RNA–Protein interactions for RNA: ENST00000473911.1

CLIC3-201, Transcript of chloride intracellular channel 3, humanhuman

TSL 5

Gene CLIC3, Length 732 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC3-201ENST00000473911 SMTNP53814 917 aa17.1■□□□□ 0.33
CLIC3-201ENST00000473911 YARSP54577 528 aaKnown RBP17.1■□□□□ 0.33
CLIC3-201ENST00000473911 CREMQ03060 361 aa17.1■□□□□ 0.33
CLIC3-201ENST00000473911 STRN3Q13033 797 aa17.1■□□□□ 0.33
CLIC3-201ENST00000473911 MAPK7Q13164 816 aa17.1■□□□□ 0.33
CLIC3-201ENST00000473911 CUL4AQ13619 759 aa17.1■□□□□ 0.33
CLIC3-201ENST00000473911 SYT2Q8N9I0 419 aaPredicted RBP17.1■□□□□ 0.33
CLIC3-201ENST00000473911 TDRD5Q8NAT2 981 aaKnown RBP17.1■□□□□ 0.33
CLIC3-201ENST00000473911 RASSF8Q8NHQ8 419 aa17.1■□□□□ 0.33
CLIC3-201ENST00000473911 CALML4Q96GE6 196 aa17.1■□□□□ 0.33
CLIC3-201ENST00000473911 ACO2Q99798 780 aaKnown RBP17.1■□□□□ 0.33
CLIC3-201ENST00000473911 TCHPQ9BT92 498 aa17.1■□□□□ 0.33
CLIC3-201ENST00000473911 CCDC94Q9BW85 323 aaPredicted RBP17.1■□□□□ 0.33
CLIC3-201ENST00000473911 CXCL16Q9H2A7 254 aa17.1■□□□□ 0.33
CLIC3-201ENST00000473911 RXFP1Q9HBX9 757 aa17.1■□□□□ 0.33
CLIC3-201ENST00000473911 CHST7Q9NS84 486 aa17.1■□□□□ 0.33
CLIC3-201ENST00000473911 ARHGAP28Q9P2N2 729 aa17.1■□□□□ 0.33
CLIC3-201ENST00000473911 KCNG1Q9UIX4 513 aa17.1■□□□□ 0.33
CLIC3-201ENST00000473911 KIF4AO95239 1232 aa17.09■□□□□ 0.33
CLIC3-201ENST00000473911 MYBP10242 640 aa17.09■□□□□ 0.33
CLIC3-201ENST00000473911 PLS3P13797 630 aa17.09■□□□□ 0.33
CLIC3-201ENST00000473911 SLC12A3P55017 1021 aa17.09■□□□□ 0.33
CLIC3-201ENST00000473911 OSTNP61366 133 aa17.09■□□□□ 0.33
CLIC3-201ENST00000473911 TMEM119Q4V9L6 283 aa17.09■□□□□ 0.33
CLIC3-201ENST00000473911 GLRA4Q5JXX5 417 aa17.09■□□□□ 0.33
CLIC3-201ENST00000473911 GPR149Q86SP6 731 aa17.09■□□□□ 0.33
CLIC3-201ENST00000473911 CEP57Q86XR8 500 aa17.09■□□□□ 0.33
CLIC3-201ENST00000473911 PALB2Q86YC2 1186 aa17.09■□□□□ 0.33
CLIC3-201ENST00000473911 GLYCTKQ8IVS8 523 aa17.09■□□□□ 0.33
CLIC3-201ENST00000473911 TMEM105Q8N8V8 129 aa17.09■□□□□ 0.33
CLIC3-201ENST00000473911 TARS2Q9BW92 718 aaKnown RBP17.09■□□□□ 0.33
CLIC3-201ENST00000473911 CDT1Q9H211 546 aa17.09■□□□□ 0.33
CLIC3-201ENST00000473911 TOPORSQ9NS56 1045 aaPredicted RBP17.09■□□□□ 0.33
CLIC3-201ENST00000473911 KCND2Q9NZV8 630 aa17.09■□□□□ 0.33
CLIC3-201ENST00000473911 LIMD1Q9UGP4 676 aa17.09■□□□□ 0.33
CLIC3-201ENST00000473911 RIF1Q5UIP0 2472 aaKnown RBP17.08■□□□□ 0.33
CLIC3-201ENST00000473911 PTPRZ1P23471 2315 aaPredicted RBP17.08■□□□□ 0.33
CLIC3-201ENST00000473911 SLC26A4O43511 780 aa17.08■□□□□ 0.32
CLIC3-201ENST00000473911 SPATA31D3P0C874 917 aa17.08■□□□□ 0.32
CLIC3-201ENST00000473911 HARSP12081 509 aaKnown RBP17.08■□□□□ 0.32
CLIC3-201ENST00000473911 GRM5P41594 1212 aa17.08■□□□□ 0.32
CLIC3-201ENST00000473911 SF3A1Q15459 793 aaKnown RBP17.08■□□□□ 0.32
CLIC3-201ENST00000473911 FAM171A1Q5VUB5 890 aa17.08■□□□□ 0.32
CLIC3-201ENST00000473911 SPATA31D4Q6ZUB0 917 aa17.08■□□□□ 0.32
CLIC3-201ENST00000473911 CCDC149Q6ZUS6 474 aa17.08■□□□□ 0.32
CLIC3-201ENST00000473911 TAS1R3Q7RTX0 852 aa17.08■□□□□ 0.32
CLIC3-201ENST00000473911 SPIRE2Q8WWL2 714 aa17.08■□□□□ 0.32
CLIC3-201ENST00000473911 ATOH1Q92858 354 aaPredicted RBP17.08■□□□□ 0.32
CLIC3-201ENST00000473911 PRRX2Q99811 253 aa17.08■□□□□ 0.32
CLIC3-201ENST00000473911 TTPALQ9BTX7 342 aa17.08■□□□□ 0.32
CLIC3-201ENST00000473911 FNIP2Q9P278 1114 aa17.08■□□□□ 0.32
CLIC3-201ENST00000473911 NPHP3-ACAD11A0A0J9YXS1 232 aa17.07■□□□□ 0.32
CLIC3-201ENST00000473911 CCDC195A0A1B0GUA6 201 aa17.07■□□□□ 0.32
CLIC3-201ENST00000473911 GFRA3O60609 400 aa17.07■□□□□ 0.32
CLIC3-201ENST00000473911 MCF2P10911 925 aa17.07■□□□□ 0.32
CLIC3-201ENST00000473911 RPL17P18621 184 aaKnown RBP17.07■□□□□ 0.32
CLIC3-201ENST00000473911 LONP1P36776 959 aaKnown RBP17.07■□□□□ 0.32
CLIC3-201ENST00000473911 CACNB1Q02641 598 aaPredicted RBP17.07■□□□□ 0.32
CLIC3-201ENST00000473911 ELAVL2Q12926 359 aaKnown RBP17.07■□□□□ 0.32
CLIC3-201ENST00000473911 DHX8Q14562 1220 aaKnown RBP17.07■□□□□ 0.32
CLIC3-201ENST00000473911 NAB2Q15742 525 aa17.07■□□□□ 0.32
CLIC3-201ENST00000473911 RTP2Q5QGT7 225 aa17.07■□□□□ 0.32
CLIC3-201ENST00000473911 PRSS55Q6UWB4 352 aaPredicted RBP17.07■□□□□ 0.32
CLIC3-201ENST00000473911 MPZL3Q6UWV2 235 aa17.07■□□□□ 0.32
CLIC3-201ENST00000473911 C15orf39Q6ZRI6 1047 aa17.07■□□□□ 0.32
CLIC3-201ENST00000473911 GPBP1Q86WP2 473 aa17.07■□□□□ 0.32
CLIC3-201ENST00000473911 GPR65Q8IYL9 337 aa17.07■□□□□ 0.32
CLIC3-201ENST00000473911 CEP120Q8N960 986 aa17.07■□□□□ 0.32
CLIC3-201ENST00000473911 CMASQ8NFW8 434 aaPredicted RBP17.07■□□□□ 0.32
CLIC3-201ENST00000473911 ACSF2Q96CM8 615 aaPredicted RBP17.07■□□□□ 0.32
CLIC3-201ENST00000473911 NTPCRQ9BSD7 190 aaKnown RBP17.07■□□□□ 0.32
CLIC3-201ENST00000473911 BACH2Q9BYV9 841 aa17.07■□□□□ 0.32
CLIC3-201ENST00000473911 PTPRHQ9HD43 1115 aa17.07■□□□□ 0.32
CLIC3-201ENST00000473911 LARSQ9P2J5 1176 aaKnown RBP17.07■□□□□ 0.32
CLIC3-201ENST00000473911 ANKFY1Q9P2R3 1169 aa17.07■□□□□ 0.32
CLIC3-201ENST00000473911 SORCS3Q9UPU3 1222 aa17.07■□□□□ 0.32
CLIC3-201ENST00000473911 C2orf16Q68DN1 1984 aa17.07■□□□□ 0.32
CLIC3-201ENST00000473911 DENND4AQ7Z401 1863 aa17.07■□□□□ 0.32
CLIC3-201ENST00000473911 TGM5O43548 720 aa17.06■□□□□ 0.32
CLIC3-201ENST00000473911 B3GAT3O94766 335 aa17.06■□□□□ 0.32
CLIC3-201ENST00000473911 MATR3P43243 847 aaKnown RBP eCLIP17.06■□□□□ 0.32
CLIC3-201ENST00000473911 MTMR3Q13615 1198 aa17.06■□□□□ 0.32
CLIC3-201ENST00000473911 PLCD3Q8N3E9 789 aa17.06■□□□□ 0.32
CLIC3-201ENST00000473911 TMEM161BQ8NDZ6 487 aa17.06■□□□□ 0.32
CLIC3-201ENST00000473911 HDAC7Q8WUI4 952 aa17.06■□□□□ 0.32
CLIC3-201ENST00000473911 UROC1Q96N76 676 aa17.06■□□□□ 0.32
CLIC3-201ENST00000473911 ACAP3Q96P50 834 aa17.06■□□□□ 0.32
CLIC3-201ENST00000473911 PPP1R10Q96QC0 940 aaKnown RBP17.06■□□□□ 0.32
CLIC3-201ENST00000473911 PLEKHA4Q9H4M7 779 aa17.06■□□□□ 0.32
CLIC3-201ENST00000473911 USTQ9Y2C2 406 aa17.06■□□□□ 0.32
CLIC3-201ENST00000473911 SMIM28A0A1B0GU29 152 aa17.05■□□□□ 0.32
CLIC3-201ENST00000473911 H0YCG3 227 aa17.05■□□□□ 0.32
CLIC3-201ENST00000473911 GALR2O43603 387 aaPredicted RBP17.05■□□□□ 0.32
CLIC3-201ENST00000473911 RFPL2O75678 378 aa17.05■□□□□ 0.32
CLIC3-201ENST00000473911 KRT18P05783 430 aaKnown RBP17.05■□□□□ 0.32
CLIC3-201ENST00000473911 MAPTP10636 758 aaKnown RBP17.05■□□□□ 0.32
CLIC3-201ENST00000473911 PLCG1P19174 1290 aa17.05■□□□□ 0.32
CLIC3-201ENST00000473911 GRIN1Q05586 938 aa17.05■□□□□ 0.32
CLIC3-201ENST00000473911 KARSQ15046 597 aaKnown RBP17.05■□□□□ 0.32
CLIC3-201ENST00000473911 PSMD5Q16401 504 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms