RNA–Protein interactions for RNA: ENST00000470687.1

UBXN4-206, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-206ENST00000470687 NTN5Q8WTR8 489 aaPredicted RBP3.54□□□□□ -1.84
UBXN4-206ENST00000470687 JADE3Q92613 823 aa3.54□□□□□ -1.84
UBXN4-206ENST00000470687 DMRTA2Q96SC8 542 aa3.54□□□□□ -1.84
UBXN4-206ENST00000470687 ENKD1Q9H0I2 346 aa3.54□□□□□ -1.84
UBXN4-206ENST00000470687 KCTD10Q9H3F6 313 aa3.54□□□□□ -1.84
UBXN4-206ENST00000470687 MTG2Q9H4K7 406 aa3.54□□□□□ -1.84
UBXN4-206ENST00000470687 KLHL42Q9P2K6 505 aa3.54□□□□□ -1.84
UBXN4-206ENST00000470687 PRSS50Q9UI38 385 aa3.54□□□□□ -1.84
UBXN4-206ENST00000470687 NUB1Q9Y5A7 615 aa3.54□□□□□ -1.84
UBXN4-206ENST00000470687 ABCC3O15438 1527 aa3.54□□□□□ -1.84
UBXN4-206ENST00000470687 ABCC5O15440 1437 aa3.53□□□□□ -1.84
UBXN4-206ENST00000470687 DAPK1P53355 1430 aa3.53□□□□□ -1.84
UBXN4-206ENST00000470687 ANKRD50Q9ULJ7 1429 aa3.53□□□□□ -1.84
UBXN4-206ENST00000470687 MSH6P52701 1360 aa3.53□□□□□ -1.84
UBXN4-206ENST00000470687 IQGAP1P46940 1657 aa3.53□□□□□ -1.84
UBXN4-206ENST00000470687 SPATA31A6Q5VVP1 1343 aa3.53□□□□□ -1.84
UBXN4-206ENST00000470687 ABLIM3O94929 683 aa3.53□□□□□ -1.84
UBXN4-206ENST00000470687 NUDT3O95989 172 aa3.53□□□□□ -1.84
UBXN4-206ENST00000470687 MT-CO1P00395 513 aa3.53□□□□□ -1.84
UBXN4-206ENST00000470687 LMNAP02545 664 aaKnown RBP3.53□□□□□ -1.84
UBXN4-206ENST00000470687 HMGCRP04035 888 aa3.53□□□□□ -1.84
UBXN4-206ENST00000470687 ATF3P18847 181 aa3.53□□□□□ -1.84
UBXN4-206ENST00000470687 C5AR1P21730 350 aa3.53□□□□□ -1.84
UBXN4-206ENST00000470687 CD69Q07108 199 aa3.53□□□□□ -1.84
UBXN4-206ENST00000470687 CRHR2Q13324 411 aa3.53□□□□□ -1.84
UBXN4-206ENST00000470687 KLF1Q13351 362 aaPredicted RBP3.53□□□□□ -1.84
UBXN4-206ENST00000470687 PCOLCEQ15113 449 aa3.53□□□□□ -1.84
UBXN4-206ENST00000470687 FSCN1Q16658 493 aaKnown RBP3.53□□□□□ -1.84
UBXN4-206ENST00000470687 WDR72Q3MJ13 1102 aa3.53□□□□□ -1.84
UBXN4-206ENST00000470687 TTC38Q5R3I4 469 aa3.53□□□□□ -1.84
UBXN4-206ENST00000470687 SYDE2Q5VT97 1194 aa3.53□□□□□ -1.84
UBXN4-206ENST00000470687 ZKSCAN2Q63HK3 967 aa3.53□□□□□ -1.84
UBXN4-206ENST00000470687 ZNF772Q68DY9 489 aaPredicted RBP3.53□□□□□ -1.84
UBXN4-206ENST00000470687 SLFN12LQ6IEE8 588 aa3.53□□□□□ -1.84
UBXN4-206ENST00000470687 ABHD15Q6UXT9 468 aa3.53□□□□□ -1.84
UBXN4-206ENST00000470687 Q6ZVL8 140 aa3.53□□□□□ -1.84
UBXN4-206ENST00000470687 USP30Q70CQ3 517 aa3.53□□□□□ -1.84
UBXN4-206ENST00000470687 HDGFL2Q7Z4V5 671 aaPredicted RBP3.53□□□□□ -1.84
UBXN4-206ENST00000470687 HIPK4Q8NE63 616 aa3.53□□□□□ -1.84
UBXN4-206ENST00000470687 OR5AN1Q8NGI8 311 aa3.53□□□□□ -1.84
UBXN4-206ENST00000470687 GPR150Q8NGU9 434 aa3.53□□□□□ -1.84
UBXN4-206ENST00000470687 ATL2Q8NHH9 583 aa3.53□□□□□ -1.84
UBXN4-206ENST00000470687 FUBP3Q96I24 572 aaKnown RBP eCLIP3.53□□□□□ -1.84
UBXN4-206ENST00000470687 FAXDC2Q96IV6 333 aa3.53□□□□□ -1.84
UBXN4-206ENST00000470687 RHOBTB2Q9BYZ6 727 aa3.53□□□□□ -1.84
UBXN4-206ENST00000470687 PUS7LQ9H0K6 701 aaKnown RBP3.53□□□□□ -1.84
UBXN4-206ENST00000470687 DMRT3Q9NQL9 472 aa3.53□□□□□ -1.84
UBXN4-206ENST00000470687 PTGFRNQ9P2B2 879 aa3.53□□□□□ -1.84
UBXN4-206ENST00000470687 SIK3Q9Y2K2 1263 aa3.53□□□□□ -1.84
UBXN4-206ENST00000470687 SYNMO15061 1565 aa3.53□□□□□ -1.84
UBXN4-206ENST00000470687 PRDM15P57071 1507 aaPredicted RBP3.53□□□□□ -1.84
UBXN4-206ENST00000470687 LRRC7Q96NW7 1537 aa3.53□□□□□ -1.84
UBXN4-206ENST00000470687 NOS1P29475 1434 aa3.53□□□□□ -1.85
UBXN4-206ENST00000470687 FGD6Q6ZV73 1430 aa3.53□□□□□ -1.85
UBXN4-206ENST00000470687 RPGRIP1LQ68CZ1 1315 aa3.52□□□□□ -1.85
UBXN4-206ENST00000470687 VWDEQ8N2E2 1590 aa3.52□□□□□ -1.85
UBXN4-206ENST00000470687 A0A1W2PR48 441 aa3.52□□□□□ -1.85
UBXN4-206ENST00000470687 MASP2O00187 686 aa3.52□□□□□ -1.85
UBXN4-206ENST00000470687 AKAP10O43572 662 aa3.52□□□□□ -1.85
UBXN4-206ENST00000470687 HIP1RO75146 1068 aa3.52□□□□□ -1.85
UBXN4-206ENST00000470687 GCP02774 474 aa3.52□□□□□ -1.85
UBXN4-206ENST00000470687 AGXTP21549 392 aa3.52□□□□□ -1.85
UBXN4-206ENST00000470687 ENPP1P22413 925 aa3.52□□□□□ -1.85
UBXN4-206ENST00000470687 CD40P25942 277 aa3.52□□□□□ -1.85
UBXN4-206ENST00000470687 LSP1P33241 339 aa3.52□□□□□ -1.85
UBXN4-206ENST00000470687 SLC6A9P48067 706 aa3.52□□□□□ -1.85
UBXN4-206ENST00000470687 KCNQ1P51787 676 aa3.52□□□□□ -1.85
UBXN4-206ENST00000470687 SESN3P58005 492 aa3.52□□□□□ -1.85
UBXN4-206ENST00000470687 C21orf58P58505 322 aa3.52□□□□□ -1.85
UBXN4-206ENST00000470687 ADCY2Q08462 1091 aa3.52□□□□□ -1.85
UBXN4-206ENST00000470687 GALEQ14376 348 aa3.52□□□□□ -1.85
UBXN4-206ENST00000470687 TTF1Q15361 905 aaPredicted RBP3.52□□□□□ -1.85
UBXN4-206ENST00000470687 ZNF174Q15697 407 aa3.52□□□□□ -1.85
UBXN4-206ENST00000470687 TOR2AQ5JU69 321 aa3.52□□□□□ -1.85
UBXN4-206ENST00000470687 CCDC62Q6P9F0 684 aa3.52□□□□□ -1.85
UBXN4-206ENST00000470687 FRMD7Q6ZUT3 714 aa3.52□□□□□ -1.85
UBXN4-206ENST00000470687 COL23A1Q86Y22 540 aaPredicted RBP3.52□□□□□ -1.85
UBXN4-206ENST00000470687 PHYKPLQ8IUZ5 450 aa3.52□□□□□ -1.85
UBXN4-206ENST00000470687 TSR2Q969E8 191 aaKnown RBP3.52□□□□□ -1.85
UBXN4-206ENST00000470687 AHCYL2Q96HN2 611 aaKnown RBP3.52□□□□□ -1.85
UBXN4-206ENST00000470687 TMEM176AQ96HP8 235 aa3.52□□□□□ -1.85
UBXN4-206ENST00000470687 TUBGCP5Q96RT8 1024 aa3.52□□□□□ -1.85
UBXN4-206ENST00000470687 GPHA2Q96T91 129 aa3.52□□□□□ -1.85
UBXN4-206ENST00000470687 CTDP1Q9Y5B0 961 aaPredicted RBP3.52□□□□□ -1.85
UBXN4-206ENST00000470687 NUMBLQ9Y6R0 609 aa3.52□□□□□ -1.85
UBXN4-206ENST00000470687 EFCAB6Q5THR3 1501 aa3.52□□□□□ -1.85
UBXN4-206ENST00000470687 ADGRL2O95490 1459 aa3.52□□□□□ -1.85
UBXN4-206ENST00000470687 NKTRP30414 1462 aaKnown RBP3.52□□□□□ -1.85
UBXN4-206ENST00000470687 CFAP65Q6ZU64 1925 aaKnown RBP3.52□□□□□ -1.85
UBXN4-206ENST00000470687 PTPN23Q9H3S7 1636 aa3.52□□□□□ -1.85
UBXN4-206ENST00000470687 PLEKHG1Q9ULL1 1385 aa3.51□□□□□ -1.85
UBXN4-206ENST00000470687 NEURL4Q96JN8 1562 aa3.51□□□□□ -1.85
UBXN4-206ENST00000470687 UBR1Q8IWV7 1749 aa3.51□□□□□ -1.85
UBXN4-206ENST00000470687 RPS6KA4O75676 772 aa3.51□□□□□ -1.85
UBXN4-206ENST00000470687 ALDH1L1O75891 902 aa3.51□□□□□ -1.85
UBXN4-206ENST00000470687 PCDH8O95206 1070 aa3.51□□□□□ -1.85
UBXN4-206ENST00000470687 LY86O95711 162 aa3.51□□□□□ -1.85
UBXN4-206ENST00000470687 GAAP10253 952 aa3.51□□□□□ -1.85
UBXN4-206ENST00000470687 OSMP13725 252 aa3.51□□□□□ -1.85
UBXN4-206ENST00000470687 RAB27AP51159 221 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms