RNA–Protein interactions for RNA: ENST00000468117.1

TMEM53-207, Transcript of transmembrane protein 53, humanhuman

TSL 3

Gene TMEM53, Length 2,017 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-207ENST00000468117 TSKSQ9UJT2 592 aa22.26■■□□□ 1.15
TMEM53-207ENST00000468117 CITO14578 2027 aa22.26■■□□□ 1.15
TMEM53-207ENST00000468117 RBAK-RBAKDNI3L0D1 243 aa22.26■■□□□ 1.15
TMEM53-207ENST00000468117 ZNF263O14978 683 aa22.26■■□□□ 1.15
TMEM53-207ENST00000468117 AKR1B10O60218 316 aa22.26■■□□□ 1.15
TMEM53-207ENST00000468117 C4BPAP04003 597 aaKnown RBP22.26■■□□□ 1.15
TMEM53-207ENST00000468117 MAPK8IP2Q13387 824 aaPredicted RBP22.26■■□□□ 1.15
TMEM53-207ENST00000468117 ZACNQ401N2 412 aa22.26■■□□□ 1.15
TMEM53-207ENST00000468117 TDRD10Q5VZ19 366 aaKnown RBP22.26■■□□□ 1.15
TMEM53-207ENST00000468117 TMEM192Q8IY95 271 aa22.26■■□□□ 1.15
TMEM53-207ENST00000468117 KLHDC9Q8NEP7 349 aa22.26■■□□□ 1.15
TMEM53-207ENST00000468117 HAUS4Q9H6D7 363 aa22.26■■□□□ 1.15
TMEM53-207ENST00000468117 DDX20Q9UHI6 824 aaKnown RBP22.26■■□□□ 1.15
TMEM53-207ENST00000468117 SSU72P8A0A1W2PR75 194 aa22.25■■□□□ 1.15
TMEM53-207ENST00000468117 GFPT2O94808 682 aa22.25■■□□□ 1.15
TMEM53-207ENST00000468117 IPO7O95373 1038 aaKnown RBP22.25■■□□□ 1.15
TMEM53-207ENST00000468117 RFX1P22670 979 aa22.25■■□□□ 1.15
TMEM53-207ENST00000468117 STAT1P42224 750 aa22.25■■□□□ 1.15
TMEM53-207ENST00000468117 BIRC3Q13489 604 aa22.25■■□□□ 1.15
TMEM53-207ENST00000468117 ASTE1Q2TB18 679 aaPredicted RBP22.25■■□□□ 1.15
TMEM53-207ENST00000468117 OR5B17Q8NGF7 314 aa22.25■■□□□ 1.15
TMEM53-207ENST00000468117 SAGE1Q9NXZ1 904 aa22.25■■□□□ 1.15
TMEM53-207ENST00000468117 GTF2IRD1Q9UHL9 959 aa22.25■■□□□ 1.15
TMEM53-207ENST00000468117 TRIP11Q15643 1979 aa22.25■■□□□ 1.15
TMEM53-207ENST00000468117 ABL1P00519 1130 aa22.24■■□□□ 1.15
TMEM53-207ENST00000468117 SOX5P35711 763 aa22.24■■□□□ 1.15
TMEM53-207ENST00000468117 FAM47CQ5HY64 1035 aa22.24■■□□□ 1.15
TMEM53-207ENST00000468117 CCSAPQ6IQ19 270 aaPredicted RBP22.24■■□□□ 1.15
TMEM53-207ENST00000468117 PPM1KQ8N3J5 372 aa22.24■■□□□ 1.15
TMEM53-207ENST00000468117 ZNF592Q92610 1267 aa22.24■■□□□ 1.15
TMEM53-207ENST00000468117 KAT5Q92993 513 aa22.24■■□□□ 1.15
TMEM53-207ENST00000468117 PI4K2AQ9BTU6 479 aa22.24■■□□□ 1.15
TMEM53-207ENST00000468117 TFR2Q9UP52 801 aa22.24■■□□□ 1.15
TMEM53-207ENST00000468117 DAAM1Q9Y4D1 1078 aa22.24■■□□□ 1.15
TMEM53-207ENST00000468117 KRT83P78385 493 aa22.24■■□□□ 1.15
TMEM53-207ENST00000468117 PTK2Q05397 1052 aa22.24■■□□□ 1.15
TMEM53-207ENST00000468117 GFPT1Q06210 699 aaPredicted RBP22.24■■□□□ 1.15
TMEM53-207ENST00000468117 GDF6Q6KF10 455 aaPredicted RBP22.24■■□□□ 1.15
TMEM53-207ENST00000468117 A0A1B0GUA9 196 aa22.23■■□□□ 1.15
TMEM53-207ENST00000468117 INHAP05111 366 aa22.23■■□□□ 1.15
TMEM53-207ENST00000468117 MCF2P10911 925 aa22.23■■□□□ 1.15
TMEM53-207ENST00000468117 DARSP14868 501 aaKnown RBP22.23■■□□□ 1.15
TMEM53-207ENST00000468117 ARHGAP29Q52LW3 1261 aa22.23■■□□□ 1.15
TMEM53-207ENST00000468117 CATSPER4Q7RTX7 472 aa22.23■■□□□ 1.15
TMEM53-207ENST00000468117 TMEM40Q8WWA1 233 aa22.23■■□□□ 1.15
TMEM53-207ENST00000468117 IRX2Q9BZI1 471 aaPredicted RBP22.23■■□□□ 1.15
TMEM53-207ENST00000468117 FOXN3O00409 490 aaPredicted RBP22.23■■□□□ 1.15
TMEM53-207ENST00000468117 EVI5O60447 810 aa22.23■■□□□ 1.15
TMEM53-207ENST00000468117 LCA5LO95447 670 aa22.23■■□□□ 1.15
TMEM53-207ENST00000468117 VNN1O95497 513 aa22.23■■□□□ 1.15
TMEM53-207ENST00000468117 HLA-DRAP01903 254 aa22.23■■□□□ 1.15
TMEM53-207ENST00000468117 CXCL8P10145 99 aa22.23■■□□□ 1.15
TMEM53-207ENST00000468117 EIF4BP23588 611 aaKnown RBP22.23■■□□□ 1.15
TMEM53-207ENST00000468117 CST5P28325 142 aaPredicted RBP22.23■■□□□ 1.15
TMEM53-207ENST00000468117 ARHGEF6Q15052 776 aa22.23■■□□□ 1.15
TMEM53-207ENST00000468117 SPA17Q15506 151 aa22.23■■□□□ 1.15
TMEM53-207ENST00000468117 SYT10Q6XYQ8 523 aa22.23■■□□□ 1.15
TMEM53-207ENST00000468117 WDR49Q8IV35 697 aa22.23■■□□□ 1.15
TMEM53-207ENST00000468117 NT5C1BQ96P26 610 aa22.23■■□□□ 1.15
TMEM53-207ENST00000468117 FRMPD3Q5JV73 1810 aa22.22■■□□□ 1.15
TMEM53-207ENST00000468117 KIF2AO00139 706 aaPredicted RBP22.22■■□□□ 1.15
TMEM53-207ENST00000468117 STAG3L1P0CL83 205 aa22.22■■□□□ 1.15
TMEM53-207ENST00000468117 FERP16591 822 aa22.22■■□□□ 1.15
TMEM53-207ENST00000468117 HOXA11P31270 313 aaPredicted RBP22.22■■□□□ 1.15
TMEM53-207ENST00000468117 PRKCIP41743 596 aa22.22■■□□□ 1.15
TMEM53-207ENST00000468117 ARHGAP25P42331 645 aa22.22■■□□□ 1.15
TMEM53-207ENST00000468117 PIK3CAP42336 1068 aa22.22■■□□□ 1.15
TMEM53-207ENST00000468117 SNX17Q15036 470 aa22.22■■□□□ 1.15
TMEM53-207ENST00000468117 TAF2Q6P1X5 1199 aa22.22■■□□□ 1.15
TMEM53-207ENST00000468117 ZNF571Q7Z3V5 609 aaPredicted RBP22.22■■□□□ 1.15
TMEM53-207ENST00000468117 KIAA1328Q86T90 577 aa22.22■■□□□ 1.15
TMEM53-207ENST00000468117 TATDN2Q93075 761 aa22.22■■□□□ 1.15
TMEM53-207ENST00000468117 KREMEN1Q96MU8 473 aa22.22■■□□□ 1.15
TMEM53-207ENST00000468117 BZW2Q9Y6E2 419 aaKnown RBP22.22■■□□□ 1.15
TMEM53-207ENST00000468117 ETF1P62495 437 aaKnown RBP22.21■■□□□ 1.15
TMEM53-207ENST00000468117 NME8Q8N427 588 aa22.21■■□□□ 1.15
TMEM53-207ENST00000468117 PCSK9Q8NBP7 692 aaKnown RBP22.21■■□□□ 1.15
TMEM53-207ENST00000468117 SLAIN1Q8ND83 568 aa22.21■■□□□ 1.15
TMEM53-207ENST00000468117 HELQQ8TDG4 1101 aa22.21■■□□□ 1.15
TMEM53-207ENST00000468117 ADPGKQ9BRR6 497 aa22.21■■□□□ 1.15
TMEM53-207ENST00000468117 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP22.21■■□□□ 1.15
TMEM53-207ENST00000468117 MTMR12Q9C0I1 747 aa22.21■■□□□ 1.15
TMEM53-207ENST00000468117 RPF1Q9H9Y2 349 aaKnown RBP22.21■■□□□ 1.15
TMEM53-207ENST00000468117 TRIM10Q9UDY6 481 aa22.21■■□□□ 1.15
TMEM53-207ENST00000468117 ADAMTS1Q9UHI8 967 aa22.21■■□□□ 1.15
TMEM53-207ENST00000468117 RCCD1A6NED2 376 aa22.21■■□□□ 1.15
TMEM53-207ENST00000468117 GRK4P32298 578 aa22.21■■□□□ 1.15
TMEM53-207ENST00000468117 SURF1Q15526 300 aa22.21■■□□□ 1.15
TMEM53-207ENST00000468117 SCARA3Q6AZY7 606 aa22.21■■□□□ 1.15
TMEM53-207ENST00000468117 RNF180Q86T96 592 aa22.21■■□□□ 1.15
TMEM53-207ENST00000468117 IFIH1Q9BYX4 1025 aaKnown RBP22.21■■□□□ 1.15
TMEM53-207ENST00000468117 TRIM17Q9Y577 477 aa22.21■■□□□ 1.15
TMEM53-207ENST00000468117 GRIN2DO15399 1336 aa22.21■■□□□ 1.15
TMEM53-207ENST00000468117 A0A087X0T9 212 aa22.2■■□□□ 1.14
TMEM53-207ENST00000468117 CLTAP09496 248 aa22.2■■□□□ 1.14
TMEM53-207ENST00000468117 FAM228BP0C875 321 aa22.2■■□□□ 1.14
TMEM53-207ENST00000468117 NCBP1Q09161 790 aaKnown RBP22.2■■□□□ 1.14
TMEM53-207ENST00000468117 EFCAB13Q8IY85 973 aa22.2■■□□□ 1.14
TMEM53-207ENST00000468117 LACRTQ9GZZ8 138 aa22.2■■□□□ 1.14
TMEM53-207ENST00000468117 PCDHA13Q9Y5I0 950 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms