RNA–Protein interactions for RNA: ENST00000471414.1

COPS3-206, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-206ENST00000471414 ACE2Q9BYF1 805 aaPredicted RBP4.37□□□□□ -1.71
COPS3-206ENST00000471414 SERHL2Q9H4I8 314 aa4.37□□□□□ -1.71
COPS3-206ENST00000471414 DMRT3Q9NQL9 472 aa4.37□□□□□ -1.71
COPS3-206ENST00000471414 RHOBTB3O94955 611 aa4.36□□□□□ -1.71
COPS3-206ENST00000471414 LMNAP02545 664 aaKnown RBP4.36□□□□□ -1.71
COPS3-206ENST00000471414 CFIP05156 583 aa4.36□□□□□ -1.71
COPS3-206ENST00000471414 SNRPA1P09661 255 aaKnown RBP4.36□□□□□ -1.71
COPS3-206ENST00000471414 ADSLP30566 484 aaPredicted RBP4.36□□□□□ -1.71
COPS3-206ENST00000471414 CHN2P52757 468 aa4.36□□□□□ -1.71
COPS3-206ENST00000471414 NANOS3P60323 173 aaKnown RBP4.36□□□□□ -1.71
COPS3-206ENST00000471414 CCT2P78371 535 aaKnown RBP4.36□□□□□ -1.71
COPS3-206ENST00000471414 ATP8B2P98198 1209 aa4.36□□□□□ -1.71
COPS3-206ENST00000471414 ATXN7L2Q5T6C5 722 aaPredicted RBP4.36□□□□□ -1.71
COPS3-206ENST00000471414 PRIMA1Q86XR5 153 aa4.36□□□□□ -1.71
COPS3-206ENST00000471414 DRC7Q8IY82 874 aa4.36□□□□□ -1.71
COPS3-206ENST00000471414 BEND2Q8NDZ0 799 aa4.36□□□□□ -1.71
COPS3-206ENST00000471414 GPR150Q8NGU9 434 aa4.36□□□□□ -1.71
COPS3-206ENST00000471414 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.36□□□□□ -1.71
COPS3-206ENST00000471414 CASKIN2Q8WXE0 1202 aa4.36□□□□□ -1.71
COPS3-206ENST00000471414 ALG13Q9NP73 1137 aaKnown RBP4.36□□□□□ -1.71
COPS3-206ENST00000471414 SLC23A1Q9UHI7 598 aa4.36□□□□□ -1.71
COPS3-206ENST00000471414 PIPSLA2A3N6 862 aa4.35□□□□□ -1.71
COPS3-206ENST00000471414 ELANEP08246 267 aa4.35□□□□□ -1.71
COPS3-206ENST00000471414 CPEP16870 476 aa4.35□□□□□ -1.71
COPS3-206ENST00000471414 TYRP1P17643 537 aa4.35□□□□□ -1.71
COPS3-206ENST00000471414 AGXTP21549 392 aa4.35□□□□□ -1.71
COPS3-206ENST00000471414 PTPN7P35236 360 aa4.35□□□□□ -1.71
COPS3-206ENST00000471414 WASP42768 502 aa4.35□□□□□ -1.71
COPS3-206ENST00000471414 SLC5A3P53794 718 aa4.35□□□□□ -1.71
COPS3-206ENST00000471414 CT47A1Q5JQC4 288 aaPredicted RBP4.35□□□□□ -1.71
COPS3-206ENST00000471414 HECTD2Q5U5R9 776 aa4.35□□□□□ -1.71
COPS3-206ENST00000471414 AFMIDQ63HM1 303 aa4.35□□□□□ -1.71
COPS3-206ENST00000471414 ARMC6Q6NXE6 501 aa4.35□□□□□ -1.71
COPS3-206ENST00000471414 ZNF575Q86XF7 245 aa4.35□□□□□ -1.71
COPS3-206ENST00000471414 CBARPQ8N350 705 aaPredicted RBP4.35□□□□□ -1.71
COPS3-206ENST00000471414 CPEB3Q8NE35 698 aaKnown RBP4.35□□□□□ -1.71
COPS3-206ENST00000471414 OR2I1PQ8NGU4 316 aa4.35□□□□□ -1.71
COPS3-206ENST00000471414 COQ10AQ96MF6 247 aa4.35□□□□□ -1.71
COPS3-206ENST00000471414 FAM193BQ96PV7 902 aaPredicted RBP4.35□□□□□ -1.71
COPS3-206ENST00000471414 LANCL2Q9NS86 450 aa4.35□□□□□ -1.71
COPS3-206ENST00000471414 KLHL11Q9NVR0 708 aa4.35□□□□□ -1.71
COPS3-206ENST00000471414 DNAJC28Q9NX36 388 aa4.35□□□□□ -1.71
COPS3-206ENST00000471414 USP15Q9Y4E8 981 aaPredicted RBP4.35□□□□□ -1.71
COPS3-206ENST00000471414 FPGT-TNNI3KV9GXZ4 949 aa4.35□□□□□ -1.71
COPS3-206ENST00000471414 NDUFA10O95299 355 aa4.34□□□□□ -1.71
COPS3-206ENST00000471414 SPATA31D3P0C874 917 aa4.34□□□□□ -1.71
COPS3-206ENST00000471414 EGR2P11161 476 aaPredicted RBP4.34□□□□□ -1.71
COPS3-206ENST00000471414 IL2RBP14784 551 aa4.34□□□□□ -1.71
COPS3-206ENST00000471414 FPR1P21462 350 aa4.34□□□□□ -1.71
COPS3-206ENST00000471414 GCSHP23434 173 aa4.34□□□□□ -1.71
COPS3-206ENST00000471414 PCSK1P29120 753 aa4.34□□□□□ -1.71
COPS3-206ENST00000471414 ALDH1A3P47895 512 aa4.34□□□□□ -1.71
COPS3-206ENST00000471414 FSTL1Q12841 308 aa4.34□□□□□ -1.71
COPS3-206ENST00000471414 KLF1Q13351 362 aaPredicted RBP4.34□□□□□ -1.71
COPS3-206ENST00000471414 MTM1Q13496 603 aa4.34□□□□□ -1.71
COPS3-206ENST00000471414 RRP12Q5JTH9 1297 aaKnown RBP4.34□□□□□ -1.71
COPS3-206ENST00000471414 B3GNTL1Q67FW5 361 aaPredicted RBP4.34□□□□□ -1.71
COPS3-206ENST00000471414 FAM180AQ6UWF9 173 aa4.34□□□□□ -1.71
COPS3-206ENST00000471414 SPATA31D4Q6ZUB0 917 aa4.34□□□□□ -1.71
COPS3-206ENST00000471414 SEM1Q6ZVN7 128 aa4.34□□□□□ -1.71
COPS3-206ENST00000471414 PQLC1Q8N2U9 271 aa4.34□□□□□ -1.71
COPS3-206ENST00000471414 OR56A1Q8NGH5 318 aa4.34□□□□□ -1.71
COPS3-206ENST00000471414 SSH1Q8WYL5 1049 aa4.34□□□□□ -1.71
COPS3-206ENST00000471414 MRI1Q9BV20 369 aa4.34□□□□□ -1.71
COPS3-206ENST00000471414 WDR11Q9BZH6 1224 aa4.34□□□□□ -1.71
COPS3-206ENST00000471414 SYNPO2LQ9H987 977 aa4.34□□□□□ -1.71
COPS3-206ENST00000471414 MOCS1Q9NZB8 636 aa4.34□□□□□ -1.71
COPS3-206ENST00000471414 POGKQ9P215 609 aa4.34□□□□□ -1.71
COPS3-206ENST00000471414 ANKFY1Q9P2R3 1169 aa4.34□□□□□ -1.71
COPS3-206ENST00000471414 GPR45Q9Y5Y3 372 aa4.34□□□□□ -1.71
COPS3-206ENST00000471414 EPN1Q9Y6I3 576 aaPredicted RBP4.34□□□□□ -1.71
COPS3-206ENST00000471414 ENDOD1O94919 500 aa4.33□□□□□ -1.72
COPS3-206ENST00000471414 SPDEFO95238 335 aa4.33□□□□□ -1.72
COPS3-206ENST00000471414 AMY1AP04745 511 aa4.33□□□□□ -1.72
COPS3-206ENST00000471414 FBLP22087 321 aaKnown RBP4.33□□□□□ -1.72
COPS3-206ENST00000471414 DDX6P26196 483 aaKnown RBP eCLIP4.33□□□□□ -1.72
COPS3-206ENST00000471414 OCA2Q04671 838 aa4.33□□□□□ -1.72
COPS3-206ENST00000471414 TP53BP2Q13625 1128 aa4.33□□□□□ -1.72
COPS3-206ENST00000471414 ABHD17BQ5VST6 288 aa4.33□□□□□ -1.72
COPS3-206ENST00000471414 NECAB2Q7Z6G3 386 aa4.33□□□□□ -1.72
COPS3-206ENST00000471414 FBXO18Q8NFZ0 1043 aa4.33□□□□□ -1.72
COPS3-206ENST00000471414 ASB10Q8WXI3 467 aa4.33□□□□□ -1.72
COPS3-206ENST00000471414 ZG16BQ96DA0 208 aa4.33□□□□□ -1.72
COPS3-206ENST00000471414 CYFIP2Q96F07 1278 aa4.33□□□□□ -1.72
COPS3-206ENST00000471414 FUBP3Q96I24 572 aaKnown RBP eCLIP4.33□□□□□ -1.72
COPS3-206ENST00000471414 TMEM74BQ9NUR3 256 aa4.33□□□□□ -1.72
COPS3-206ENST00000471414 AJAP1Q9UKB5 411 aaPredicted RBP4.33□□□□□ -1.72
COPS3-206ENST00000471414 CCDC78A2IDD5 438 aa4.32□□□□□ -1.72
COPS3-206ENST00000471414 FAM171A2A8MVW0 826 aa4.32□□□□□ -1.72
COPS3-206ENST00000471414 OSMP13725 252 aa4.32□□□□□ -1.72
COPS3-206ENST00000471414 GSPT1P15170 499 aaKnown RBP4.32□□□□□ -1.72
COPS3-206ENST00000471414 ATP5JP18859 108 aa4.32□□□□□ -1.72
COPS3-206ENST00000471414 SEC24CP53992 1094 aa4.32□□□□□ -1.72
COPS3-206ENST00000471414 BLOC1S1P78537 153 aa4.32□□□□□ -1.72
COPS3-206ENST00000471414 GUCY1B3Q02153 619 aa4.32□□□□□ -1.72
COPS3-206ENST00000471414 OLFML1Q6UWY5 402 aa4.32□□□□□ -1.72
COPS3-206ENST00000471414 TMEM132CQ8N3T6 1108 aa4.32□□□□□ -1.72
COPS3-206ENST00000471414 ZGPATQ8N5A5 531 aaKnown RBP4.32□□□□□ -1.72
COPS3-206ENST00000471414 ADI1Q9BV57 179 aa4.32□□□□□ -1.72
COPS3-206ENST00000471414 PUS7LQ9H0K6 701 aaKnown RBP4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms