RNA–Protein interactions for RNA: ENST00000466438.1

HMGXB4-206, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-206ENST00000466438 SMOC1Q9H4F8 434 aa16.43■□□□□ 0.22
HMGXB4-206ENST00000466438 MINDY3Q9H8M7 445 aa16.43■□□□□ 0.22
HMGXB4-206ENST00000466438 VPS45Q9NRW7 570 aa16.43■□□□□ 0.22
HMGXB4-206ENST00000466438 COL4A3BPQ9Y5P4 624 aa16.43■□□□□ 0.22
HMGXB4-206ENST00000466438 SPAG17Q6Q759 2223 aa16.43■□□□□ 0.22
HMGXB4-206ENST00000466438 PRC1O43663 620 aa16.42■□□□□ 0.22
HMGXB4-206ENST00000466438 ZIC2O95409 532 aaPredicted RBP16.42■□□□□ 0.22
HMGXB4-206ENST00000466438 CCNE1P24864 410 aa16.42■□□□□ 0.22
HMGXB4-206ENST00000466438 GDI1P31150 447 aa16.42■□□□□ 0.22
HMGXB4-206ENST00000466438 MPLP40238 635 aa16.42■□□□□ 0.22
HMGXB4-206ENST00000466438 PTH1RQ03431 593 aa16.42■□□□□ 0.22
HMGXB4-206ENST00000466438 C1orf228Q6PIY5 440 aa16.42■□□□□ 0.22
HMGXB4-206ENST00000466438 LENG9Q96B70 501 aa16.42■□□□□ 0.22
HMGXB4-206ENST00000466438 MSANTD3Q96H12 275 aa16.42■□□□□ 0.22
HMGXB4-206ENST00000466438 TMEM87BQ96K49 555 aa16.42■□□□□ 0.22
HMGXB4-206ENST00000466438 EDEM2Q9BV94 578 aa16.42■□□□□ 0.22
HMGXB4-206ENST00000466438 EIF2AQ9BY44 585 aaKnown RBP16.42■□□□□ 0.22
HMGXB4-206ENST00000466438 UPF2Q9HAU5 1272 aaKnown RBP16.42■□□□□ 0.22
HMGXB4-206ENST00000466438 BARHL2Q9NY43 387 aa16.42■□□□□ 0.22
HMGXB4-206ENST00000466438 GIT1Q9Y2X7 761 aa16.42■□□□□ 0.22
HMGXB4-206ENST00000466438 HES2Q9Y543 173 aa16.42■□□□□ 0.22
HMGXB4-206ENST00000466438 SLC12A7Q9Y666 1083 aa16.42■□□□□ 0.22
HMGXB4-206ENST00000466438 ADAM12O43184 909 aa16.41■□□□□ 0.22
HMGXB4-206ENST00000466438 CHMP2AO43633 222 aa16.41■□□□□ 0.22
HMGXB4-206ENST00000466438 RPP40O75818 363 aaKnown RBP16.41■□□□□ 0.22
HMGXB4-206ENST00000466438 STBD1O95210 358 aa16.41■□□□□ 0.22
HMGXB4-206ENST00000466438 PSMC3P17980 439 aa16.41■□□□□ 0.22
HMGXB4-206ENST00000466438 LIFRP42702 1097 aa16.41■□□□□ 0.22
HMGXB4-206ENST00000466438 MLLT6P55198 1093 aaPredicted RBP16.41■□□□□ 0.22
HMGXB4-206ENST00000466438 RAB33AQ14088 237 aa16.41■□□□□ 0.22
HMGXB4-206ENST00000466438 HSP90AA2PQ14568 343 aaPredicted RBP16.41■□□□□ 0.22
HMGXB4-206ENST00000466438 FAM78AQ5JUQ0 283 aa16.41■□□□□ 0.22
HMGXB4-206ENST00000466438 SH3PXD2AQ5TCZ1 1133 aa16.41■□□□□ 0.22
HMGXB4-206ENST00000466438 DAB2IPQ5VWQ8 1189 aa16.41■□□□□ 0.22
HMGXB4-206ENST00000466438 PDXDC1Q6P996 788 aa16.41■□□□□ 0.22
HMGXB4-206ENST00000466438 Q6ZS52 159 aa16.41■□□□□ 0.22
HMGXB4-206ENST00000466438 KBTBD6Q86V97 674 aa16.41■□□□□ 0.22
HMGXB4-206ENST00000466438 RABGGTAQ92696 567 aa16.41■□□□□ 0.22
HMGXB4-206ENST00000466438 CCDC51Q96ER9 411 aa16.41■□□□□ 0.22
HMGXB4-206ENST00000466438 RBM12Q9NTZ6 932 aaKnown RBP16.41■□□□□ 0.22
HMGXB4-206ENST00000466438 GAS7O60861 476 aa16.4■□□□□ 0.22
HMGXB4-206ENST00000466438 CEACAM1P13688 526 aa16.4■□□□□ 0.22
HMGXB4-206ENST00000466438 CIITAP33076 1130 aa16.4■□□□□ 0.22
HMGXB4-206ENST00000466438 GRIK3Q13003 919 aa16.4■□□□□ 0.22
HMGXB4-206ENST00000466438 FAM171A1Q5VUB5 890 aa16.4■□□□□ 0.22
HMGXB4-206ENST00000466438 TCEAL6Q6IPX3 200 aa16.4■□□□□ 0.22
HMGXB4-206ENST00000466438 VITQ6UXI7 678 aa16.4■□□□□ 0.22
HMGXB4-206ENST00000466438 MICU3Q86XE3 530 aa16.4■□□□□ 0.22
HMGXB4-206ENST00000466438 CEP57Q86XR8 500 aa16.4■□□□□ 0.22
HMGXB4-206ENST00000466438 GSTCDQ8NEC7 633 aa16.4■□□□□ 0.22
HMGXB4-206ENST00000466438 RDM1Q8NG50 284 aa16.4■□□□□ 0.22
HMGXB4-206ENST00000466438 DEPDC1BQ8WUY9 529 aa16.4■□□□□ 0.22
HMGXB4-206ENST00000466438 TCEAL3Q969E4 200 aa16.4■□□□□ 0.22
HMGXB4-206ENST00000466438 ASB16Q96NS5 453 aa16.4■□□□□ 0.22
HMGXB4-206ENST00000466438 RIT2Q99578 217 aa16.4■□□□□ 0.22
HMGXB4-206ENST00000466438 UNC45AQ9H3U1 944 aa16.4■□□□□ 0.22
HMGXB4-206ENST00000466438 C2orf42Q9NWW7 574 aa16.4■□□□□ 0.22
HMGXB4-206ENST00000466438 NEUROG3Q9Y4Z2 214 aa16.4■□□□□ 0.22
HMGXB4-206ENST00000466438 C4orf47A7E2U8 309 aa16.39■□□□□ 0.21
HMGXB4-206ENST00000466438 ERLIN2O94905 339 aa16.39■□□□□ 0.21
HMGXB4-206ENST00000466438 AXLP30530 894 aa16.39■□□□□ 0.21
HMGXB4-206ENST00000466438 MCM5P33992 734 aa16.39■□□□□ 0.21
HMGXB4-206ENST00000466438 DGKKQ5KSL6 1271 aa16.39■□□□□ 0.21
HMGXB4-206ENST00000466438 NOTUMQ6P988 496 aa16.39■□□□□ 0.21
HMGXB4-206ENST00000466438 HACE1Q8IYU2 909 aa16.39■□□□□ 0.21
HMGXB4-206ENST00000466438 APOL6Q9BWW8 343 aa16.39■□□□□ 0.21
HMGXB4-206ENST00000466438 TEKT3Q9BXF9 490 aa16.39■□□□□ 0.21
HMGXB4-206ENST00000466438 SSUH2Q9Y2M2 353 aa16.39■□□□□ 0.21
HMGXB4-206ENST00000466438 LAMA5O15230 3695 aa16.39■□□□□ 0.21
HMGXB4-206ENST00000466438 ZMYM2Q9UBW7 1377 aa16.38■□□□□ 0.21
HMGXB4-206ENST00000466438 MAST4O15021 2626 aa16.38■□□□□ 0.21
HMGXB4-206ENST00000466438 IGSF10Q6WRI0 2623 aa16.38■□□□□ 0.21
HMGXB4-206ENST00000466438 HELZ2Q9BYK8 2649 aaKnown RBP16.38■□□□□ 0.21
HMGXB4-206ENST00000466438 CCDC163A0A0D9SF12 145 aa16.38■□□□□ 0.21
HMGXB4-206ENST00000466438 ARNTLO00327 626 aa16.38■□□□□ 0.21
HMGXB4-206ENST00000466438 NRG2O14511 850 aaPredicted RBP16.38■□□□□ 0.21
HMGXB4-206ENST00000466438 ZNF263O14978 683 aa16.38■□□□□ 0.21
HMGXB4-206ENST00000466438 MSH4O15457 936 aa16.38■□□□□ 0.21
HMGXB4-206ENST00000466438 AKAP3O75969 853 aa16.38■□□□□ 0.21
HMGXB4-206ENST00000466438 MICAL2O94851 1124 aa16.38■□□□□ 0.21
HMGXB4-206ENST00000466438 SRGAP2CP0DJJ0 459 aa16.38■□□□□ 0.21
HMGXB4-206ENST00000466438 CCDC192P0DO97 292 aa16.38■□□□□ 0.21
HMGXB4-206ENST00000466438 CSRP1P21291 193 aaKnown RBP16.38■□□□□ 0.21
HMGXB4-206ENST00000466438 HOXC13P31276 330 aa16.38■□□□□ 0.21
HMGXB4-206ENST00000466438 OR1D2P34982 312 aa16.38■□□□□ 0.21
HMGXB4-206ENST00000466438 PCBP1Q15365 356 aaKnown RBP eCLIP16.38■□□□□ 0.21
HMGXB4-206ENST00000466438 PRSS36Q5K4E3 855 aa16.38■□□□□ 0.21
HMGXB4-206ENST00000466438 HASPINQ8TF76 798 aa16.38■□□□□ 0.21
HMGXB4-206ENST00000466438 PSPC1Q8WXF1 523 aaKnown RBP16.38■□□□□ 0.21
HMGXB4-206ENST00000466438 ZC3H10Q96K80 434 aaKnown RBP16.38■□□□□ 0.21
HMGXB4-206ENST00000466438 PAAF1Q9BRP4 392 aa16.38■□□□□ 0.21
HMGXB4-206ENST00000466438 CSRNP2Q9H175 543 aa16.38■□□□□ 0.21
HMGXB4-206ENST00000466438 CACNG4Q9UBN1 327 aa16.38■□□□□ 0.21
HMGXB4-206ENST00000466438 V9GY48 417 aaPredicted RBP16.38■□□□□ 0.21
HMGXB4-206ENST00000466438 ADAMTS20P59510 1910 aa16.38■□□□□ 0.21
HMGXB4-206ENST00000466438 FREM2Q5SZK8 3169 aa16.37■□□□□ 0.21
HMGXB4-206ENST00000466438 DDX11L8A8MPP1 907 aa16.37■□□□□ 0.21
HMGXB4-206ENST00000466438 TSPAN1O60635 241 aa16.37■□□□□ 0.21
HMGXB4-206ENST00000466438 KIF4AO95239 1232 aa16.37■□□□□ 0.21
HMGXB4-206ENST00000466438 PTPN2P17706 415 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms