RNA–Protein interactions for RNA: ENST00000471861.5

CCDC78-208, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 743 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-208ENST00000471861 MAGEA9P43362 315 aa21.95■■□□□ 1.1
CCDC78-208ENST00000471861 NCBP1Q09161 790 aaKnown RBP21.95■■□□□ 1.1
CCDC78-208ENST00000471861 TUSC3Q13454 348 aa21.95■■□□□ 1.1
CCDC78-208ENST00000471861 NAB2Q15742 525 aa21.95■■□□□ 1.1
CCDC78-208ENST00000471861 TPRG1Q6ZUI0 275 aa21.95■■□□□ 1.1
CCDC78-208ENST00000471861 CEP57Q86XR8 500 aa21.95■■□□□ 1.1
CCDC78-208ENST00000471861 ATRIPQ8WXE1 791 aa21.95■■□□□ 1.1
CCDC78-208ENST00000471861 ING5Q8WYH8 240 aa21.95■■□□□ 1.1
CCDC78-208ENST00000471861 BORCS6Q96GS4 357 aa21.95■■□□□ 1.1
CCDC78-208ENST00000471861 PARD6AQ9NPB6 346 aa21.95■■□□□ 1.1
CCDC78-208ENST00000471861 DNMT3BQ9UBC3 853 aaKnown RBP21.95■■□□□ 1.1
CCDC78-208ENST00000471861 CCNT1O60563 726 aaKnown RBP21.94■■□□□ 1.1
CCDC78-208ENST00000471861 IGFBP6P24592 240 aaPredicted RBP21.94■■□□□ 1.1
CCDC78-208ENST00000471861 PFKPQ01813 784 aa21.94■■□□□ 1.1
CCDC78-208ENST00000471861 EARS2Q5JPH6 523 aaKnown RBP21.94■■□□□ 1.1
CCDC78-208ENST00000471861 FAM177A1Q8N128 213 aaPredicted RBP21.94■■□□□ 1.1
CCDC78-208ENST00000471861 OXER1Q8TDS5 423 aa21.94■■□□□ 1.1
CCDC78-208ENST00000471861 LARP6Q9BRS8 491 aaKnown RBP21.94■■□□□ 1.1
CCDC78-208ENST00000471861 PLA2G2FQ9BZM2 168 aa21.94■■□□□ 1.1
CCDC78-208ENST00000471861 GJB4Q9NTQ9 266 aa21.94■■□□□ 1.1
CCDC78-208ENST00000471861 CCDC194A0A1B0GVG4 234 aa21.93■■□□□ 1.1
CCDC78-208ENST00000471861 TTLL13PA6NNM8 815 aa21.93■■□□□ 1.1
CCDC78-208ENST00000471861 XYLBO75191 536 aa21.93■■□□□ 1.1
CCDC78-208ENST00000471861 LMNB2Q03252 620 aa21.93■■□□□ 1.1
CCDC78-208ENST00000471861 SLC5A9Q2M3M2 681 aa21.93■■□□□ 1.1
CCDC78-208ENST00000471861 ZBTB41Q5SVQ8 909 aa21.93■■□□□ 1.1
CCDC78-208ENST00000471861 TPH2Q8IWU9 490 aa21.93■■□□□ 1.1
CCDC78-208ENST00000471861 GPR161Q8N6U8 529 aaKnown RBP21.93■■□□□ 1.1
CCDC78-208ENST00000471861 DCDC2BA2VCK2 349 aa21.92■■□□□ 1.1
CCDC78-208ENST00000471861 FAM205CA6NFA0 338 aa21.92■■□□□ 1.1
CCDC78-208ENST00000471861 CPLX1O14810 134 aa21.92■■□□□ 1.1
CCDC78-208ENST00000471861 DGAT1O75907 488 aa21.92■■□□□ 1.1
CCDC78-208ENST00000471861 LYPLA2O95372 231 aa21.92■■□□□ 1.1
CCDC78-208ENST00000471861 TDGF1P13385 188 aa21.92■■□□□ 1.1
CCDC78-208ENST00000471861 RPS9P46781 194 aaKnown RBP21.92■■□□□ 1.1
CCDC78-208ENST00000471861 RAB33AQ14088 237 aa21.92■■□□□ 1.1
CCDC78-208ENST00000471861 PABPC1LQ4VXU2 614 aaKnown RBP21.92■■□□□ 1.1
CCDC78-208ENST00000471861 AXDND1Q5T1B0 1012 aaPredicted RBP21.92■■□□□ 1.1
CCDC78-208ENST00000471861 PIK3AP1Q6ZUJ8 805 aa21.92■■□□□ 1.1
CCDC78-208ENST00000471861 ZNF687Q8N1G0 1237 aa21.92■■□□□ 1.1
CCDC78-208ENST00000471861 EIF2AK1Q9BQI3 630 aaKnown RBP21.92■■□□□ 1.1
CCDC78-208ENST00000471861 POLR3FQ9H1D9 316 aaPredicted RBP21.92■■□□□ 1.1
CCDC78-208ENST00000471861 HEBP1Q9NRV9 189 aa21.92■■□□□ 1.1
CCDC78-208ENST00000471861 CDV3Q9UKY7 258 aaKnown RBP21.92■■□□□ 1.1
CCDC78-208ENST00000471861 KCNH3Q9ULD8 1083 aa21.92■■□□□ 1.1
CCDC78-208ENST00000471861 COL4A2P08572 1712 aa21.92■■□□□ 1.1
CCDC78-208ENST00000471861 PRR5-ARHGAP8B1AHC4 643 aa21.91■■□□□ 1.1
CCDC78-208ENST00000471861 DTNBO60941 627 aa21.91■■□□□ 1.1
CCDC78-208ENST00000471861 SDHBP21912 280 aa21.91■■□□□ 1.1
CCDC78-208ENST00000471861 PSMA5P28066 241 aa21.91■■□□□ 1.1
CCDC78-208ENST00000471861 OR1D2P34982 312 aa21.91■■□□□ 1.1
CCDC78-208ENST00000471861 RARRES1P49788 294 aa21.91■■□□□ 1.1
CCDC78-208ENST00000471861 ARHGAP8P85298 464 aa21.91■■□□□ 1.1
CCDC78-208ENST00000471861 MTAPQ13126 283 aa21.91■■□□□ 1.1
CCDC78-208ENST00000471861 PPP4R3CPQ6ZMV5 832 aa21.91■■□□□ 1.1
CCDC78-208ENST00000471861 RUFY3Q7L099 469 aa21.91■■□□□ 1.1
CCDC78-208ENST00000471861 HSD17B14Q9BPX1 270 aa21.91■■□□□ 1.1
CCDC78-208ENST00000471861 GPRC5CQ9NQ84 441 aa21.91■■□□□ 1.1
CCDC78-208ENST00000471861 SNTG2Q9NY99 539 aa21.91■■□□□ 1.1
CCDC78-208ENST00000471861 USP18Q9UMW8 372 aa21.91■■□□□ 1.1
CCDC78-208ENST00000471861 ECI2O75521 394 aa21.9■■□□□ 1.1
CCDC78-208ENST00000471861 RECQL4O94761 1208 aa21.9■■□□□ 1.1
CCDC78-208ENST00000471861 STK3Q13188 491 aa21.9■■□□□ 1.1
CCDC78-208ENST00000471861 ZNF274Q96GC6 653 aaPredicted RBP21.9■■□□□ 1.1
CCDC78-208ENST00000471861 PDZD7Q9H5P4 517 aa21.9■■□□□ 1.1
CCDC78-208ENST00000471861 ANKEF1Q9NU02 776 aa21.9■■□□□ 1.1
CCDC78-208ENST00000471861 MTRRQ9UBK8 725 aa21.9■■□□□ 1.1
CCDC78-208ENST00000471861 MAP1BP46821 2468 aaKnown RBP21.89■■□□□ 1.1
CCDC78-208ENST00000471861 NRG2O14511 850 aaPredicted RBP21.89■■□□□ 1.09
CCDC78-208ENST00000471861 EDN1P05305 212 aa21.89■■□□□ 1.09
CCDC78-208ENST00000471861 FGFR3P22607 806 aa21.89■■□□□ 1.09
CCDC78-208ENST00000471861 FCARP24071 287 aa21.89■■□□□ 1.09
CCDC78-208ENST00000471861 UVSSAQ2YD98 709 aa21.89■■□□□ 1.09
CCDC78-208ENST00000471861 CDCA2Q69YH5 1023 aaPredicted RBP21.89■■□□□ 1.09
CCDC78-208ENST00000471861 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.89■■□□□ 1.09
CCDC78-208ENST00000471861 SECISBP2LQ93073 1101 aaKnown RBP21.89■■□□□ 1.09
CCDC78-208ENST00000471861 MCRS1Q96EZ8 462 aa21.89■■□□□ 1.09
CCDC78-208ENST00000471861 RTKNQ9BST9 563 aa21.89■■□□□ 1.09
CCDC78-208ENST00000471861 ZSWIM6Q9HCJ5 1215 aa21.89■■□□□ 1.09
CCDC78-208ENST00000471861 A0A087WWV3 80 aa21.88■■□□□ 1.09
CCDC78-208ENST00000471861 LRRIQ4A6NIV6 560 aa21.88■■□□□ 1.09
CCDC78-208ENST00000471861 MARCH6O60337 910 aa21.88■■□□□ 1.09
CCDC78-208ENST00000471861 TBC1D4O60343 1298 aa21.88■■□□□ 1.09
CCDC78-208ENST00000471861 USO1O60763 962 aaKnown RBP21.88■■□□□ 1.09
CCDC78-208ENST00000471861 THP07101 528 aa21.88■■□□□ 1.09
CCDC78-208ENST00000471861 RHOP08100 348 aa21.88■■□□□ 1.09
CCDC78-208ENST00000471861 CEBPBP17676 345 aa21.88■■□□□ 1.09
CCDC78-208ENST00000471861 ADCY1Q08828 1119 aa21.88■■□□□ 1.09
CCDC78-208ENST00000471861 TANGO2Q6ICL3 276 aa21.88■■□□□ 1.09
CCDC78-208ENST00000471861 CD300LGQ6UXG3 332 aa21.88■■□□□ 1.09
CCDC78-208ENST00000471861 ZNF852Q6ZMS4 543 aa21.88■■□□□ 1.09
CCDC78-208ENST00000471861 SLFN12Q8IYM2 578 aa21.88■■□□□ 1.09
CCDC78-208ENST00000471861 PIGOQ8TEQ8 1089 aa21.88■■□□□ 1.09
CCDC78-208ENST00000471861 PRIMPOLQ96LW4 560 aa21.88■■□□□ 1.09
CCDC78-208ENST00000471861 NELL2Q99435 816 aa21.88■■□□□ 1.09
CCDC78-208ENST00000471861 FZD8Q9H461 694 aa21.88■■□□□ 1.09
CCDC78-208ENST00000471861 USP20Q9Y2K6 914 aa21.88■■□□□ 1.09
CCDC78-208ENST00000471861 MRPS23Q9Y3D9 190 aaKnown RBP21.88■■□□□ 1.09
CCDC78-208ENST00000471861 CDY1Q9Y6F8 540 aa21.88■■□□□ 1.09
CCDC78-208ENST00000471861 CFAP47Q6ZTR5 3102 aa21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms