RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 MMRN2Q9H8L6 949 aa20.85■□□□□ 0.93
PSPC1-203ENST00000471658 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.85■□□□□ 0.93
PSPC1-203ENST00000471658 PTPRJQ12913 1337 aa20.85■□□□□ 0.93
PSPC1-203ENST00000471658 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.84■□□□□ 0.93
PSPC1-203ENST00000471658 ZNF623O75123 536 aa20.84■□□□□ 0.93
PSPC1-203ENST00000471658 FAM189BP81408 668 aa20.84■□□□□ 0.93
PSPC1-203ENST00000471658 MAN2A1Q16706 1144 aa20.84■□□□□ 0.93
PSPC1-203ENST00000471658 KYAT1Q16773 422 aa20.84■□□□□ 0.93
PSPC1-203ENST00000471658 CNKSR3Q6P9H4 555 aa20.84■□□□□ 0.93
PSPC1-203ENST00000471658 AGMOQ6ZNB7 445 aa20.84■□□□□ 0.93
PSPC1-203ENST00000471658 SLC24A5Q71RS6 500 aa20.84■□□□□ 0.93
PSPC1-203ENST00000471658 C16orf59Q7L2K0 433 aa20.84■□□□□ 0.93
PSPC1-203ENST00000471658 TMEM130Q8N3G9 435 aa20.84■□□□□ 0.93
PSPC1-203ENST00000471658 ANKRD20A12PQ8NF67 263 aa20.84■□□□□ 0.93
PSPC1-203ENST00000471658 TMC2Q8TDI7 906 aa20.84■□□□□ 0.93
PSPC1-203ENST00000471658 ZNF516Q92618 1163 aa20.84■□□□□ 0.93
PSPC1-203ENST00000471658 TTC26A0AVF1 554 aa20.83■□□□□ 0.93
PSPC1-203ENST00000471658 PES1O00541 588 aaKnown RBP20.83■□□□□ 0.93
PSPC1-203ENST00000471658 TEX33O43247 280 aa20.83■□□□□ 0.93
PSPC1-203ENST00000471658 ITGA4P13612 1032 aa20.83■□□□□ 0.93
PSPC1-203ENST00000471658 UBASH3AP57075 661 aa20.83■□□□□ 0.93
PSPC1-203ENST00000471658 PPP3CAQ08209 521 aa20.83■□□□□ 0.93
PSPC1-203ENST00000471658 KCNH2Q12809 1159 aa20.83■□□□□ 0.93
PSPC1-203ENST00000471658 VWA3BQ502W6 1294 aa20.83■□□□□ 0.93
PSPC1-203ENST00000471658 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.83■□□□□ 0.93
PSPC1-203ENST00000471658 ZNF598Q86UK7 904 aaKnown RBP20.83■□□□□ 0.93
PSPC1-203ENST00000471658 XPO4Q9C0E2 1151 aaKnown RBP20.83■□□□□ 0.93
PSPC1-203ENST00000471658 INTS13Q9NVM9 706 aa20.83■□□□□ 0.93
PSPC1-203ENST00000471658 RAB27AP51159 221 aa20.82■□□□□ 0.92
PSPC1-203ENST00000471658 AFF1P51825 1210 aaKnown RBP20.82■□□□□ 0.92
PSPC1-203ENST00000471658 EPHB4P54760 987 aa20.82■□□□□ 0.92
PSPC1-203ENST00000471658 MCCD1P59942 119 aaPredicted RBP20.82■□□□□ 0.92
PSPC1-203ENST00000471658 ALKAL1Q6UXT8 129 aa20.82■□□□□ 0.92
PSPC1-203ENST00000471658 EFCAB13Q8IY85 973 aa20.82■□□□□ 0.92
PSPC1-203ENST00000471658 SNX27Q96L92 541 aa20.82■□□□□ 0.92
PSPC1-203ENST00000471658 NDST4Q9H3R1 872 aa20.82■□□□□ 0.92
PSPC1-203ENST00000471658 IL23AQ9NPF7 189 aa20.82■□□□□ 0.92
PSPC1-203ENST00000471658 A0A1B0GTH6 734 aa20.82■□□□□ 0.92
PSPC1-203ENST00000471658 GCLMP48507 274 aa20.82■□□□□ 0.92
PSPC1-203ENST00000471658 MRE11P49959 708 aa20.82■□□□□ 0.92
PSPC1-203ENST00000471658 YARSP54577 528 aaKnown RBP20.82■□□□□ 0.92
PSPC1-203ENST00000471658 IKBKEQ14164 716 aa20.82■□□□□ 0.92
PSPC1-203ENST00000471658 SCARA3Q6AZY7 606 aa20.82■□□□□ 0.92
PSPC1-203ENST00000471658 JADE1Q6IE81 842 aa20.82■□□□□ 0.92
PSPC1-203ENST00000471658 SARM1Q6SZW1 724 aa20.82■□□□□ 0.92
PSPC1-203ENST00000471658 RPUSD2Q8IZ73 545 aaKnown RBP20.82■□□□□ 0.92
PSPC1-203ENST00000471658 OR5B17Q8NGF7 314 aa20.82■□□□□ 0.92
PSPC1-203ENST00000471658 ZMAT2Q96NC0 199 aaKnown RBP20.82■□□□□ 0.92
PSPC1-203ENST00000471658 FNBP1Q96RU3 617 aa20.82■□□□□ 0.92
PSPC1-203ENST00000471658 RTN4Q9NQC3 1192 aaKnown RBP20.82■□□□□ 0.92
PSPC1-203ENST00000471658 C1orf112Q9NSG2 853 aa20.82■□□□□ 0.92
PSPC1-203ENST00000471658 AFPP02771 609 aaKnown RBP20.81■□□□□ 0.92
PSPC1-203ENST00000471658 NFICP08651 508 aa20.81■□□□□ 0.92
PSPC1-203ENST00000471658 TNNI1P19237 187 aa20.81■□□□□ 0.92
PSPC1-203ENST00000471658 HSP90AA2PQ14568 343 aaPredicted RBP20.81■□□□□ 0.92
PSPC1-203ENST00000471658 NR1I3Q14994 352 aa20.81■□□□□ 0.92
PSPC1-203ENST00000471658 CBWD6Q4V339 395 aa20.81■□□□□ 0.92
PSPC1-203ENST00000471658 CBWD3Q5JTY5 395 aa20.81■□□□□ 0.92
PSPC1-203ENST00000471658 GLRA4Q5JXX5 417 aa20.81■□□□□ 0.92
PSPC1-203ENST00000471658 CBWD5Q5RIA9 395 aa20.81■□□□□ 0.92
PSPC1-203ENST00000471658 ZFP42Q96MM3 310 aa20.81■□□□□ 0.92
PSPC1-203ENST00000471658 GAD1Q99259 594 aa20.81■□□□□ 0.92
PSPC1-203ENST00000471658 CGRRF1Q99675 332 aa20.81■□□□□ 0.92
PSPC1-203ENST00000471658 TRIM5Q9C035 493 aa20.81■□□□□ 0.92
PSPC1-203ENST00000471658 MIOSQ9NXC5 875 aa20.81■□□□□ 0.92
PSPC1-203ENST00000471658 LGALS16A8MUM7 142 aa20.8■□□□□ 0.92
PSPC1-203ENST00000471658 IL18RAPO95256 599 aa20.8■□□□□ 0.92
PSPC1-203ENST00000471658 SKIP12755 728 aa20.8■□□□□ 0.92
PSPC1-203ENST00000471658 CLDN10P78369 228 aa20.8■□□□□ 0.92
PSPC1-203ENST00000471658 POU5F1Q01860 360 aaKnown RBP20.8■□□□□ 0.92
PSPC1-203ENST00000471658 FPGSQ05932 587 aa20.8■□□□□ 0.92
PSPC1-203ENST00000471658 PPP2R3AQ06190 1150 aa20.8■□□□□ 0.92
PSPC1-203ENST00000471658 PPIGQ13427 754 aaKnown RBP eCLIP20.8■□□□□ 0.921e-9■■□□□ 14.1
PSPC1-203ENST00000471658 FGFR1P11362 822 aa20.79■□□□□ 0.92
PSPC1-203ENST00000471658 MLH1P40692 756 aa20.79■□□□□ 0.92
PSPC1-203ENST00000471658 ZNF365Q70YC5 407 aa20.79■□□□□ 0.92
PSPC1-203ENST00000471658 OTOP2Q7RTS6 562 aa20.79■□□□□ 0.92
PSPC1-203ENST00000471658 HACE1Q8IYU2 909 aa20.79■□□□□ 0.92
PSPC1-203ENST00000471658 GSTCDQ8NEC7 633 aa20.79■□□□□ 0.92
PSPC1-203ENST00000471658 PGBD4Q96DM1 585 aa20.79■□□□□ 0.92
PSPC1-203ENST00000471658 TMEM117Q9H0C3 514 aa20.79■□□□□ 0.92
PSPC1-203ENST00000471658 ASB7Q9H672 318 aa20.79■□□□□ 0.92
PSPC1-203ENST00000471658 PLEKHA5Q9HAU0 1116 aa20.79■□□□□ 0.92
PSPC1-203ENST00000471658 GIT1Q9Y2X7 761 aa20.79■□□□□ 0.92
PSPC1-203ENST00000471658 SMIM28A0A1B0GU29 152 aa20.78■□□□□ 0.92
PSPC1-203ENST00000471658 PTGESO14684 152 aa20.78■□□□□ 0.92
PSPC1-203ENST00000471658 LRRN2O75325 713 aa20.78■□□□□ 0.92
PSPC1-203ENST00000471658 EOMESO95936 686 aa20.78■□□□□ 0.92
PSPC1-203ENST00000471658 C4BPAP04003 597 aaKnown RBP20.78■□□□□ 0.92
PSPC1-203ENST00000471658 TPM2P07951 284 aa20.78■□□□□ 0.92
PSPC1-203ENST00000471658 FMO5P49326 533 aa20.78■□□□□ 0.92
PSPC1-203ENST00000471658 ZNF75DP51815 510 aa20.78■□□□□ 0.92
PSPC1-203ENST00000471658 GUCY2FP51841 1108 aa20.78■□□□□ 0.92
PSPC1-203ENST00000471658 TFAMQ00059 246 aaKnown RBP20.78■□□□□ 0.92
PSPC1-203ENST00000471658 UBXN1Q04323 297 aa20.78■□□□□ 0.92
PSPC1-203ENST00000471658 SURF1Q15526 300 aa20.78■□□□□ 0.92
PSPC1-203ENST00000471658 FILIP1LQ4L180 1135 aa20.78■□□□□ 0.92
PSPC1-203ENST00000471658 XKR4Q5GH76 650 aa20.78■□□□□ 0.92
PSPC1-203ENST00000471658 SV2AQ7L0J3 742 aa20.78■□□□□ 0.92
PSPC1-203ENST00000471658 KIF12Q96FN5 646 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms