RNA–Protein interactions for RNA: ENST00000471701.1

PRPF40A-207, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 293 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-207ENST00000471701 CLRN3Q8NCR9 226 aa4.83□□□□□ -1.64
PRPF40A-207ENST00000471701 OR7D4Q8NG98 312 aa4.83□□□□□ -1.64
PRPF40A-207ENST00000471701 CAGE1Q8TC20 777 aa4.83□□□□□ -1.64
PRPF40A-207ENST00000471701 LINC00476Q8WZB0 136 aa4.83□□□□□ -1.64
PRPF40A-207ENST00000471701 SLC9A6Q92581 669 aa4.83□□□□□ -1.64
PRPF40A-207ENST00000471701 NELL1Q92832 810 aa4.83□□□□□ -1.64
PRPF40A-207ENST00000471701 RSAD1Q9HA92 442 aa4.83□□□□□ -1.64
PRPF40A-207ENST00000471701 MOCS1Q9NZB8 636 aa4.83□□□□□ -1.64
PRPF40A-207ENST00000471701 APOBEC2Q9Y235 224 aaKnown RBP4.83□□□□□ -1.64
PRPF40A-207ENST00000471701 ENPP3O14638 875 aa4.82□□□□□ -1.64
PRPF40A-207ENST00000471701 ADCY6O43306 1168 aa4.82□□□□□ -1.64
PRPF40A-207ENST00000471701 CDKL5O76039 1030 aa4.82□□□□□ -1.64
PRPF40A-207ENST00000471701 SPDEFO95238 335 aa4.82□□□□□ -1.64
PRPF40A-207ENST00000471701 ESRRBO95718 433 aa4.82□□□□□ -1.64
PRPF40A-207ENST00000471701 CFIP05156 583 aa4.82□□□□□ -1.64
PRPF40A-207ENST00000471701 EGR2P11161 476 aaPredicted RBP4.82□□□□□ -1.64
PRPF40A-207ENST00000471701 FBLP22087 321 aaKnown RBP4.82□□□□□ -1.64
PRPF40A-207ENST00000471701 FOXI1Q12951 378 aa4.82□□□□□ -1.64
PRPF40A-207ENST00000471701 SP140Q13342 867 aa4.82□□□□□ -1.64
PRPF40A-207ENST00000471701 MPP3Q13368 585 aa4.82□□□□□ -1.64
PRPF40A-207ENST00000471701 MST1LQ2TV78 715 aa4.82□□□□□ -1.64
PRPF40A-207ENST00000471701 AGAP9Q5VTM2 703 aa4.82□□□□□ -1.64
PRPF40A-207ENST00000471701 RD3Q7Z3Z2 195 aa4.82□□□□□ -1.64
PRPF40A-207ENST00000471701 NOP9Q86U38 636 aaKnown RBP4.82□□□□□ -1.64
PRPF40A-207ENST00000471701 MAPKAPK5Q8IW41 473 aa4.82□□□□□ -1.64
PRPF40A-207ENST00000471701 RHOT2Q8IXI1 618 aa4.82□□□□□ -1.64
PRPF40A-207ENST00000471701 PQLC1Q8N2U9 271 aa4.82□□□□□ -1.64
PRPF40A-207ENST00000471701 TMEM132CQ8N3T6 1108 aa4.82□□□□□ -1.64
PRPF40A-207ENST00000471701 UBR7Q8N806 425 aa4.82□□□□□ -1.64
PRPF40A-207ENST00000471701 OR56A1Q8NGH5 318 aa4.82□□□□□ -1.64
PRPF40A-207ENST00000471701 ZNF764Q96H86 408 aaPredicted RBP4.82□□□□□ -1.64
PRPF40A-207ENST00000471701 ADAM2Q99965 735 aa4.82□□□□□ -1.64
PRPF40A-207ENST00000471701 MRI1Q9BV20 369 aa4.82□□□□□ -1.64
PRPF40A-207ENST00000471701 SENP6Q9GZR1 1112 aaPredicted RBP4.82□□□□□ -1.64
PRPF40A-207ENST00000471701 GREM2Q9H772 168 aa4.82□□□□□ -1.64
PRPF40A-207ENST00000471701 IFT122Q9HBG6 1241 aa4.82□□□□□ -1.64
PRPF40A-207ENST00000471701 ADARB2Q9NS39 739 aaKnown RBP4.82□□□□□ -1.64
PRPF40A-207ENST00000471701 BRINP1O60477 761 aa4.81□□□□□ -1.64
PRPF40A-207ENST00000471701 RAP2AP10114 183 aa4.81□□□□□ -1.64
PRPF40A-207ENST00000471701 LMO1P25800 156 aa4.81□□□□□ -1.64
PRPF40A-207ENST00000471701 SOX5P35711 763 aa4.81□□□□□ -1.64
PRPF40A-207ENST00000471701 ELLP55199 621 aaPredicted RBP4.81□□□□□ -1.64
PRPF40A-207ENST00000471701 SCAND1P57086 179 aa4.81□□□□□ -1.64
PRPF40A-207ENST00000471701 UBXN2BQ14CS0 331 aa4.81□□□□□ -1.64
PRPF40A-207ENST00000471701 PRR16Q569H4 304 aa4.81□□□□□ -1.64
PRPF40A-207ENST00000471701 FBXO42Q6P3S6 717 aa4.81□□□□□ -1.64
PRPF40A-207ENST00000471701 FOXR2Q6PJQ5 311 aa4.81□□□□□ -1.64
PRPF40A-207ENST00000471701 DRC7Q8IY82 874 aa4.81□□□□□ -1.64
PRPF40A-207ENST00000471701 TRMT2AQ8IZ69 625 aaKnown RBP4.81□□□□□ -1.64
PRPF40A-207ENST00000471701 FAM43AQ8N2R8 423 aa4.81□□□□□ -1.64
PRPF40A-207ENST00000471701 TGFBRAP1Q8WUH2 860 aa4.81□□□□□ -1.64
PRPF40A-207ENST00000471701 STON2Q8WXE9 905 aa4.81□□□□□ -1.64
PRPF40A-207ENST00000471701 ASB10Q8WXI3 467 aa4.81□□□□□ -1.64
PRPF40A-207ENST00000471701 BBC3Q96PG8 261 aaPredicted RBP4.81□□□□□ -1.64
PRPF40A-207ENST00000471701 ADI1Q9BV57 179 aa4.81□□□□□ -1.64
PRPF40A-207ENST00000471701 ACE2Q9BYF1 805 aaPredicted RBP4.81□□□□□ -1.64
PRPF40A-207ENST00000471701 ALOXE3Q9BYJ1 711 aa4.81□□□□□ -1.64
PRPF40A-207ENST00000471701 QRSL1Q9H0R6 528 aaKnown RBP4.81□□□□□ -1.64
PRPF40A-207ENST00000471701 CAAP1Q9H8G2 361 aa4.81□□□□□ -1.64
PRPF40A-207ENST00000471701 RBM12Q9NTZ6 932 aaKnown RBP4.81□□□□□ -1.64
PRPF40A-207ENST00000471701 KLHL11Q9NVR0 708 aa4.81□□□□□ -1.64
PRPF40A-207ENST00000471701 TNFRSF18Q9Y5U5 241 aa4.81□□□□□ -1.64
PRPF40A-207ENST00000471701 COX11Q9Y6N1 276 aa4.81□□□□□ -1.64
PRPF40A-207ENST00000471701 SPATA31A6Q5VVP1 1343 aa4.8□□□□□ -1.64
PRPF40A-207ENST00000471701 PNPLA7Q6ZV29 1317 aa4.8□□□□□ -1.64
PRPF40A-207ENST00000471701 GSPT1P15170 499 aaKnown RBP4.8□□□□□ -1.64
PRPF40A-207ENST00000471701 ALOX15P16050 662 aaPredicted RBP4.8□□□□□ -1.64
PRPF40A-207ENST00000471701 CPEP16870 476 aa4.8□□□□□ -1.64
PRPF40A-207ENST00000471701 ATP5JP18859 108 aa4.8□□□□□ -1.64
PRPF40A-207ENST00000471701 PLA2G5P39877 138 aa4.8□□□□□ -1.64
PRPF40A-207ENST00000471701 MPLP40238 635 aa4.8□□□□□ -1.64
PRPF40A-207ENST00000471701 CLK3P49761 638 aaKnown RBP4.8□□□□□ -1.64
PRPF40A-207ENST00000471701 NOMO1Q15155 1222 aa4.8□□□□□ -1.64
PRPF40A-207ENST00000471701 ADRM1Q16186 407 aa4.8□□□□□ -1.64
PRPF40A-207ENST00000471701 ANO4Q32M45 955 aa4.8□□□□□ -1.64
PRPF40A-207ENST00000471701 CT47A1Q5JQC4 288 aaPredicted RBP4.8□□□□□ -1.64
PRPF40A-207ENST00000471701 AFMIDQ63HM1 303 aa4.8□□□□□ -1.64
PRPF40A-207ENST00000471701 Q6ZVL8 140 aa4.8□□□□□ -1.64
PRPF40A-207ENST00000471701 RNF180Q86T96 592 aa4.8□□□□□ -1.64
PRPF40A-207ENST00000471701 SLC44A3Q8N4M1 653 aa4.8□□□□□ -1.64
PRPF40A-207ENST00000471701 FBXO18Q8NFZ0 1043 aa4.8□□□□□ -1.64
PRPF40A-207ENST00000471701 LMBR1Q8WVP7 490 aa4.8□□□□□ -1.64
PRPF40A-207ENST00000471701 FUBP3Q96I24 572 aaKnown RBP eCLIP4.8□□□□□ -1.64
PRPF40A-207ENST00000471701 NEU1Q99519 415 aa4.8□□□□□ -1.64
PRPF40A-207ENST00000471701 RNPEPQ9H4A4 650 aa4.8□□□□□ -1.64
PRPF40A-207ENST00000471701 TMEM140Q9NV12 185 aa4.8□□□□□ -1.64
PRPF40A-207ENST00000471701 TBCCD1Q9NVR7 557 aa4.8□□□□□ -1.64
PRPF40A-207ENST00000471701 A0A1B0GTW7 788 aa4.79□□□□□ -1.64
PRPF40A-207ENST00000471701 FDXRP22570 491 aa4.79□□□□□ -1.64
PRPF40A-207ENST00000471701 SREBF1P36956 1147 aa4.79□□□□□ -1.64
PRPF40A-207ENST00000471701 C21orf58P58505 322 aa4.79□□□□□ -1.64
PRPF40A-207ENST00000471701 MUM1Q2TAK8 710 aa4.79□□□□□ -1.64
PRPF40A-207ENST00000471701 TOR2AQ5JU69 321 aa4.79□□□□□ -1.64
PRPF40A-207ENST00000471701 STRA8Q7Z7C7 330 aa4.79□□□□□ -1.64
PRPF40A-207ENST00000471701 GPR149Q86SP6 731 aa4.79□□□□□ -1.64
PRPF40A-207ENST00000471701 THNSL2Q86YJ6 484 aa4.79□□□□□ -1.64
PRPF40A-207ENST00000471701 CMIPQ8IY22 773 aa4.79□□□□□ -1.64
PRPF40A-207ENST00000471701 SIMC1Q8NDZ2 872 aa4.79□□□□□ -1.64
PRPF40A-207ENST00000471701 RNF31Q96EP0 1072 aa4.79□□□□□ -1.64
PRPF40A-207ENST00000471701 BOD1Q96IK1 185 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms