RNA–Protein interactions for RNA: ENST00000467062.5

SNAPC3-205, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-205ENST00000467062 TXLNGQ9NUQ3 528 aa19.3■□□□□ 0.68
SNAPC3-205ENST00000467062 NPM3O75607 178 aaKnown RBP19.29■□□□□ 0.68
SNAPC3-205ENST00000467062 SCNN1BP51168 640 aa19.29■□□□□ 0.68
SNAPC3-205ENST00000467062 MUM1Q2TAK8 710 aa19.29■□□□□ 0.68
SNAPC3-205ENST00000467062 LDHDQ86WU2 507 aa19.29■□□□□ 0.68
SNAPC3-205ENST00000467062 ARHGAP18Q8N392 663 aa19.29■□□□□ 0.68
SNAPC3-205ENST00000467062 PARVGQ9HBI0 331 aa19.29■□□□□ 0.68
SNAPC3-205ENST00000467062 ETNK1Q9HBU6 452 aa19.29■□□□□ 0.68
SNAPC3-205ENST00000467062 TMCO1Q9UM00 188 aa19.29■□□□□ 0.68
SNAPC3-205ENST00000467062 ZNF232Q9UNY5 417 aa19.29■□□□□ 0.68
SNAPC3-205ENST00000467062 TRIM33Q9UPN9 1127 aa19.29■□□□□ 0.68
SNAPC3-205ENST00000467062 TLDC2A0PJX2 215 aa19.29■□□□□ 0.68
SNAPC3-205ENST00000467062 RPL13P26373 211 aaKnown RBP19.29■□□□□ 0.68
SNAPC3-205ENST00000467062 DENND2CQ68D51 928 aa19.29■□□□□ 0.68
SNAPC3-205ENST00000467062 FAM178BQ8IXR5 827 aa19.29■□□□□ 0.68
SNAPC3-205ENST00000467062 LARGE2Q8N3Y3 721 aa19.29■□□□□ 0.68
SNAPC3-205ENST00000467062 AP1M1Q9BXS5 423 aa19.29■□□□□ 0.68
SNAPC3-205ENST00000467062 TXLNGYQ9BZA5 131 aa19.29■□□□□ 0.68
SNAPC3-205ENST00000467062 DDX47Q9H0S4 455 aaKnown RBP19.29■□□□□ 0.68
SNAPC3-205ENST00000467062 PCIF1Q9H4Z3 704 aa19.29■□□□□ 0.68
SNAPC3-205ENST00000467062 ATP5HO75947 161 aa19.28■□□□□ 0.68
SNAPC3-205ENST00000467062 UNC5CO95185 931 aa19.28■□□□□ 0.68
SNAPC3-205ENST00000467062 TAOK1Q7L7X3 1001 aa19.28■□□□□ 0.68
SNAPC3-205ENST00000467062 OGFOD1Q8N543 542 aa19.28■□□□□ 0.68
SNAPC3-205ENST00000467062 FITM2Q8N6M3 262 aa19.28■□□□□ 0.68
SNAPC3-205ENST00000467062 IL31RAQ8NI17 732 aa19.28■□□□□ 0.68
SNAPC3-205ENST00000467062 U2AF1L4Q8WU68 220 aaKnown RBP19.28■□□□□ 0.68
SNAPC3-205ENST00000467062 FAM136AQ96C01 138 aa19.28■□□□□ 0.68
SNAPC3-205ENST00000467062 NUDCD1Q96RS6 583 aa19.28■□□□□ 0.68
SNAPC3-205ENST00000467062 FIZ1Q96SL8 496 aa19.28■□□□□ 0.68
SNAPC3-205ENST00000467062 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.28■□□□□ 0.682e-8■■□□□ 12.9
SNAPC3-205ENST00000467062 LXNQ9BS40 222 aa19.28■□□□□ 0.68
SNAPC3-205ENST00000467062 WDR11Q9BZH6 1224 aa19.28■□□□□ 0.68
SNAPC3-205ENST00000467062 AZI2Q9H6S1 392 aa19.28■□□□□ 0.68
SNAPC3-205ENST00000467062 IPO5O00410 1097 aaKnown RBP19.28■□□□□ 0.68
SNAPC3-205ENST00000467062 KRIT1O00522 736 aa19.28■□□□□ 0.68
SNAPC3-205ENST00000467062 ECEL1O95672 775 aa19.28■□□□□ 0.68
SNAPC3-205ENST00000467062 RSBN1LQ6PCB5 846 aaPredicted RBP19.28■□□□□ 0.68
SNAPC3-205ENST00000467062 ARHGAP27Q6ZUM4 889 aa19.28■□□□□ 0.68
SNAPC3-205ENST00000467062 AGGF1Q8N302 714 aaeCLIP19.28■□□□□ 0.68
SNAPC3-205ENST00000467062 NEK9Q8TD19 979 aa19.28■□□□□ 0.68
SNAPC3-205ENST00000467062 SH3TC2Q8TF17 1288 aa19.28■□□□□ 0.68
SNAPC3-205ENST00000467062 COL20A1Q9P218 1284 aa19.28■□□□□ 0.68
SNAPC3-205ENST00000467062 HERC5Q9UII4 1024 aaKnown RBP19.28■□□□□ 0.68
SNAPC3-205ENST00000467062 LRCH1Q9Y2L9 728 aa19.28■□□□□ 0.68
SNAPC3-205ENST00000467062 DDX3XO00571 662 aaKnown RBP eCLIP19.27■□□□□ 0.68
SNAPC3-205ENST00000467062 NFIBO00712 420 aa19.27■□□□□ 0.68
SNAPC3-205ENST00000467062 ITGB5P18084 799 aa19.27■□□□□ 0.68
SNAPC3-205ENST00000467062 HOXA7P31268 230 aaPredicted RBP19.27■□□□□ 0.68
SNAPC3-205ENST00000467062 PTDSS1P48651 473 aaKnown RBP19.27■□□□□ 0.68
SNAPC3-205ENST00000467062 PRELPP51888 382 aa19.27■□□□□ 0.68
SNAPC3-205ENST00000467062 CNGA2Q16280 664 aa19.27■□□□□ 0.68
SNAPC3-205ENST00000467062 ARHGAP44Q17R89 818 aa19.27■□□□□ 0.68
SNAPC3-205ENST00000467062 ZNF720Q7Z2F6 126 aa19.27■□□□□ 0.68
SNAPC3-205ENST00000467062 GLYCTKQ8IVS8 523 aa19.27■□□□□ 0.68
SNAPC3-205ENST00000467062 ZSWIM2Q8NEG5 633 aa19.27■□□□□ 0.68
SNAPC3-205ENST00000467062 SLC5A5Q92911 643 aa19.27■□□□□ 0.68
SNAPC3-205ENST00000467062 GBP5Q96PP8 586 aa19.27■□□□□ 0.68
SNAPC3-205ENST00000467062 PABPC3Q9H361 631 aaKnown RBP19.27■□□□□ 0.68
SNAPC3-205ENST00000467062 OLFML3Q9NRN5 406 aa19.27■□□□□ 0.68
SNAPC3-205ENST00000467062 AMACRQ9UHK6 382 aa19.27■□□□□ 0.68
SNAPC3-205ENST00000467062 ABCB4P21439 1286 aa19.27■□□□□ 0.67
SNAPC3-205ENST00000467062 CCDC15Q0P6D6 951 aa19.27■□□□□ 0.67
SNAPC3-205ENST00000467062 BMT2Q1RMZ1 405 aa19.27■□□□□ 0.67
SNAPC3-205ENST00000467062 TRIM42Q8IWZ5 723 aa19.27■□□□□ 0.67
SNAPC3-205ENST00000467062 SLC17A8Q8NDX2 589 aa19.27■□□□□ 0.67
SNAPC3-205ENST00000467062 OSGEPQ9NPF4 335 aa19.27■□□□□ 0.67
SNAPC3-205ENST00000467062 FGFR1OP2Q9NVK5 253 aa19.27■□□□□ 0.67
SNAPC3-205ENST00000467062 CNTNAP1P78357 1384 aa19.27■□□□□ 0.67
SNAPC3-205ENST00000467062 LMNAP02545 664 aaKnown RBP19.26■□□□□ 0.67
SNAPC3-205ENST00000467062 GSTT1P30711 240 aa19.26■□□□□ 0.67
SNAPC3-205ENST00000467062 EN1Q05925 392 aaPredicted RBP19.26■□□□□ 0.67
SNAPC3-205ENST00000467062 CFAP61Q8NHU2 1237 aa19.26■□□□□ 0.67
SNAPC3-205ENST00000467062 FAM151AQ8WW52 585 aa19.26■□□□□ 0.67
SNAPC3-205ENST00000467062 TIPINQ9BVW5 301 aa19.26■□□□□ 0.67
SNAPC3-205ENST00000467062 GALNT8Q9NY28 637 aa19.26■□□□□ 0.67
SNAPC3-205ENST00000467062 SLC4A7Q9Y6M7 1214 aa19.26■□□□□ 0.67
SNAPC3-205ENST00000467062 VIL1P09327 827 aaKnown RBP19.26■□□□□ 0.67
SNAPC3-205ENST00000467062 SKIP12755 728 aa19.26■□□□□ 0.67
SNAPC3-205ENST00000467062 PSMC2P35998 433 aaKnown RBP19.26■□□□□ 0.67
SNAPC3-205ENST00000467062 PMS2P54278 862 aa19.26■□□□□ 0.67
SNAPC3-205ENST00000467062 DLG4P78352 724 aa19.26■□□□□ 0.67
SNAPC3-205ENST00000467062 IFI35P80217 286 aaPredicted RBP19.26■□□□□ 0.67
SNAPC3-205ENST00000467062 PPP2R5CQ13362 524 aa19.26■□□□□ 0.67
SNAPC3-205ENST00000467062 WASHC2DQ5SRD0 308 aa19.26■□□□□ 0.67
SNAPC3-205ENST00000467062 DPH5Q9H2P9 285 aa19.26■□□□□ 0.67
SNAPC3-205ENST00000467062 RANBP17Q9H2T7 1088 aaKnown RBP19.26■□□□□ 0.67
SNAPC3-205ENST00000467062 METTL14Q9HCE5 456 aaKnown RBP19.26■□□□□ 0.67
SNAPC3-205ENST00000467062 SEPT11Q9NVA2 429 aaKnown RBP19.26■□□□□ 0.67
SNAPC3-205ENST00000467062 PDP2Q9P2J9 529 aa19.26■□□□□ 0.67
SNAPC3-205ENST00000467062 NOC2LQ9Y3T9 749 aaKnown RBP19.26■□□□□ 0.67
SNAPC3-205ENST00000467062 TCP11X1B4DZS4 312 aa19.25■□□□□ 0.67
SNAPC3-205ENST00000467062 NVLO15381 856 aaKnown RBP19.25■□□□□ 0.67
SNAPC3-205ENST00000467062 SH3BGRP55822 239 aaPredicted RBP19.25■□□□□ 0.67
SNAPC3-205ENST00000467062 FOXB2Q5VYV0 432 aa19.25■□□□□ 0.67
SNAPC3-205ENST00000467062 CHURC1Q8WUH1 139 aa19.25■□□□□ 0.67
SNAPC3-205ENST00000467062 PTPRN2Q92932 1015 aa19.25■□□□□ 0.67
SNAPC3-205ENST00000467062 UTP4Q969X6 686 aaKnown RBP19.25■□□□□ 0.67
SNAPC3-205ENST00000467062 DDX23Q9BUQ8 820 aaKnown RBP19.25■□□□□ 0.67
SNAPC3-205ENST00000467062 AGPAT3Q9NRZ7 376 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms