RNA–Protein interactions for RNA: ENST00000466742.5

ABCF3-206, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 2,331 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-206ENST00000466742 CHURC1Q8WUH1 139 aa16.54■□□□□ 0.24
ABCF3-206ENST00000466742 WDR60Q8WVS4 1066 aa16.54■□□□□ 0.24
ABCF3-206ENST00000466742 BAP1Q92560 729 aa16.54■□□□□ 0.24
ABCF3-206ENST00000466742 RNF25Q96BH1 459 aaPredicted RBP16.54■□□□□ 0.24
ABCF3-206ENST00000466742 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.54■□□□□ 0.244e-8■□□□□ 10.1
ABCF3-206ENST00000466742 GLIS2Q9BZE0 524 aaPredicted RBP16.54■□□□□ 0.24
ABCF3-206ENST00000466742 ETNK2Q9NVF9 386 aa16.54■□□□□ 0.24
ABCF3-206ENST00000466742 TMEM98Q9Y2Y6 226 aa16.54■□□□□ 0.24
ABCF3-206ENST00000466742 PAX3P23760 479 aa16.53■□□□□ 0.24
ABCF3-206ENST00000466742 MAP7Q14244 749 aa16.53■□□□□ 0.24
ABCF3-206ENST00000466742 RRAGAQ7L523 313 aa16.53■□□□□ 0.24
ABCF3-206ENST00000466742 GIMAP8Q8ND71 665 aaPredicted RBP16.53■□□□□ 0.24
ABCF3-206ENST00000466742 TBC1D10AQ9BXI6 508 aa16.53■□□□□ 0.24
ABCF3-206ENST00000466742 ZNF341Q9BYN7 854 aa16.53■□□□□ 0.24
ABCF3-206ENST00000466742 EDEM3Q9BZQ6 932 aa16.53■□□□□ 0.24
ABCF3-206ENST00000466742 IL1RAPL1Q9NZN1 696 aa16.53■□□□□ 0.24
ABCF3-206ENST00000466742 AMACRQ9UHK6 382 aa16.53■□□□□ 0.24
ABCF3-206ENST00000466742 ZNF112Q9UJU3 913 aa16.53■□□□□ 0.24
ABCF3-206ENST00000466742 TRAFD1O14545 582 aaPredicted RBP16.53■□□□□ 0.24
ABCF3-206ENST00000466742 ENTPD5O75356 428 aa16.53■□□□□ 0.24
ABCF3-206ENST00000466742 LYNP07948 512 aa16.53■□□□□ 0.24
ABCF3-206ENST00000466742 ZBTB48P10074 688 aaPredicted RBP16.53■□□□□ 0.24
ABCF3-206ENST00000466742 YBX3P16989 372 aaKnown RBP eCLIP16.53■□□□□ 0.24
ABCF3-206ENST00000466742 CCNFP41002 786 aa16.53■□□□□ 0.24
ABCF3-206ENST00000466742 USP11P51784 963 aa16.53■□□□□ 0.24
ABCF3-206ENST00000466742 HIRAP54198 1017 aaPredicted RBP16.53■□□□□ 0.24
ABCF3-206ENST00000466742 GIT2Q14161 759 aa16.53■□□□□ 0.24
ABCF3-206ENST00000466742 UBE2SQ16763 222 aa16.53■□□□□ 0.24
ABCF3-206ENST00000466742 FAM160B2Q86V87 743 aa16.53■□□□□ 0.24
ABCF3-206ENST00000466742 NRG4Q8WWG1 115 aa16.53■□□□□ 0.24
ABCF3-206ENST00000466742 CKAP2Q8WWK9 683 aa16.53■□□□□ 0.24
ABCF3-206ENST00000466742 OLFM3Q96PB7 478 aa16.53■□□□□ 0.24
ABCF3-206ENST00000466742 AP1M1Q9BXS5 423 aa16.53■□□□□ 0.24
ABCF3-206ENST00000466742 OXCT2Q9BYC2 517 aaPredicted RBP16.53■□□□□ 0.24
ABCF3-206ENST00000466742 GGA3Q9NZ52 723 aa16.53■□□□□ 0.24
ABCF3-206ENST00000466742 RNF181Q9P0P0 153 aa16.53■□□□□ 0.24
ABCF3-206ENST00000466742 CHMP2BQ9UQN3 213 aa16.53■□□□□ 0.24
ABCF3-206ENST00000466742 A0A0J9YVX5 310 aa16.52■□□□□ 0.24
ABCF3-206ENST00000466742 TTI1O43156 1089 aa16.52■□□□□ 0.24
ABCF3-206ENST00000466742 RHOBTB3O94955 611 aa16.52■□□□□ 0.24
ABCF3-206ENST00000466742 OR52Z1P0C646 297 aa16.52■□□□□ 0.24
ABCF3-206ENST00000466742 CCNE1P24864 410 aa16.52■□□□□ 0.24
ABCF3-206ENST00000466742 USH1GQ495M9 461 aa16.52■□□□□ 0.24
ABCF3-206ENST00000466742 PDXDC1Q6P996 788 aa16.52■□□□□ 0.24
ABCF3-206ENST00000466742 GRAMD1AQ96CP6 724 aa16.52■□□□□ 0.24
ABCF3-206ENST00000466742 SLC7A6OSQ96CW6 309 aaPredicted RBP16.52■□□□□ 0.24
ABCF3-206ENST00000466742 CLMNQ96JQ2 1002 aa16.52■□□□□ 0.24
ABCF3-206ENST00000466742 KIAA1683Q9H0B3 1180 aa16.52■□□□□ 0.24
ABCF3-206ENST00000466742 TLE6Q9H808 572 aa16.52■□□□□ 0.24
ABCF3-206ENST00000466742 DAAM1Q9Y4D1 1078 aa16.52■□□□□ 0.24
ABCF3-206ENST00000466742 DICER1Q9UPY3 1922 aaKnown RBP16.52■□□□□ 0.24
ABCF3-206ENST00000466742 BICDL2A1A5D9 508 aa16.52■□□□□ 0.23
ABCF3-206ENST00000466742 KRIT1O00522 736 aa16.52■□□□□ 0.23
ABCF3-206ENST00000466742 EDIL3O43854 480 aa16.52■□□□□ 0.23
ABCF3-206ENST00000466742 KLRC4O43908 158 aa16.52■□□□□ 0.23
ABCF3-206ENST00000466742 RTP1P59025 263 aa16.52■□□□□ 0.23
ABCF3-206ENST00000466742 HPCAP84074 193 aa16.52■□□□□ 0.23
ABCF3-206ENST00000466742 POU5F1Q01860 360 aaKnown RBP16.52■□□□□ 0.23
ABCF3-206ENST00000466742 CCDC6Q16204 474 aa16.52■□□□□ 0.23
ABCF3-206ENST00000466742 MFSD4BQ5TF39 518 aa16.52■□□□□ 0.23
ABCF3-206ENST00000466742 CGB2Q6NT52 195 aa16.52■□□□□ 0.23
ABCF3-206ENST00000466742 RSPH1Q8WYR4 309 aa16.52■□□□□ 0.23
ABCF3-206ENST00000466742 LPAR1Q92633 364 aa16.52■□□□□ 0.23
ABCF3-206ENST00000466742 KCNN1Q92952 543 aa16.52■□□□□ 0.23
ABCF3-206ENST00000466742 CATSPER2Q96P56 530 aa16.52■□□□□ 0.23
ABCF3-206ENST00000466742 SMC6Q96SB8 1091 aa16.52■□□□□ 0.23
ABCF3-206ENST00000466742 MYLK2Q9H1R3 596 aa16.52■□□□□ 0.23
ABCF3-206ENST00000466742 ZDHHC18Q9NUE0 388 aa16.52■□□□□ 0.23
ABCF3-206ENST00000466742 DDX25Q9UHL0 483 aaKnown RBP16.52■□□□□ 0.23
ABCF3-206ENST00000466742 FEM1BQ9UK73 627 aa16.52■□□□□ 0.23
ABCF3-206ENST00000466742 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.51■□□□□ 0.23
ABCF3-206ENST00000466742 BTNL10A8MVZ5 291 aa16.51■□□□□ 0.23
ABCF3-206ENST00000466742 DDNO94850 711 aaPredicted RBP16.51■□□□□ 0.23
ABCF3-206ENST00000466742 CDK7P50613 346 aa16.51■□□□□ 0.23
ABCF3-206ENST00000466742 RASSF2P50749 326 aa16.51■□□□□ 0.23
ABCF3-206ENST00000466742 AP1B1Q10567 949 aa16.51■□□□□ 0.23
ABCF3-206ENST00000466742 AP3B2Q13367 1082 aa16.51■□□□□ 0.23
ABCF3-206ENST00000466742 P3H1Q32P28 736 aa16.51■□□□□ 0.23
ABCF3-206ENST00000466742 KLC3Q6P597 504 aa16.51■□□□□ 0.23
ABCF3-206ENST00000466742 CCDC84Q86UT8 332 aaPredicted RBP16.51■□□□□ 0.23
ABCF3-206ENST00000466742 VSIG1Q86XK7 387 aa16.51■□□□□ 0.23
ABCF3-206ENST00000466742 RASGEF1CQ8N431 466 aa16.51■□□□□ 0.23
ABCF3-206ENST00000466742 SPIRE2Q8WWL2 714 aa16.51■□□□□ 0.23
ABCF3-206ENST00000466742 P2RX5Q93086 422 aa16.51■□□□□ 0.23
ABCF3-206ENST00000466742 FAM207AQ9NSI2 230 aaPredicted RBP16.51■□□□□ 0.23
ABCF3-206ENST00000466742 NOC2LQ9Y3T9 749 aaKnown RBP16.51■□□□□ 0.23
ABCF3-206ENST00000466742 PITPNM2Q9BZ72 1349 aa16.51■□□□□ 0.23
ABCF3-206ENST00000466742 MEIS2O14770 477 aa16.51■□□□□ 0.23
ABCF3-206ENST00000466742 HNRNPCP07910 306 aaKnown RBP eCLIP16.51■□□□□ 0.23
ABCF3-206ENST00000466742 BCRP11274 1271 aa16.51■□□□□ 0.23
ABCF3-206ENST00000466742 SNAP25P60880 206 aa16.51■□□□□ 0.23
ABCF3-206ENST00000466742 ZYXQ15942 572 aaKnown RBP16.51■□□□□ 0.23
ABCF3-206ENST00000466742 MFSD5Q6N075 450 aa16.51■□□□□ 0.23
ABCF3-206ENST00000466742 NAT14Q8WUY8 206 aa16.51■□□□□ 0.23
ABCF3-206ENST00000466742 AK8Q96MA6 479 aa16.51■□□□□ 0.23
ABCF3-206ENST00000466742 ADARB2Q9NS39 739 aaKnown RBP16.51■□□□□ 0.23
ABCF3-206ENST00000466742 ITGB1BP2Q9UKP3 347 aa16.51■□□□□ 0.23
ABCF3-206ENST00000466742 USP17L15C9J2P7 530 aa16.5■□□□□ 0.23
ABCF3-206ENST00000466742 BTBD19C9JJ37 291 aa16.5■□□□□ 0.23
ABCF3-206ENST00000466742 USP17L13C9JLJ4 530 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms