RNA–Protein interactions for RNA: ENST00000467182.1

COL4A1-202, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 3

Gene COL4A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-202ENST00000467182 ZBED6P86452 979 aa14.09□□□□□ -0.15
COL4A1-202ENST00000467182 SLC10A6Q3KNW5 377 aa14.09□□□□□ -0.15
COL4A1-202ENST00000467182 DCAF4L1Q3SXM0 396 aa14.09□□□□□ -0.15
COL4A1-202ENST00000467182 ZACNQ401N2 412 aa14.09□□□□□ -0.15
COL4A1-202ENST00000467182 FBXO47Q5MNV8 452 aa14.09□□□□□ -0.15
COL4A1-202ENST00000467182 ZNF618Q5T7W0 954 aa14.09□□□□□ -0.15
COL4A1-202ENST00000467182 LMBRD2Q68DH5 695 aaPredicted RBP14.09□□□□□ -0.15
COL4A1-202ENST00000467182 SCARA3Q6AZY7 606 aa14.09□□□□□ -0.15
COL4A1-202ENST00000467182 NOTUMQ6P988 496 aa14.09□□□□□ -0.15
COL4A1-202ENST00000467182 SV2AQ7L0J3 742 aa14.09□□□□□ -0.15
COL4A1-202ENST00000467182 CNGA4Q8IV77 575 aa14.09□□□□□ -0.15
COL4A1-202ENST00000467182 OR5B17Q8NGF7 314 aa14.09□□□□□ -0.15
COL4A1-202ENST00000467182 CCDC51Q96ER9 411 aa14.09□□□□□ -0.15
COL4A1-202ENST00000467182 AGO3Q9H9G7 860 aaKnown RBP14.09□□□□□ -0.15
COL4A1-202ENST00000467182 ERVK-5Q9HDB9 667 aa14.09□□□□□ -0.15
COL4A1-202ENST00000467182 CEP72Q9P209 647 aa14.09□□□□□ -0.15
COL4A1-202ENST00000467182 FBXL5Q9UKA1 691 aa14.09□□□□□ -0.15
COL4A1-202ENST00000467182 PYCARDQ9ULZ3 195 aa14.09□□□□□ -0.15
COL4A1-202ENST00000467182 ZKSCAN5Q9Y2L8 839 aa14.09□□□□□ -0.15
COL4A1-202ENST00000467182 PDCD11Q14690 1871 aaKnown RBP14.09□□□□□ -0.15
COL4A1-202ENST00000467182 RPS6KA5O75582 802 aa14.08□□□□□ -0.16
COL4A1-202ENST00000467182 VNN1O95497 513 aa14.08□□□□□ -0.16
COL4A1-202ENST00000467182 COL6A1P12109 1028 aa14.08□□□□□ -0.16
COL4A1-202ENST00000467182 CKBP12277 381 aa14.08□□□□□ -0.16
COL4A1-202ENST00000467182 LPIN1Q14693 890 aa14.08□□□□□ -0.16
COL4A1-202ENST00000467182 MBTPS1Q14703 1052 aa14.08□□□□□ -0.16
COL4A1-202ENST00000467182 KYAT1Q16773 422 aa14.08□□□□□ -0.16
COL4A1-202ENST00000467182 TDRD10Q5VZ19 366 aaKnown RBP14.08□□□□□ -0.16
COL4A1-202ENST00000467182 E4F1Q66K89 784 aaPredicted RBP14.08□□□□□ -0.16
COL4A1-202ENST00000467182 PDXDC1Q6P996 788 aa14.08□□□□□ -0.16
COL4A1-202ENST00000467182 GJB7Q6PEY0 223 aa14.08□□□□□ -0.16
COL4A1-202ENST00000467182 WDR59Q6PJI9 974 aa14.08□□□□□ -0.16
COL4A1-202ENST00000467182 USP37Q86T82 979 aa14.08□□□□□ -0.16
COL4A1-202ENST00000467182 WDR49Q8IV35 697 aa14.08□□□□□ -0.16
COL4A1-202ENST00000467182 EFCAB13Q8IY85 973 aa14.08□□□□□ -0.16
COL4A1-202ENST00000467182 TAS1R2Q8TE23 839 aa14.08□□□□□ -0.16
COL4A1-202ENST00000467182 RPF1Q9H9Y2 349 aaKnown RBP14.08□□□□□ -0.16
COL4A1-202ENST00000467182 ST3GAL5Q9UNP4 418 aa14.08□□□□□ -0.16
COL4A1-202ENST00000467182 PIN4Q9Y237 131 aaKnown RBP14.08□□□□□ -0.16
COL4A1-202ENST00000467182 NOD1Q9Y239 953 aa14.08□□□□□ -0.16
COL4A1-202ENST00000467182 LUC7L2Q9Y383 392 aaKnown RBP14.08□□□□□ -0.16
COL4A1-202ENST00000467182 FHOD1Q9Y613 1164 aa14.08□□□□□ -0.16
COL4A1-202ENST00000467182 MROH7Q68CQ1 1323 aa14.08□□□□□ -0.16
COL4A1-202ENST00000467182 CITO14578 2027 aa14.07□□□□□ -0.16
COL4A1-202ENST00000467182 LACTBL1A8MY62 500 aa14.07□□□□□ -0.16
COL4A1-202ENST00000467182 IL18RAPO95256 599 aa14.07□□□□□ -0.16
COL4A1-202ENST00000467182 TPM1P09493 284 aa14.07□□□□□ -0.16
COL4A1-202ENST00000467182 UCHL3P15374 230 aa14.07□□□□□ -0.16
COL4A1-202ENST00000467182 HNRNPH3P31942 346 aaKnown RBP14.07□□□□□ -0.16
COL4A1-202ENST00000467182 GJA8P48165 433 aa14.07□□□□□ -0.16
COL4A1-202ENST00000467182 JAM2P57087 298 aa14.07□□□□□ -0.16
COL4A1-202ENST00000467182 POLR2FP61218 127 aaKnown RBP14.07□□□□□ -0.16
COL4A1-202ENST00000467182 NCBP1Q09161 790 aaKnown RBP14.07□□□□□ -0.16
COL4A1-202ENST00000467182 DSC3Q14574 896 aa14.07□□□□□ -0.16
COL4A1-202ENST00000467182 SURF1Q15526 300 aa14.07□□□□□ -0.16
COL4A1-202ENST00000467182 MEA1Q16626 185 aa14.07□□□□□ -0.16
COL4A1-202ENST00000467182 IQCEQ6IPM2 695 aa14.07□□□□□ -0.16
COL4A1-202ENST00000467182 PHLDB3Q6NSJ2 640 aa14.07□□□□□ -0.16
COL4A1-202ENST00000467182 ARHGEF19Q8IW93 802 aa14.07□□□□□ -0.16
COL4A1-202ENST00000467182 SMG8Q8ND04 991 aaKnown RBP14.07□□□□□ -0.16
COL4A1-202ENST00000467182 OR8K1Q8NGG5 319 aa14.07□□□□□ -0.16
COL4A1-202ENST00000467182 DIS3LQ8TF46 1054 aaKnown RBP14.07□□□□□ -0.16
COL4A1-202ENST00000467182 FNBP1Q96RU3 617 aa14.07□□□□□ -0.16
COL4A1-202ENST00000467182 ADPGKQ9BRR6 497 aa14.07□□□□□ -0.16
COL4A1-202ENST00000467182 GPR88Q9GZN0 384 aa14.07□□□□□ -0.16
COL4A1-202ENST00000467182 CXCL16Q9H2A7 254 aa14.07□□□□□ -0.16
COL4A1-202ENST00000467182 SQORQ9Y6N5 450 aa14.07□□□□□ -0.16
COL4A1-202ENST00000467182 TANC1Q9C0D5 1861 aa14.07□□□□□ -0.16
COL4A1-202ENST00000467182 TRIP11Q15643 1979 aa14.06□□□□□ -0.16
COL4A1-202ENST00000467182 LRRC53A6NM62 1247 aa14.06□□□□□ -0.16
COL4A1-202ENST00000467182 MGEA5O60502 916 aa14.06□□□□□ -0.16
COL4A1-202ENST00000467182 TFRCP02786 760 aaKnown RBP14.06□□□□□ -0.16
COL4A1-202ENST00000467182 GHRP10912 638 aa14.06□□□□□ -0.16
COL4A1-202ENST00000467182 SKILP12757 684 aa14.06□□□□□ -0.16
COL4A1-202ENST00000467182 TNNI1P19237 187 aa14.06□□□□□ -0.16
COL4A1-202ENST00000467182 CD52P31358 61 aa14.06□□□□□ -0.16
COL4A1-202ENST00000467182 ALKAL1Q6UXT8 129 aa14.06□□□□□ -0.16
COL4A1-202ENST00000467182 SLC39A5Q6ZMH5 540 aa14.06□□□□□ -0.16
COL4A1-202ENST00000467182 ZSCAN30Q86W11 494 aa14.06□□□□□ -0.16
COL4A1-202ENST00000467182 FBXL13Q8NEE6 735 aa14.06□□□□□ -0.16
COL4A1-202ENST00000467182 CCDC112Q8NEF3 446 aa14.06□□□□□ -0.16
COL4A1-202ENST00000467182 CXorf38Q8TB03 319 aa14.06□□□□□ -0.16
COL4A1-202ENST00000467182 BAG1Q99933 345 aaPredicted RBP14.06□□□□□ -0.16
COL4A1-202ENST00000467182 NXF3Q9H4D5 531 aaKnown RBP14.06□□□□□ -0.16
COL4A1-202ENST00000467182 ASB7Q9H672 318 aa14.06□□□□□ -0.16
COL4A1-202ENST00000467182 NLRC4Q9NPP4 1024 aa14.06□□□□□ -0.16
COL4A1-202ENST00000467182 CHST12Q9NRB3 414 aa14.06□□□□□ -0.16
COL4A1-202ENST00000467182 RAB20Q9NX57 234 aa14.06□□□□□ -0.16
COL4A1-202ENST00000467182 SNTG2Q9NY99 539 aa14.06□□□□□ -0.16
COL4A1-202ENST00000467182 PADI3Q9ULW8 664 aa14.06□□□□□ -0.16
COL4A1-202ENST00000467182 HES2Q9Y543 173 aa14.06□□□□□ -0.16
COL4A1-202ENST00000467182 GPR182O15218 404 aa14.05□□□□□ -0.16
COL4A1-202ENST00000467182 HLA-DRAP01903 254 aa14.05□□□□□ -0.16
COL4A1-202ENST00000467182 NFICP08651 508 aa14.05□□□□□ -0.16
COL4A1-202ENST00000467182 AP3M2P53677 418 aa14.05□□□□□ -0.16
COL4A1-202ENST00000467182 CETN1Q12798 172 aa14.05□□□□□ -0.16
COL4A1-202ENST00000467182 GPNMBQ14956 572 aa14.05□□□□□ -0.16
COL4A1-202ENST00000467182 XKR4Q5GH76 650 aa14.05□□□□□ -0.16
COL4A1-202ENST00000467182 C1orf53Q5VUE5 145 aa14.05□□□□□ -0.16
COL4A1-202ENST00000467182 JADE1Q6IE81 842 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms