RNA–Protein interactions for RNA: ENST00000473376.1

CHD3-209, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-209ENST00000473376 SNTG2Q9NY99 539 aa14.91□□□□□ -0.02
CHD3-209ENST00000473376 FBXL21Q9UKT6 434 aa14.91□□□□□ -0.02
CHD3-209ENST00000473376 KIF3AQ9Y496 699 aa14.91□□□□□ -0.02
CHD3-209ENST00000473376 BACE2Q9Y5Z0 518 aa14.91□□□□□ -0.02
CHD3-209ENST00000473376 TDRD15B5MCY1 1934 aaKnown RBP14.91□□□□□ -0.02
CHD3-209ENST00000473376 XYLBO75191 536 aa14.9□□□□□ -0.02
CHD3-209ENST00000473376 KIF4AO95239 1232 aa14.9□□□□□ -0.02
CHD3-209ENST00000473376 FGFR3P22607 806 aa14.9□□□□□ -0.02
CHD3-209ENST00000473376 CCT6AP40227 531 aaKnown RBP14.9□□□□□ -0.02
CHD3-209ENST00000473376 GNL2Q13823 731 aaKnown RBP14.9□□□□□ -0.02
CHD3-209ENST00000473376 PSMD5Q16401 504 aa14.9□□□□□ -0.02
CHD3-209ENST00000473376 TMEM132AQ24JP5 1023 aa14.9□□□□□ -0.02
CHD3-209ENST00000473376 LIN9Q5TKA1 542 aa14.9□□□□□ -0.02
CHD3-209ENST00000473376 ATF7IP2Q5U623 682 aa14.9□□□□□ -0.02
CHD3-209ENST00000473376 ALKAL1Q6UXT8 129 aa14.9□□□□□ -0.02
CHD3-209ENST00000473376 CCDC83Q8IWF9 413 aa14.9□□□□□ -0.02
CHD3-209ENST00000473376 KCNN1Q92952 543 aa14.9□□□□□ -0.02
CHD3-209ENST00000473376 DRC1Q96MC2 740 aa14.9□□□□□ -0.02
CHD3-209ENST00000473376 PPP1R10Q96QC0 940 aaKnown RBP14.9□□□□□ -0.02
CHD3-209ENST00000473376 MYADMQ96S97 322 aa14.9□□□□□ -0.02
CHD3-209ENST00000473376 KCNH3Q9ULD8 1083 aa14.9□□□□□ -0.02
CHD3-209ENST00000473376 DNM3Q9UQ16 869 aa14.9□□□□□ -0.02
CHD3-209ENST00000473376 A0A087WWV3 80 aa14.89□□□□□ -0.03
CHD3-209ENST00000473376 TTLL13PA6NNM8 815 aa14.89□□□□□ -0.03
CHD3-209ENST00000473376 SCP2P22307 547 aa14.89□□□□□ -0.03
CHD3-209ENST00000473376 GRM5P41594 1212 aa14.89□□□□□ -0.03
CHD3-209ENST00000473376 GUCY1B3Q02153 619 aa14.89□□□□□ -0.03
CHD3-209ENST00000473376 HTR4Q13639 388 aa14.89□□□□□ -0.03
CHD3-209ENST00000473376 UPP1Q16831 310 aa14.89□□□□□ -0.03
CHD3-209ENST00000473376 KRT79Q5XKE5 535 aa14.89□□□□□ -0.03
CHD3-209ENST00000473376 ANKS3Q6ZW76 656 aa14.89□□□□□ -0.03
CHD3-209ENST00000473376 MTSS1LQ765P7 747 aa14.89□□□□□ -0.03
CHD3-209ENST00000473376 SIX5Q8N196 739 aa14.89□□□□□ -0.03
CHD3-209ENST00000473376 FEZF2Q8TBJ5 459 aa14.89□□□□□ -0.03
CHD3-209ENST00000473376 PAAF1Q9BRP4 392 aa14.89□□□□□ -0.03
CHD3-209ENST00000473376 PTPRHQ9HD43 1115 aa14.89□□□□□ -0.03
CHD3-209ENST00000473376 AVENQ9NQS1 362 aaPredicted RBP14.89□□□□□ -0.03
CHD3-209ENST00000473376 KCND2Q9NZV8 630 aa14.89□□□□□ -0.03
CHD3-209ENST00000473376 ARHGAP28Q9P2N2 729 aa14.89□□□□□ -0.03
CHD3-209ENST00000473376 MTRRQ9UBK8 725 aa14.89□□□□□ -0.03
CHD3-209ENST00000473376 CDH7Q9ULB5 785 aa14.89□□□□□ -0.03
CHD3-209ENST00000473376 MAFFQ9ULX9 164 aa14.89□□□□□ -0.03
CHD3-209ENST00000473376 KIAA1024Q9UPX6 916 aa14.89□□□□□ -0.03
CHD3-209ENST00000473376 MTCL1Q9Y4B5 1905 aaKnown RBP14.88□□□□□ -0.03
CHD3-209ENST00000473376 C2orf16Q68DN1 1984 aa14.88□□□□□ -0.03
CHD3-209ENST00000473376 CASTOR2A6NHX0 329 aa14.88□□□□□ -0.03
CHD3-209ENST00000473376 SLC26A4O43511 780 aa14.88□□□□□ -0.03
CHD3-209ENST00000473376 B3GAT3O94766 335 aa14.88□□□□□ -0.03
CHD3-209ENST00000473376 SEC24BO95487 1268 aa14.88□□□□□ -0.03
CHD3-209ENST00000473376 SPATA31D3P0C874 917 aa14.88□□□□□ -0.03
CHD3-209ENST00000473376 FSHRP23945 695 aa14.88□□□□□ -0.03
CHD3-209ENST00000473376 RPL9P32969 192 aaKnown RBP14.88□□□□□ -0.03
CHD3-209ENST00000473376 YARSP54577 528 aaKnown RBP14.88□□□□□ -0.03
CHD3-209ENST00000473376 PTGDRQ13258 359 aa14.88□□□□□ -0.03
CHD3-209ENST00000473376 DMP1Q13316 513 aaPredicted RBP14.88□□□□□ -0.03
CHD3-209ENST00000473376 ECM1Q16610 540 aa14.88□□□□□ -0.03
CHD3-209ENST00000473376 PPM1LQ5SGD2 360 aa14.88□□□□□ -0.03
CHD3-209ENST00000473376 NT5DC1Q5TFE4 455 aa14.88□□□□□ -0.03
CHD3-209ENST00000473376 PRSS55Q6UWB4 352 aaPredicted RBP14.88□□□□□ -0.03
CHD3-209ENST00000473376 SPATA31D4Q6ZUB0 917 aa14.88□□□□□ -0.03
CHD3-209ENST00000473376 DTWD2Q8NBA8 298 aa14.88□□□□□ -0.03
CHD3-209ENST00000473376 FLCNQ8NFG4 579 aa14.88□□□□□ -0.03
CHD3-209ENST00000473376 SHDQ96IW2 340 aa14.88□□□□□ -0.03
CHD3-209ENST00000473376 B3GALT6Q96L58 329 aa14.88□□□□□ -0.03
CHD3-209ENST00000473376 ACO2Q99798 780 aaKnown RBP14.88□□□□□ -0.03
CHD3-209ENST00000473376 CCDC94Q9BW85 323 aaPredicted RBP14.88□□□□□ -0.03
CHD3-209ENST00000473376 MRPL4Q9BYD3 311 aaKnown RBP14.88□□□□□ -0.03
CHD3-209ENST00000473376 DDX19AQ9NUU7 478 aaKnown RBP14.88□□□□□ -0.03
CHD3-209ENST00000473376 ZFHX2Q9C0A1 2572 aaPredicted RBP14.87□□□□□ -0.03
CHD3-209ENST00000473376 C8AP07357 584 aa14.87□□□□□ -0.03
CHD3-209ENST00000473376 MCF2P10911 925 aa14.87□□□□□ -0.03
CHD3-209ENST00000473376 KCNE1P15382 129 aa14.87□□□□□ -0.03
CHD3-209ENST00000473376 RPL17P18621 184 aaKnown RBP14.87□□□□□ -0.03
CHD3-209ENST00000473376 PROZP22891 400 aa14.87□□□□□ -0.03
CHD3-209ENST00000473376 GUCY2CP25092 1073 aa14.87□□□□□ -0.03
CHD3-209ENST00000473376 NPTX2P47972 431 aa14.87□□□□□ -0.03
CHD3-209ENST00000473376 TOB1P50616 345 aaPredicted RBP14.87□□□□□ -0.03
CHD3-209ENST00000473376 FOSBP53539 338 aa14.87□□□□□ -0.03
CHD3-209ENST00000473376 RILPL1Q5EBL4 403 aa14.87□□□□□ -0.03
CHD3-209ENST00000473376 HYIQ5T013 277 aa14.87□□□□□ -0.03
CHD3-209ENST00000473376 EEF1DP3Q658K8 133 aa14.87□□□□□ -0.03
CHD3-209ENST00000473376 RSPO2Q6UXX9 243 aaPredicted RBP14.87□□□□□ -0.03
CHD3-209ENST00000473376 DTHD1Q6ZMT9 781 aa14.87□□□□□ -0.03
CHD3-209ENST00000473376 CEP57Q86XR8 500 aa14.87□□□□□ -0.03
CHD3-209ENST00000473376 SNX29Q8TEQ0 813 aa14.87□□□□□ -0.03
CHD3-209ENST00000473376 SPIRE2Q8WWL2 714 aa14.87□□□□□ -0.03
CHD3-209ENST00000473376 NKD2Q969F2 451 aaPredicted RBP14.87□□□□□ -0.03
CHD3-209ENST00000473376 KIF2CQ99661 725 aa14.87□□□□□ -0.03
CHD3-209ENST00000473376 USP34Q70CQ2 3546 aa14.87□□□□□ -0.03
CHD3-209ENST00000473376 PLXNA3P51805 1871 aa14.86□□□□□ -0.03
CHD3-209ENST00000473376 SMIM28A0A1B0GU29 152 aa14.86□□□□□ -0.03
CHD3-209ENST00000473376 KRBA1A5PL33 1030 aa14.86□□□□□ -0.03
CHD3-209ENST00000473376 PRR23AA6NEV1 266 aa14.86□□□□□ -0.03
CHD3-209ENST00000473376 H0YCG3 227 aa14.86□□□□□ -0.03
CHD3-209ENST00000473376 SYN3O14994 580 aa14.86□□□□□ -0.03
CHD3-209ENST00000473376 MICAL2O94851 1124 aa14.86□□□□□ -0.03
CHD3-209ENST00000473376 EDN1P05305 212 aa14.86□□□□□ -0.03
CHD3-209ENST00000473376 STARD6P59095 220 aa14.86□□□□□ -0.03
CHD3-209ENST00000473376 FOXK2Q01167 660 aa14.86□□□□□ -0.03
CHD3-209ENST00000473376 ARL6IP4Q66PJ3 421 aaKnown RBP14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms