RNA–Protein interactions for RNA: ENST00000472911.1

SMTN-215, Transcript of smoothelin, humanhuman

TSL 2

Gene SMTN, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-215ENST00000472911 ZC3H11AO75152 810 aaKnown RBP eCLIP13.21□□□□□ -0.29
SMTN-215ENST00000472911 DDHD2O94830 711 aa13.21□□□□□ -0.29
SMTN-215ENST00000472911 PRPF6O94906 941 aaKnown RBP13.21□□□□□ -0.29
SMTN-215ENST00000472911 ITGB1P05556 798 aa13.21□□□□□ -0.29
SMTN-215ENST00000472911 KCNA5P22460 613 aa13.21□□□□□ -0.29
SMTN-215ENST00000472911 RNASELQ05823 741 aaKnown RBP13.21□□□□□ -0.29
SMTN-215ENST00000472911 FAM160A1Q05DH4 1040 aa13.21□□□□□ -0.29
SMTN-215ENST00000472911 ALCAMQ13740 583 aa13.21□□□□□ -0.29
SMTN-215ENST00000472911 SEZ6Q53EL9 994 aa13.21□□□□□ -0.29
SMTN-215ENST00000472911 KCNT2Q6UVM3 1135 aa13.21□□□□□ -0.29
SMTN-215ENST00000472911 EPM2AIP1Q7L775 607 aaPredicted RBP13.21□□□□□ -0.29
SMTN-215ENST00000472911 THNSL1Q8IYQ7 743 aa13.21□□□□□ -0.29
SMTN-215ENST00000472911 KLHL23Q8NBE8 558 aa13.21□□□□□ -0.29
SMTN-215ENST00000472911 P2RX5Q93086 422 aa13.21□□□□□ -0.29
SMTN-215ENST00000472911 ZNF558Q96NG5 402 aa13.21□□□□□ -0.29
SMTN-215ENST00000472911 ACCSQ96QU6 501 aa13.21□□□□□ -0.29
SMTN-215ENST00000472911 C11orf84Q9BUA3 381 aaPredicted RBP13.21□□□□□ -0.29
SMTN-215ENST00000472911 GBP3Q9H0R5 595 aa13.21□□□□□ -0.29
SMTN-215ENST00000472911 AAASQ9NRG9 546 aa13.21□□□□□ -0.29
SMTN-215ENST00000472911 KANSL3Q9P2N6 904 aa13.21□□□□□ -0.29
SMTN-215ENST00000472911 PLAGL2Q9UPG8 496 aa13.21□□□□□ -0.29
SMTN-215ENST00000472911 PCDHB13Q9Y5F0 798 aa13.21□□□□□ -0.29
SMTN-215ENST00000472911 PCDHB12Q9Y5F1 795 aa13.21□□□□□ -0.29
SMTN-215ENST00000472911 A0A0B4J269 797 aa13.2□□□□□ -0.3
SMTN-215ENST00000472911 GRM6O15303 877 aa13.2□□□□□ -0.3
SMTN-215ENST00000472911 DCXO43602 365 aa13.2□□□□□ -0.3
SMTN-215ENST00000472911 FAM189A1O60320 539 aa13.2□□□□□ -0.3
SMTN-215ENST00000472911 NR1I2O75469 434 aa13.2□□□□□ -0.3
SMTN-215ENST00000472911 MYL1P05976 194 aa13.2□□□□□ -0.3
SMTN-215ENST00000472911 HOXD13P35453 343 aa13.2□□□□□ -0.3
SMTN-215ENST00000472911 MATR3P43243 847 aaKnown RBP eCLIP13.2□□□□□ -0.3
SMTN-215ENST00000472911 BCAR1P56945 870 aa13.2□□□□□ -0.3
SMTN-215ENST00000472911 DSC1Q08554 894 aa13.2□□□□□ -0.3
SMTN-215ENST00000472911 DPYDQ12882 1025 aa13.2□□□□□ -0.3
SMTN-215ENST00000472911 KMT5BQ4FZB7 885 aa13.2□□□□□ -0.3
SMTN-215ENST00000472911 ZBTB41Q5SVQ8 909 aa13.2□□□□□ -0.3
SMTN-215ENST00000472911 PTCRAQ6ISU1 281 aaPredicted RBP13.2□□□□□ -0.3
SMTN-215ENST00000472911 CLEC17AQ6ZS10 378 aa13.2□□□□□ -0.3
SMTN-215ENST00000472911 SLC39A11Q8N1S5 342 aa13.2□□□□□ -0.3
SMTN-215ENST00000472911 RPS6KC1Q96S38 1066 aa13.2□□□□□ -0.3
SMTN-215ENST00000472911 CCDC94Q9BW85 323 aaPredicted RBP13.2□□□□□ -0.3
SMTN-215ENST00000472911 ALG13Q9NP73 1137 aaKnown RBP13.2□□□□□ -0.3
SMTN-215ENST00000472911 STYXL1Q9Y6J8 313 aa13.2□□□□□ -0.3
SMTN-215ENST00000472911 GRXCR2A6NFK2 248 aa13.19□□□□□ -0.3
SMTN-215ENST00000472911 NT5C1B-RDH14C9J2C7 533 aa13.19□□□□□ -0.3
SMTN-215ENST00000472911 EIF3DO15371 548 aaKnown RBP eCLIP13.19□□□□□ -0.3
SMTN-215ENST00000472911 FGF18O76093 207 aa13.19□□□□□ -0.3
SMTN-215ENST00000472911 RPN1P04843 607 aaKnown RBP13.19□□□□□ -0.3
SMTN-215ENST00000472911 GALTP07902 379 aa13.19□□□□□ -0.3
SMTN-215ENST00000472911 DNAJB1P25685 340 aa13.19□□□□□ -0.3
SMTN-215ENST00000472911 ADSSP30520 456 aa13.19□□□□□ -0.3
SMTN-215ENST00000472911 TNFSF9P41273 254 aa13.19□□□□□ -0.3
SMTN-215ENST00000472911 SLC11A1P49279 550 aa13.19□□□□□ -0.3
SMTN-215ENST00000472911 GRIK3Q13003 919 aa13.19□□□□□ -0.3
SMTN-215ENST00000472911 NAB2Q15742 525 aa13.19□□□□□ -0.3
SMTN-215ENST00000472911 ALKAL1Q6UXT8 129 aa13.19□□□□□ -0.3
SMTN-215ENST00000472911 HFE2Q6ZVN8 426 aa13.19□□□□□ -0.3
SMTN-215ENST00000472911 TMEM173Q86WV6 379 aaPredicted RBP13.19□□□□□ -0.3
SMTN-215ENST00000472911 COLGALT2Q8IYK4 626 aa13.19□□□□□ -0.3
SMTN-215ENST00000472911 ZNF507Q8TCN5 953 aa13.19□□□□□ -0.3
SMTN-215ENST00000472911 SPPL3Q8TCT6 385 aa13.19□□□□□ -0.3
SMTN-215ENST00000472911 BCL7CQ8WUZ0 217 aaPredicted RBP13.19□□□□□ -0.3
SMTN-215ENST00000472911 SCFD1Q8WVM8 642 aa13.19□□□□□ -0.3
SMTN-215ENST00000472911 ACAP3Q96P50 834 aa13.19□□□□□ -0.3
SMTN-215ENST00000472911 GBP4Q96PP9 640 aa13.19□□□□□ -0.3
SMTN-215ENST00000472911 FAM193BQ96PV7 902 aaPredicted RBP13.19□□□□□ -0.3
SMTN-215ENST00000472911 MSTO1Q9BUK6 570 aa13.19□□□□□ -0.3
SMTN-215ENST00000472911 SLC39A2Q9NP94 309 aa13.19□□□□□ -0.3
SMTN-215ENST00000472911 EXOC1Q9NV70 894 aa13.19□□□□□ -0.3
SMTN-215ENST00000472911 EXOC7Q9UPT5 735 aa13.19□□□□□ -0.3
SMTN-215ENST00000472911 TECTAO75443 2155 aa13.19□□□□□ -0.3
SMTN-215ENST00000472911 CACNA1HO95180 2353 aa13.18□□□□□ -0.3
SMTN-215ENST00000472911 VWA8A3KMH1 1905 aa13.18□□□□□ -0.3
SMTN-215ENST00000472911 OGTO15294 1046 aa13.18□□□□□ -0.3
SMTN-215ENST00000472911 CXCL8P10145 99 aa13.18□□□□□ -0.3
SMTN-215ENST00000472911 ALDH7A1P49419 539 aaKnown RBP13.18□□□□□ -0.3
SMTN-215ENST00000472911 YARSP54577 528 aaKnown RBP13.18□□□□□ -0.3
SMTN-215ENST00000472911 STK4Q13043 487 aa13.18□□□□□ -0.3
SMTN-215ENST00000472911 PNOCQ13519 176 aa13.18□□□□□ -0.3
SMTN-215ENST00000472911 CAMK1Q14012 370 aa13.18□□□□□ -0.3
SMTN-215ENST00000472911 POSTNQ15063 836 aa13.18□□□□□ -0.3
SMTN-215ENST00000472911 SLC10A6Q3KNW5 377 aa13.18□□□□□ -0.3
SMTN-215ENST00000472911 XKR4Q5GH76 650 aa13.18□□□□□ -0.3
SMTN-215ENST00000472911 GLRA4Q5JXX5 417 aa13.18□□□□□ -0.3
SMTN-215ENST00000472911 KANK3Q6NY19 840 aa13.18□□□□□ -0.3
SMTN-215ENST00000472911 STXBP4Q6ZWJ1 553 aa13.18□□□□□ -0.3
SMTN-215ENST00000472911 SYCP3Q8IZU3 236 aa13.18□□□□□ -0.3
SMTN-215ENST00000472911 KIAA0895Q8NCT3 520 aa13.18□□□□□ -0.3
SMTN-215ENST00000472911 MRPL38Q96DV4 380 aaKnown RBP13.18□□□□□ -0.3
SMTN-215ENST00000472911 TIGD1Q96MW7 591 aa13.18□□□□□ -0.3
SMTN-215ENST00000472911 PPP1R10Q96QC0 940 aaKnown RBP13.18□□□□□ -0.3
SMTN-215ENST00000472911 TMEM175Q9BSA9 504 aa13.18□□□□□ -0.3
SMTN-215ENST00000472911 TMEM206Q9H813 350 aa13.18□□□□□ -0.3
SMTN-215ENST00000472911 TOPORSQ9NS56 1045 aaPredicted RBP13.18□□□□□ -0.3
SMTN-215ENST00000472911 SPG21Q9NZD8 308 aa13.18□□□□□ -0.3
SMTN-215ENST00000472911 CACNG4Q9UBN1 327 aa13.18□□□□□ -0.3
SMTN-215ENST00000472911 C5orf42Q9H799 3197 aa13.18□□□□□ -0.3
SMTN-215ENST00000472911 UBE4BO95155 1302 aa13.17□□□□□ -0.3
SMTN-215ENST00000472911 PTPRZ1P23471 2315 aaPredicted RBP13.17□□□□□ -0.3
SMTN-215ENST00000472911 SMIM28A0A1B0GU29 152 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms