RNA–Protein interactions for RNA: ENST00000471595.5

PCCB-210, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCCB, Length 6,090 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-210ENST00000471595 SEC23AQ15436 765 aa13.72□□□□□ -0.21
PCCB-210ENST00000471595 TTI2Q6NXR4 508 aa13.72□□□□□ -0.21
PCCB-210ENST00000471595 MOXD1Q6UVY6 613 aa13.72□□□□□ -0.21
PCCB-210ENST00000471595 LINC00116Q8NCU8 138 aa13.72□□□□□ -0.21
PCCB-210ENST00000471595 FAM49AQ9H0Q0 323 aaPredicted RBP13.72□□□□□ -0.21
PCCB-210ENST00000471595 ITPRIPL1Q6GPH6 555 aa13.72□□□□□ -0.21
PCCB-210ENST00000471595 RWDD4Q6NW29 188 aaKnown RBP13.72□□□□□ -0.21
PCCB-210ENST00000471595 CARD9Q9H257 536 aa13.72□□□□□ -0.21
PCCB-210ENST00000471595 TSPYL2Q9H2G4 693 aaPredicted RBP13.72□□□□□ -0.21
PCCB-210ENST00000471595 RPAP3Q9H6T3 665 aaPredicted RBP13.72□□□□□ -0.21
PCCB-210ENST00000471595 TMEM8AQ9HCN3 771 aa13.72□□□□□ -0.21
PCCB-210ENST00000471595 SMARCAL1Q9NZC9 954 aa13.72□□□□□ -0.21
PCCB-210ENST00000471595 SPATA31D1Q6ZQQ2 1576 aa13.71□□□□□ -0.21
PCCB-210ENST00000471595 APOL1O14791 398 aa13.71□□□□□ -0.21
PCCB-210ENST00000471595 GNAT1P11488 350 aa13.71□□□□□ -0.21
PCCB-210ENST00000471595 CDH6P55285 790 aa13.71□□□□□ -0.21
PCCB-210ENST00000471595 EIF3EP60228 445 aaKnown RBP13.71□□□□□ -0.21
PCCB-210ENST00000471595 OCRLQ01968 901 aa13.71□□□□□ -0.21
PCCB-210ENST00000471595 PIGHQ14442 188 aaPredicted RBP13.71□□□□□ -0.21
PCCB-210ENST00000471595 CYFIP1Q7L576 1253 aa13.71□□□□□ -0.21
PCCB-210ENST00000471595 SEC16BQ96JE7 1060 aa13.71□□□□□ -0.21
PCCB-210ENST00000471595 WWP1Q9H0M0 922 aa13.71□□□□□ -0.21
PCCB-210ENST00000471595 TMEM131LA2VDJ0 1609 aa13.71□□□□□ -0.21
PCCB-210ENST00000471595 SMAPO00193 183 aa13.71□□□□□ -0.21
PCCB-210ENST00000471595 CENPCQ03188 943 aa13.71□□□□□ -0.21
PCCB-210ENST00000471595 Q3C1V9 767 aa13.71□□□□□ -0.21
PCCB-210ENST00000471595 C4orf50Q6ZRC1 276 aa13.71□□□□□ -0.21
PCCB-210ENST00000471595 RIBC1Q8N443 379 aaPredicted RBP13.71□□□□□ -0.21
PCCB-210ENST00000471595 C3orf20Q8ND61 904 aa13.71□□□□□ -0.21
PCCB-210ENST00000471595 RBM15Q96T37 977 aaKnown RBP eCLIP13.71□□□□□ -0.214e-6■■□□□ 13.6
PCCB-210ENST00000471595 SUDS3Q9H7L9 328 aaPredicted RBP13.71□□□□□ -0.21
PCCB-210ENST00000471595 FAM217BQ9NTX9 383 aaPredicted RBP13.71□□□□□ -0.21
PCCB-210ENST00000471595 SPATA31A1Q5TZJ5 1347 aa13.71□□□□□ -0.21
PCCB-210ENST00000471595 FAM107AO95990 144 aa13.71□□□□□ -0.21
PCCB-210ENST00000471595 KRT10P13645 584 aa13.71□□□□□ -0.21
PCCB-210ENST00000471595 TEDDM1Q5T9Z0 273 aa13.71□□□□□ -0.21
PCCB-210ENST00000471595 NDE1Q9NXR1 346 aa13.71□□□□□ -0.21
PCCB-210ENST00000471595 PCDHB2Q9Y5E7 798 aa13.71□□□□□ -0.21
PCCB-210ENST00000471595 MGEA5O60502 916 aa13.71□□□□□ -0.22
PCCB-210ENST00000471595 PPARGP37231 505 aaPredicted RBP13.71□□□□□ -0.22
PCCB-210ENST00000471595 P3H1Q32P28 736 aa13.71□□□□□ -0.22
PCCB-210ENST00000471595 TKFCQ3LXA3 575 aa13.71□□□□□ -0.22
PCCB-210ENST00000471595 HP1BP3Q5SSJ5 553 aaPredicted RBP13.71□□□□□ -0.22
PCCB-210ENST00000471595 CATSPER3Q86XQ3 398 aa13.71□□□□□ -0.22
PCCB-210ENST00000471595 TPCN2Q8NHX9 752 aa13.71□□□□□ -0.22
PCCB-210ENST00000471595 BFARQ9NZS9 450 aa13.71□□□□□ -0.22
PCCB-210ENST00000471595 ALG6Q9Y672 507 aa13.71□□□□□ -0.22
PCCB-210ENST00000471595 H3BRJ5 948 aa13.7□□□□□ -0.22
PCCB-210ENST00000471595 COMTP21964 271 aa13.7□□□□□ -0.22
PCCB-210ENST00000471595 STILQ15468 1287 aa13.7□□□□□ -0.22
PCCB-210ENST00000471595 PYGBP11216 843 aa13.7□□□□□ -0.22
PCCB-210ENST00000471595 EFHC2Q5JST6 749 aa13.7□□□□□ -0.22
PCCB-210ENST00000471595 NT5DC1Q5TFE4 455 aa13.7□□□□□ -0.22
PCCB-210ENST00000471595 THEM5Q8N1Q8 247 aa13.7□□□□□ -0.22
PCCB-210ENST00000471595 SLC30A5Q8TAD4 765 aa13.7□□□□□ -0.22
PCCB-210ENST00000471595 C18orf8Q96DM3 657 aa13.7□□□□□ -0.22
PCCB-210ENST00000471595 MXRA8Q9BRK3 442 aa13.7□□□□□ -0.22
PCCB-210ENST00000471595 STMN1P16949 149 aa13.7□□□□□ -0.22
PCCB-210ENST00000471595 ST3GAL1Q11201 340 aa13.7□□□□□ -0.22
PCCB-210ENST00000471595 KDM7AQ6ZMT4 941 aa13.7□□□□□ -0.22
PCCB-210ENST00000471595 PRPF31Q8WWY3 499 aaKnown RBP13.7□□□□□ -0.22
PCCB-210ENST00000471595 MROH1Q8NDA8 1641 aa13.7□□□□□ -0.22
PCCB-210ENST00000471595 PFDN1O60925 122 aa13.7□□□□□ -0.22
PCCB-210ENST00000471595 PPFIA2O75334 1257 aa13.7□□□□□ -0.22
PCCB-210ENST00000471595 MUTP22033 750 aa13.7□□□□□ -0.22
PCCB-210ENST00000471595 PTGISQ16647 500 aa13.7□□□□□ -0.22
PCCB-210ENST00000471595 ZC2HC1CQ53FD0 456 aaPredicted RBP13.7□□□□□ -0.22
PCCB-210ENST00000471595 CLEC10AQ8IUN9 316 aa13.7□□□□□ -0.22
PCCB-210ENST00000471595 PIP4K2CQ8TBX8 421 aa13.7□□□□□ -0.22
PCCB-210ENST00000471595 CYFIP2Q96F07 1278 aa13.7□□□□□ -0.22
PCCB-210ENST00000471595 NRBF2Q96F24 287 aa13.7□□□□□ -0.22
PCCB-210ENST00000471595 PSMC3IPQ9P2W1 217 aaPredicted RBP13.7□□□□□ -0.22
PCCB-210ENST00000471595 KITP10721 976 aa13.7□□□□□ -0.22
PCCB-210ENST00000471595 ITPK1Q13572 414 aa13.7□□□□□ -0.22
PCCB-210ENST00000471595 AGGF1Q8N302 714 aaeCLIP13.7□□□□□ -0.22
PCCB-210ENST00000471595 CCDC138Q96M89 665 aa13.7□□□□□ -0.22
PCCB-210ENST00000471595 FAM161BQ96MY7 647 aa13.7□□□□□ -0.22
PCCB-210ENST00000471595 FSD1LQ9BXM9 530 aa13.7□□□□□ -0.22
PCCB-210ENST00000471595 MAGEB5Q9BZ81 275 aa13.7□□□□□ -0.22
PCCB-210ENST00000471595 VCPKMTQ9H867 229 aa13.7□□□□□ -0.22
PCCB-210ENST00000471595 FAM47DPA6NHR8 397 aa13.69□□□□□ -0.22
PCCB-210ENST00000471595 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.69□□□□□ -0.22
PCCB-210ENST00000471595 RASSF3Q86WH2 238 aa13.69□□□□□ -0.22
PCCB-210ENST00000471595 CPA5Q8WXQ8 436 aa13.69□□□□□ -0.22
PCCB-210ENST00000471595 SLC10A4Q96EP9 437 aa13.69□□□□□ -0.22
PCCB-210ENST00000471595 L1RE1Q9UN81 338 aa13.69□□□□□ -0.22
PCCB-210ENST00000471595 CFAP69A5D8W1 941 aa13.69□□□□□ -0.22
PCCB-210ENST00000471595 PRKCBP05771 671 aa13.69□□□□□ -0.22
PCCB-210ENST00000471595 NPEPPSP55786 919 aa13.69□□□□□ -0.22
PCCB-210ENST00000471595 LONRF1Q17RB8 773 aa13.69□□□□□ -0.22
PCCB-210ENST00000471595 SGSM1Q2NKQ1 1148 aa13.69□□□□□ -0.22
PCCB-210ENST00000471595 MYLK4Q86YV6 388 aaPredicted RBP13.69□□□□□ -0.22
PCCB-210ENST00000471595 GIPC2Q8TF65 315 aa13.69□□□□□ -0.22
PCCB-210ENST00000471595 NEU2Q9Y3R4 380 aa13.69□□□□□ -0.22
PCCB-210ENST00000471595 SLC37A4O43826 429 aa13.69□□□□□ -0.22
PCCB-210ENST00000471595 CYP11B2P19099 503 aa13.69□□□□□ -0.22
PCCB-210ENST00000471595 RAD23BP54727 409 aa13.69□□□□□ -0.22
PCCB-210ENST00000471595 RBBP8NLQ8NC74 664 aaPredicted RBP13.69□□□□□ -0.22
PCCB-210ENST00000471595 DHX35Q9H5Z1 703 aaKnown RBP13.69□□□□□ -0.22
PCCB-210ENST00000471595 SUN2Q9UH99 717 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms