RNA–Protein interactions for RNA: ENST00000470886.1

RRP1B-202, Transcript of ribosomal RNA processing 1B, humanhuman

TSL 2

Gene RRP1B, Length 4,634 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-202ENST00000470886 LRRC14Q15048 493 aa11.16□□□□□ -0.62
RRP1B-202ENST00000470886 ZC3H18Q86VM9 953 aaKnown RBP11.16□□□□□ -0.62
RRP1B-202ENST00000470886 RTKN2Q8IZC4 609 aa11.16□□□□□ -0.62
RRP1B-202ENST00000470886 MARCH10Q8NA82 808 aaPredicted RBP11.16□□□□□ -0.62
RRP1B-202ENST00000470886 RNF25Q96BH1 459 aaPredicted RBP11.16□□□□□ -0.62
RRP1B-202ENST00000470886 MED10Q9BTT4 135 aa11.16□□□□□ -0.62
RRP1B-202ENST00000470886 SMARCAL1Q9NZC9 954 aa11.16□□□□□ -0.62
RRP1B-202ENST00000470886 NXF1Q9UBU9 619 aaKnown RBP11.16□□□□□ -0.62
RRP1B-202ENST00000470886 PCDHB2Q9Y5E7 798 aa11.16□□□□□ -0.62
RRP1B-202ENST00000470886 CLRN2A0PK11 232 aa11.16□□□□□ -0.62
RRP1B-202ENST00000470886 CD58P19256 250 aa11.16□□□□□ -0.62
RRP1B-202ENST00000470886 COG7P83436 770 aa11.16□□□□□ -0.62
RRP1B-202ENST00000470886 DNAL1Q4LDG9 190 aa11.16□□□□□ -0.62
RRP1B-202ENST00000470886 LRRC23Q53EV4 343 aaPredicted RBP11.16□□□□□ -0.62
RRP1B-202ENST00000470886 TEDDM1Q5T9Z0 273 aa11.16□□□□□ -0.62
RRP1B-202ENST00000470886 RAB44Q7Z6P3 723 aaPredicted RBP11.16□□□□□ -0.62
RRP1B-202ENST00000470886 SLC13A5Q86YT5 568 aaPredicted RBP11.16□□□□□ -0.62
RRP1B-202ENST00000470886 CDKL3Q8IVW4 592 aaPredicted RBP11.16□□□□□ -0.62
RRP1B-202ENST00000470886 MREGQ8N565 214 aa11.16□□□□□ -0.62
RRP1B-202ENST00000470886 TAB3Q8N5C8 712 aaPredicted RBP11.16□□□□□ -0.62
RRP1B-202ENST00000470886 RBM15Q96T37 977 aaKnown RBP eCLIP11.16□□□□□ -0.624e-8■■■□□ 15.8
RRP1B-202ENST00000470886 RIOX1Q9H6W3 641 aa11.16□□□□□ -0.62
RRP1B-202ENST00000470886 TMEM8AQ9HCN3 771 aa11.16□□□□□ -0.62
RRP1B-202ENST00000470886 SEPT10Q9P0V9 454 aa11.16□□□□□ -0.62
RRP1B-202ENST00000470886 DUOX1Q9NRD9 1551 aa11.16□□□□□ -0.62
RRP1B-202ENST00000470886 RGPD5Q99666 1765 aa11.15□□□□□ -0.62
RRP1B-202ENST00000470886 COMTP21964 271 aa11.15□□□□□ -0.62
RRP1B-202ENST00000470886 ARSEP51690 589 aa11.15□□□□□ -0.62
RRP1B-202ENST00000470886 KYAT1Q16773 422 aa11.15□□□□□ -0.62
RRP1B-202ENST00000470886 RAPH1Q70E73 1250 aa11.15□□□□□ -0.62
RRP1B-202ENST00000470886 OR2W6PQ8NHA6 318 aa11.15□□□□□ -0.62
RRP1B-202ENST00000470886 RAPGEF5Q92565 580 aa11.15□□□□□ -0.62
RRP1B-202ENST00000470886 MTRQ99707 1265 aa11.15□□□□□ -0.62
RRP1B-202ENST00000470886 SENP7Q9BQF6 1050 aa11.15□□□□□ -0.62
RRP1B-202ENST00000470886 RANBP17Q9H2T7 1088 aaKnown RBP11.15□□□□□ -0.62
RRP1B-202ENST00000470886 GEMIN8Q9NWZ8 242 aaKnown RBP11.15□□□□□ -0.62
RRP1B-202ENST00000470886 PCDHA10Q9Y5I2 948 aa11.15□□□□□ -0.62
RRP1B-202ENST00000470886 DUSP10Q9Y6W6 482 aa11.15□□□□□ -0.62
RRP1B-202ENST00000470886 TMEM120BA0PK00 339 aa11.15□□□□□ -0.62
RRP1B-202ENST00000470886 DCAF8L1A6NGE4 600 aa11.15□□□□□ -0.62
RRP1B-202ENST00000470886 UBE2Q2LH0YL09 131 aa11.15□□□□□ -0.62
RRP1B-202ENST00000470886 POLE2P56282 527 aa11.15□□□□□ -0.62
RRP1B-202ENST00000470886 COPS2P61201 443 aa11.15□□□□□ -0.62
RRP1B-202ENST00000470886 PIGHQ14442 188 aaPredicted RBP11.15□□□□□ -0.62
RRP1B-202ENST00000470886 SDCCAG3Q96C92 435 aa11.15□□□□□ -0.62
RRP1B-202ENST00000470886 GPR101Q96P66 508 aaPredicted RBP11.15□□□□□ -0.62
RRP1B-202ENST00000470886 DUSP9Q99956 384 aaKnown RBP11.15□□□□□ -0.62
RRP1B-202ENST00000470886 ZWILCHQ9H900 591 aa11.15□□□□□ -0.62
RRP1B-202ENST00000470886 CFAP69A5D8W1 941 aa11.15□□□□□ -0.62
RRP1B-202ENST00000470886 DGAT1O75907 488 aa11.15□□□□□ -0.62
RRP1B-202ENST00000470886 APBA3O96018 575 aa11.15□□□□□ -0.62
RRP1B-202ENST00000470886 MRPS35P82673 323 aaKnown RBP11.15□□□□□ -0.62
RRP1B-202ENST00000470886 SLC29A2Q14542 456 aa11.15□□□□□ -0.62
RRP1B-202ENST00000470886 CRYMQ14894 314 aa11.15□□□□□ -0.62
RRP1B-202ENST00000470886 ZNF699Q32M78 642 aa11.15□□□□□ -0.62
RRP1B-202ENST00000470886 C11orf63Q6NUN7 778 aa11.15□□□□□ -0.62
RRP1B-202ENST00000470886 C4orf22Q6V702 233 aa11.15□□□□□ -0.62
RRP1B-202ENST00000470886 CATSPER1Q8NEC5 780 aa11.15□□□□□ -0.62
RRP1B-202ENST00000470886 RDM1Q8NG50 284 aa11.15□□□□□ -0.62
RRP1B-202ENST00000470886 ZNF507Q8TCN5 953 aa11.15□□□□□ -0.62
RRP1B-202ENST00000470886 C17orf75Q9HAS0 396 aa11.15□□□□□ -0.62
RRP1B-202ENST00000470886 INTS13Q9NVM9 706 aa11.15□□□□□ -0.62
RRP1B-202ENST00000470886 MTO1Q9Y2Z2 717 aaKnown RBP11.15□□□□□ -0.62
RRP1B-202ENST00000470886 EFNA5P52803 228 aa11.15□□□□□ -0.63
RRP1B-202ENST00000470886 ROR1Q01973 937 aa11.15□□□□□ -0.63
RRP1B-202ENST00000470886 ART3Q13508 389 aa11.15□□□□□ -0.63
RRP1B-202ENST00000470886 KCTD2Q14681 263 aa11.15□□□□□ -0.63
RRP1B-202ENST00000470886 MAPK6Q16659 721 aa11.15□□□□□ -0.63
RRP1B-202ENST00000470886 XRRA1Q6P2D8 792 aa11.15□□□□□ -0.63
RRP1B-202ENST00000470886 CREG2Q8IUH2 290 aa11.15□□□□□ -0.63
RRP1B-202ENST00000470886 LINC00116Q8NCU8 138 aa11.15□□□□□ -0.63
RRP1B-202ENST00000470886 TBC1D16Q8TBP0 767 aa11.15□□□□□ -0.63
RRP1B-202ENST00000470886 DDX27Q96GQ7 796 aaKnown RBP11.15□□□□□ -0.63
RRP1B-202ENST00000470886 SNX25Q9H3E2 840 aa11.15□□□□□ -0.63
RRP1B-202ENST00000470886 MRGBPQ9NV56 204 aa11.15□□□□□ -0.63
RRP1B-202ENST00000470886 RGL1Q9NZL6 768 aa11.15□□□□□ -0.63
RRP1B-202ENST00000470886 CASZ1Q86V15 1759 aa11.14□□□□□ -0.63
RRP1B-202ENST00000470886 SNAP25P60880 206 aa11.14□□□□□ -0.63
RRP1B-202ENST00000470886 COL9A3Q14050 684 aaPredicted RBP11.14□□□□□ -0.63
RRP1B-202ENST00000470886 CATSPER3Q86XQ3 398 aa11.14□□□□□ -0.63
RRP1B-202ENST00000470886 DNAAF3Q8N9W5 541 aa11.14□□□□□ -0.63
RRP1B-202ENST00000470886 SPDL1Q96EA4 605 aa11.14□□□□□ -0.63
RRP1B-202ENST00000470886 HEXIM2Q96MH2 286 aaKnown RBP11.14□□□□□ -0.63
RRP1B-202ENST00000470886 SH3GL3Q99963 347 aa11.14□□□□□ -0.63
RRP1B-202ENST00000470886 SLC9A2Q9UBY0 812 aa11.14□□□□□ -0.63
RRP1B-202ENST00000470886 TRAF3IP3Q9Y228 551 aa11.14□□□□□ -0.63
RRP1B-202ENST00000470886 GINS2Q9Y248 185 aa11.14□□□□□ -0.63
RRP1B-202ENST00000470886 ROBO3Q96MS0 1386 aa11.14□□□□□ -0.63
RRP1B-202ENST00000470886 BTNL10A8MVZ5 291 aa11.14□□□□□ -0.63
RRP1B-202ENST00000470886 ZBTB22O15209 634 aa11.14□□□□□ -0.63
RRP1B-202ENST00000470886 ZC3H11AO75152 810 aaKnown RBP eCLIP11.14□□□□□ -0.636e-9■□□□□ 10
RRP1B-202ENST00000470886 FSBPO95073 299 aa11.14□□□□□ -0.63
RRP1B-202ENST00000470886 HNRNPH3P31942 346 aaKnown RBP11.14□□□□□ -0.63
RRP1B-202ENST00000470886 YWHABP31946 246 aaKnown RBP11.14□□□□□ -0.63
RRP1B-202ENST00000470886 PTENP60484 403 aa11.14□□□□□ -0.63
RRP1B-202ENST00000470886 STXBP2Q15833 593 aa11.14□□□□□ -0.63
RRP1B-202ENST00000470886 TAF1BQ53T94 588 aaPredicted RBP11.14□□□□□ -0.63
RRP1B-202ENST00000470886 C1orf146Q5VVC0 180 aa11.14□□□□□ -0.63
RRP1B-202ENST00000470886 ARMCX2Q7L311 632 aa11.14□□□□□ -0.63
RRP1B-202ENST00000470886 DDX42Q86XP3 938 aaKnown RBP eCLIP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms