AP19438 455 aa6.19□□□□□ -1.42
FN1-219ENST00000474036 RPL13P26373 211 aaKnown RBP6.19□□□□□ -1.42
FN1-219ENST00000474036 IGHMBP2P38935 993 aaKnown RBP6.19□□□□□ -1.42
FN1-219ENST00000474036 MMP14P50281 582 aa6.19□□□□□ -1.42
FN1-219ENST00000474036 ITGA1P56199 1179 aa6.19□□□□□ -1.42
FN1-219ENST00000474036 MRPS5P82675 430 aaKnown RBP6.19□□□□□ -1.42
FN1-219ENST00000474036 BMS1Q14692 1282 aaKnown RBP6.19□□□□□ -1.42
FN1-219ENST00000474036 PRR31Q5SQ13 230 aa6.19□□□□□ -1.42
FN1-219ENST00000474036 CCDC30Q5VVM6 783 aa6.19□□□□□ -1.42
FN1-219ENST00000474036 ETV3LQ6ZN32 361 aa6.19□□□□□ -1.42
FN1-219ENST00000474036 DPH6Q7L8W6 267 aa6.19□□□□□ -1.42
FN1-219ENST00000474036 LILRB2Q8N423 598 aa6.19□□□□□ -1.42
FN1-219ENST00000474036 OTUD7AQ8TE49 926 aaPredicted RBP6.19□□□□□ -1.42
FN1-219ENST00000474036 PHF20Q9BVI0 1012 aa6.19□□□□□ -1.42
FN1-219ENST00000474036 SSBP3Q9BWW4 388 aaPredicted RBP6.19□□□□□ -1.42
FN1-219ENST00000474036 CDIP1Q9H305 208 aa6.19□□□□□ -1.42
FN1-219ENST00000474036 EPHX3Q9H6B9 360 aa6.19□□□□□ -1.42
FN1-219ENST00000474036 GPR27Q9NS67 375 aa6.19□□□□□ -1.42
FN1-219ENST00000474036 SMPD4Q9NXE4 827 aa6.19□□□□□ -1.42
FN1-219ENST00000474036 PPARGC1AQ9UBK2 798 aaKnown RBP6.19□□□□□ -1.42
FN1-219ENST00000474036 INVSQ9Y283 1065 aa6.19□□□□□ -1.42
FN1-219ENST00000474036 MYRFQ9Y2G1 1151 aa6.19□□□□□ -1.42
FN1-219ENST00000474036 X6R8D5 127 aa6.19□□□□□ -1.42
FN1-219ENST00000474036 A0A0G2JMZ2 1700 aa6.19□□□□□ -1.42
FN1-219ENST00000474036 TRBV23-1A0A0A0MS06 115 aa6.18□□□□□ -1.42
FN1-219ENST00000474036 HSP90B1P14625 803 aaKnown RBP6.18□□□□□ -1.42
FN1-219ENST00000474036 PPATQ06203 517 aa6.18□□□□□ -1.42
FN1-219ENST00000474036 LSAMPQ13449 338 aa6.18□□□□□ -1.42
FN1-219ENST00000474036 CR1LQ2VPA4 569 aa6.18□□□□□ -1.42
FN1-219ENST00000474036 BMP2KLQ5H9B9 411 aa6.18□□□□□ -1.42
FN1-219ENST00000474036 TMEM31Q5JXX7 168 aa6.18□□□□□ -1.42
FN1-219ENST00000474036 MFSD14BQ5SR56 506 aa6.18□□□□□ -1.42
FN1-219ENST00000474036 MCTP2Q6DN12 878 aa6.18□□□□□ -1.42
FN1-219ENST00000474036 ZNF804AQ7Z570 1209 aa6.18□□□□□ -1.42
FN1-219ENST00000474036 DCP2Q8IU60 420 aaKnown RBP6.18□□□□□ -1.42
FN1-219ENST00000474036 SCUBE1Q8IWY4 988 aa6.18□□□□□ -1.42
FN1-219ENST00000474036 KYQ8NBH2 561 aa6.18□□□□□ -1.42
FN1-219ENST00000474036 ATXN2LQ8WWM7 1075 aaKnown RBP6.18□□□□□ -1.42
FN1-219ENST00000474036 TRIB2Q92519 343 aa6.18□□□□□ -1.42
FN1-219ENST00000474036 BADQ92934 168 aa6.18□□□□□ -1.42
FN1-219ENST00000474036 TRMT2BQ96GJ1 504 aaKnown RBP6.18□□□□□ -1.42
FN1-219ENST00000474036 TMEM169Q96HH4 297 aa6.18□□□□□ -1.42
FN1-219ENST00000474036 CHAMP1Q96JM3 812 aa6.18□□□□□ -1.42
FN1-219ENST00000474036 RNPC3Q96LT9 517 aaKnown RBP6.18□□□□□ -1.42
FN1-219ENST00000474036 UIMC1Q96RL1 719 aa6.18□□□□□ -1.42
FN1-219ENST00000474036 MPHOSPH8Q99549 860 aa6.18□□□□□ -1.42
FN1-219ENST00000474036 CDC6Q99741 560 aa6.18□□□□□ -1.42
FN1-219ENST00000474036 PRDM12Q9H4Q4 367 aa6.18□□□□□ -1.42
FN1-219ENST00000474036 DCTPP1Q9H773 170 aa6.18□□□□□ -1.42
FN1-219ENST00000474036 TMOD2Q9NZR1 351 aa6.18□□□□□ -1.42
FN1-219ENST00000474036 SMCHD1A6NHR9 2005 aa6.18□□□□□ -1.42
FN1-219ENST00000474036 DDX3XO00571 662 aaKnown RBP eCLIP6.17□□□□□ -1.42
FN1-219ENST00000474036 MATN3O15232 486 aa6.17□□□□□ -1.42
FN1-219ENST00000474036 HMMRO75330 724 aa6.17□□□□□ -1.42
FN1-219ENST00000474036 CDC45O75419 566 aa6.17□□□□□ -1.42
FN1-219ENST00000474036 FRAT2O75474 233 aaPredicted RBP6.17□□□□□ -1.42
FN1-219ENST00000474036 PLATP00750 562 aa6.17□□□□□ -1.42
FN1-219ENST00000474036 PCCAP05165 728 aaPredicted RBP6.17□□□□□ -1.42
FN1-219ENST00000474036 C6orf222P0C671 652 aaPredicted RBP6.17□□□□□ -1.42
FN1-219ENST00000474036 CYP2B6P20813 491 aa6.17□□□□□ -1.42
FN1-219ENST00000474036 CCND3P30281 292 aaPredicted RBP6.17□□□□□ -1.42
FN1-219ENST00000474036 KCNQ1P51787 676 aa6.17□□□□□ -1.42
FN1-219ENST00000474036 SMAD3P84022 425 aaKnown RBP6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms