RNA–Protein interactions for RNA: ENST00000473214.1

RTF1-203, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene RTF1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-203ENST00000473214 MECOMQ03112 1051 aa6.6□□□□□ -1.35
RTF1-203ENST00000473214 GALNT1Q10472 559 aaPredicted RBP6.6□□□□□ -1.35
RTF1-203ENST00000473214 PMS2P11Q13670 270 aa6.6□□□□□ -1.35
RTF1-203ENST00000473214 ERV3-1Q14264 604 aa6.6□□□□□ -1.35
RTF1-203ENST00000473214 PLS1Q14651 629 aa6.6□□□□□ -1.35
RTF1-203ENST00000473214 CPSF6Q16630 551 aaKnown RBP eCLIP6.6□□□□□ -1.35
RTF1-203ENST00000473214 PFKFB4Q16877 469 aa6.6□□□□□ -1.35
RTF1-203ENST00000473214 BBS9Q3SYG4 887 aa6.6□□□□□ -1.35
RTF1-203ENST00000473214 ZACNQ401N2 412 aa6.6□□□□□ -1.35
RTF1-203ENST00000473214 ANKDD1AQ495B1 522 aa6.6□□□□□ -1.35
RTF1-203ENST00000473214 SGO2Q562F6 1265 aa6.6□□□□□ -1.35
RTF1-203ENST00000473214 BROXQ5VW32 411 aa6.6□□□□□ -1.35
RTF1-203ENST00000473214 JMJD6Q6NYC1 403 aaPredicted RBP6.6□□□□□ -1.35
RTF1-203ENST00000473214 SHQ1Q6PI26 577 aaKnown RBP6.6□□□□□ -1.35
RTF1-203ENST00000473214 KDELC1Q6UW63 502 aa6.6□□□□□ -1.35
RTF1-203ENST00000473214 CBLL1Q75N03 491 aa6.6□□□□□ -1.35
RTF1-203ENST00000473214 MAMDC2Q7Z304 686 aaPredicted RBP6.6□□□□□ -1.35
RTF1-203ENST00000473214 CCDC33Q8N5R6 958 aa6.6□□□□□ -1.35
RTF1-203ENST00000473214 GIMAP7Q8NHV1 300 aa6.6□□□□□ -1.35
RTF1-203ENST00000473214 BRSK1Q8TDC3 778 aa6.6□□□□□ -1.35
RTF1-203ENST00000473214 ZNF606Q8WXB4 792 aa6.6□□□□□ -1.35
RTF1-203ENST00000473214 ARHGEF2Q92974 986 aaKnown RBP6.6□□□□□ -1.35
RTF1-203ENST00000473214 ZNF845Q96IR2 970 aaPredicted RBP6.6□□□□□ -1.35
RTF1-203ENST00000473214 C7orf26Q96N11 449 aa6.6□□□□□ -1.35
RTF1-203ENST00000473214 GSDMAQ96QA5 445 aa6.6□□□□□ -1.35
RTF1-203ENST00000473214 EYA3Q99504 573 aa6.6□□□□□ -1.35
RTF1-203ENST00000473214 OSMRQ99650 979 aa6.6□□□□□ -1.35
RTF1-203ENST00000473214 ACAD9Q9H845 621 aa6.6□□□□□ -1.35
RTF1-203ENST00000473214 PREBQ9HCU5 417 aa6.6□□□□□ -1.35
RTF1-203ENST00000473214 CCDC177Q9NQR7 707 aaPredicted RBP6.6□□□□□ -1.35
RTF1-203ENST00000473214 KIF17Q9P2E2 1029 aa6.6□□□□□ -1.35
RTF1-203ENST00000473214 APEX2Q9UBZ4 518 aa6.6□□□□□ -1.35
RTF1-203ENST00000473214 RPS6KA6Q9UK32 745 aa6.6□□□□□ -1.35
RTF1-203ENST00000473214 FAM184BQ9ULE4 1060 aa6.6□□□□□ -1.35
RTF1-203ENST00000473214 SOX13Q9UN79 622 aa6.6□□□□□ -1.35
RTF1-203ENST00000473214 SRPK3Q9UPE1 567 aa6.6□□□□□ -1.35
RTF1-203ENST00000473214 TRAF6Q9Y4K3 522 aa6.6□□□□□ -1.35
RTF1-203ENST00000473214 ANGPTL3Q9Y5C1 460 aa6.6□□□□□ -1.35
RTF1-203ENST00000473214 MAST1Q9Y2H9 1570 aa6.6□□□□□ -1.35
RTF1-203ENST00000473214 ABCC3O15438 1527 aa6.6□□□□□ -1.35
RTF1-203ENST00000473214 SLIT1O75093 1534 aa6.6□□□□□ -1.35
RTF1-203ENST00000473214 KIAA1107Q9UPP5 1409 aa6.59□□□□□ -1.35
RTF1-203ENST00000473214 MROH1Q8NDA8 1641 aa6.59□□□□□ -1.35
RTF1-203ENST00000473214 CFAP65Q6ZU64 1925 aaKnown RBP6.59□□□□□ -1.35
RTF1-203ENST00000473214 POM121BA6NF01 834 aa6.59□□□□□ -1.35
RTF1-203ENST00000473214 SLC22A31A6NKX4 558 aa6.59□□□□□ -1.35
RTF1-203ENST00000473214 C2orf81A6NN90 581 aa6.59□□□□□ -1.35
RTF1-203ENST00000473214 SLC7A4O43246 635 aa6.59□□□□□ -1.35
RTF1-203ENST00000473214 GAS2O43903 313 aaKnown RBP6.59□□□□□ -1.35
RTF1-203ENST00000473214 TP53P04637 393 aaPredicted RBP6.59□□□□□ -1.35
RTF1-203ENST00000473214 ADRB2P07550 413 aa6.59□□□□□ -1.35
RTF1-203ENST00000473214 SFTPCP11686 197 aa6.59□□□□□ -1.35
RTF1-203ENST00000473214 NME2P22392 152 aa6.59□□□□□ -1.35
RTF1-203ENST00000473214 HTR1BP28222 390 aa6.59□□□□□ -1.35
RTF1-203ENST00000473214 HOXC12P31275 282 aa6.59□□□□□ -1.35
RTF1-203ENST00000473214 HOXD13P35453 343 aa6.59□□□□□ -1.35
RTF1-203ENST00000473214 GPR3P46089 330 aa6.59□□□□□ -1.35
RTF1-203ENST00000473214 HSPA7P48741 367 aa6.59□□□□□ -1.35
RTF1-203ENST00000473214 ALDH9A1P49189 494 aa6.59□□□□□ -1.35
RTF1-203ENST00000473214 IL1RL1Q01638 556 aa6.59□□□□□ -1.35
RTF1-203ENST00000473214 ZNF543Q08ER8 600 aa6.59□□□□□ -1.35
RTF1-203ENST00000473214 C19orf57Q0VDD7 668 aa6.59□□□□□ -1.35
RTF1-203ENST00000473214 MAPK7Q13164 816 aa6.59□□□□□ -1.35
RTF1-203ENST00000473214 MYBPC3Q14896 1274 aa6.59□□□□□ -1.35
RTF1-203ENST00000473214 SMAD2Q15796 467 aaKnown RBP6.59□□□□□ -1.35
RTF1-203ENST00000473214 TIGD6Q17RP2 521 aa6.59□□□□□ -1.35
RTF1-203ENST00000473214 FAM110CQ1W6H9 321 aa6.59□□□□□ -1.35
RTF1-203ENST00000473214 WSCD2Q2TBF2 565 aa6.59□□□□□ -1.35
RTF1-203ENST00000473214 UAP1L1Q3KQV9 507 aa6.59□□□□□ -1.35
RTF1-203ENST00000473214 RPS26P11Q5JNZ5 115 aaPredicted RBP6.59□□□□□ -1.35
RTF1-203ENST00000473214 FBXO47Q5MNV8 452 aa6.59□□□□□ -1.35
RTF1-203ENST00000473214 ZNF362Q5T0B9 420 aaPredicted RBP6.59□□□□□ -1.35
RTF1-203ENST00000473214 LCE4AQ5TA78 99 aa6.59□□□□□ -1.35
RTF1-203ENST00000473214 MEX3CQ5U5Q3 659 aaKnown RBP6.59□□□□□ -1.35
RTF1-203ENST00000473214 ZNF772Q68DY9 489 aaPredicted RBP6.59□□□□□ -1.35
RTF1-203ENST00000473214 RAB12Q6IQ22 244 aa6.59□□□□□ -1.35
RTF1-203ENST00000473214 LBX2Q6XYB7 198 aa6.59□□□□□ -1.35
RTF1-203ENST00000473214 TTLL7Q6ZT98 887 aa6.59□□□□□ -1.35
RTF1-203ENST00000473214 CEP97Q8IW35 865 aa6.59□□□□□ -1.35
RTF1-203ENST00000473214 UNC45BQ8IWX7 931 aa6.59□□□□□ -1.35
RTF1-203ENST00000473214 LRRC71Q8N4P6 559 aa6.59□□□□□ -1.35
RTF1-203ENST00000473214 IGSF22Q8N9C0 903 aa6.59□□□□□ -1.35
RTF1-203ENST00000473214 SPC24Q8NBT2 197 aa6.59□□□□□ -1.35
RTF1-203ENST00000473214 ZNF540Q8NDQ6 660 aa6.59□□□□□ -1.35
RTF1-203ENST00000473214 RFFLQ8WZ73 363 aa6.59□□□□□ -1.35
RTF1-203ENST00000473214 ASIC4Q96FT7 647 aa6.59□□□□□ -1.35
RTF1-203ENST00000473214 PYM1Q9BRP8 204 aaKnown RBP6.59□□□□□ -1.35
RTF1-203ENST00000473214 TMPRSS13Q9BYE2 586 aa6.59□□□□□ -1.35
RTF1-203ENST00000473214 ZNF576Q9H609 170 aa6.59□□□□□ -1.35
RTF1-203ENST00000473214 RPAP3Q9H6T3 665 aaPredicted RBP6.59□□□□□ -1.35
RTF1-203ENST00000473214 CNTD2Q9H8S5 307 aa6.59□□□□□ -1.35
RTF1-203ENST00000473214 SPON1Q9HCB6 807 aa6.59□□□□□ -1.35
RTF1-203ENST00000473214 PAPOLBQ9NRJ5 636 aaKnown RBP6.59□□□□□ -1.35
RTF1-203ENST00000473214 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.59□□□□□ -1.35
RTF1-203ENST00000473214 CCM2LQ9NUG4 571 aaPredicted RBP6.59□□□□□ -1.35
RTF1-203ENST00000473214 C6orf203Q9P0P8 240 aaPredicted RBP6.59□□□□□ -1.35
RTF1-203ENST00000473214 CGNQ9P2M7 1197 aaKnown RBP6.59□□□□□ -1.35
RTF1-203ENST00000473214 LAMP5Q9UJQ1 280 aa6.59□□□□□ -1.35
RTF1-203ENST00000473214 ARHGAP26Q9UNA1 814 aa6.59□□□□□ -1.35
RTF1-203ENST00000473214 ANGEL1Q9UNK9 670 aaKnown RBP6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms