RNA–Protein interactions for RNA: ENST00000465950.5

SCAF11-205, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 5,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-205ENST00000465950 CRHR2Q13324 411 aa10.06□□□□□ -0.8
SCAF11-205ENST00000465950 NOMO2Q5JPE7 1267 aa10.06□□□□□ -0.8
SCAF11-205ENST00000465950 H2AFVQ71UI9 128 aa10.06□□□□□ -0.8
SCAF11-205ENST00000465950 CEP63Q96MT8 703 aa10.06□□□□□ -0.8
SCAF11-205ENST00000465950 H0YHG0 523 aa10.06□□□□□ -0.8
SCAF11-205ENST00000465950 CMA1P23946 247 aa10.06□□□□□ -0.8
SCAF11-205ENST00000465950 EEF1GP26641 437 aaKnown RBP10.06□□□□□ -0.8
SCAF11-205ENST00000465950 SYTL3Q4VX76 610 aa10.06□□□□□ -0.8
SCAF11-205ENST00000465950 KRT39Q6A163 491 aa10.06□□□□□ -0.8
SCAF11-205ENST00000465950 RETSATQ6NUM9 610 aa10.06□□□□□ -0.8
SCAF11-205ENST00000465950 SLC20A1Q8WUM9 679 aa10.06□□□□□ -0.8
SCAF11-205ENST00000465950 PPP1R13BQ96KQ4 1090 aa10.06□□□□□ -0.8
SCAF11-205ENST00000465950 TAAR1Q96RJ0 339 aa10.06□□□□□ -0.8
SCAF11-205ENST00000465950 UBR1Q8IWV7 1749 aa10.06□□□□□ -0.8
SCAF11-205ENST00000465950 F5H5T6 163 aa10.06□□□□□ -0.8
SCAF11-205ENST00000465950 H0Y626 953 aa10.06□□□□□ -0.8
SCAF11-205ENST00000465950 HSF2BPO75031 334 aa10.06□□□□□ -0.8
SCAF11-205ENST00000465950 ATICP31939 592 aa10.06□□□□□ -0.8
SCAF11-205ENST00000465950 GLUD2P49448 558 aa10.06□□□□□ -0.8
SCAF11-205ENST00000465950 CUL1Q13616 776 aa10.06□□□□□ -0.8
SCAF11-205ENST00000465950 DUSP28Q4G0W2 176 aa10.06□□□□□ -0.8
SCAF11-205ENST00000465950 SLC27A1Q6PCB7 646 aa10.06□□□□□ -0.8
SCAF11-205ENST00000465950 SMG7Q92540 1137 aaKnown RBP10.06□□□□□ -0.8
SCAF11-205ENST00000465950 ATP6V1E2Q96A05 226 aa10.06□□□□□ -0.8
SCAF11-205ENST00000465950 AGBL1Q96MI9 1066 aa10.06□□□□□ -0.8
SCAF11-205ENST00000465950 CGRRF1Q99675 332 aa10.06□□□□□ -0.8
SCAF11-205ENST00000465950 MYO1AQ9UBC5 1043 aa10.06□□□□□ -0.8
SCAF11-205ENST00000465950 POLR1AO95602 1720 aaPredicted RBP10.05□□□□□ -0.8
SCAF11-205ENST00000465950 OR6C75A6NL08 312 aa10.05□□□□□ -0.8
SCAF11-205ENST00000465950 MAN2B1O00754 1011 aa10.05□□□□□ -0.8
SCAF11-205ENST00000465950 PDHBP11177 359 aa10.05□□□□□ -0.8
SCAF11-205ENST00000465950 ALADP13716 330 aa10.05□□□□□ -0.8
SCAF11-205ENST00000465950 PLS3P13797 630 aa10.05□□□□□ -0.8
SCAF11-205ENST00000465950 DDIT3P35638 169 aa10.05□□□□□ -0.8
SCAF11-205ENST00000465950 PSEN1P49768 467 aa10.05□□□□□ -0.8
SCAF11-205ENST00000465950 DAB2P98082 770 aa10.05□□□□□ -0.8
SCAF11-205ENST00000465950 PTH1RQ03431 593 aa10.05□□□□□ -0.8
SCAF11-205ENST00000465950 CCNG2Q16589 344 aa10.05□□□□□ -0.8
SCAF11-205ENST00000465950 MICALCLQ6ZW33 695 aa10.05□□□□□ -0.8
SCAF11-205ENST00000465950 NPAS4Q8IUM7 802 aa10.05□□□□□ -0.8
SCAF11-205ENST00000465950 ENAHQ8N8S7 591 aaPredicted RBP10.05□□□□□ -0.8
SCAF11-205ENST00000465950 NFKBIZQ9BYH8 718 aa10.05□□□□□ -0.8
SCAF11-205ENST00000465950 FAM129AQ9BZQ8 928 aa10.05□□□□□ -0.8
SCAF11-205ENST00000465950 SLC16A4O15374 487 aa10.05□□□□□ -0.8
SCAF11-205ENST00000465950 MTSS1O43312 755 aa10.05□□□□□ -0.8
SCAF11-205ENST00000465950 RPIAP49247 311 aa10.05□□□□□ -0.8
SCAF11-205ENST00000465950 LEKR1Q6ZMV7 388 aa10.05□□□□□ -0.8
SCAF11-205ENST00000465950 UNC13DQ70J99 1090 aa10.05□□□□□ -0.8
SCAF11-205ENST00000465950 CHMP6Q96FZ7 201 aa10.05□□□□□ -0.8
SCAF11-205ENST00000465950 CDCA3Q99618 268 aaPredicted RBP10.05□□□□□ -0.8
SCAF11-205ENST00000465950 NT5C1AQ9BXI3 368 aa10.05□□□□□ -0.8
SCAF11-205ENST00000465950 VPS9D1Q9Y2B5 631 aa10.05□□□□□ -0.8
SCAF11-205ENST00000465950 BTBD18B2RXH4 712 aa10.05□□□□□ -0.8
SCAF11-205ENST00000465950 ARVCFO00192 962 aa10.05□□□□□ -0.8
SCAF11-205ENST00000465950 TREHO43280 583 aa10.05□□□□□ -0.8
SCAF11-205ENST00000465950 GADD45BO75293 160 aaPredicted RBP10.05□□□□□ -0.8
SCAF11-205ENST00000465950 RRM1P23921 792 aa10.05□□□□□ -0.8
SCAF11-205ENST00000465950 RPL9P32969 192 aaKnown RBP10.05□□□□□ -0.8
SCAF11-205ENST00000465950 MAGEA1P43355 309 aa10.05□□□□□ -0.8
SCAF11-205ENST00000465950 CRYBB1P53674 252 aaPredicted RBP10.05□□□□□ -0.8
SCAF11-205ENST00000465950 GRSF1Q12849 480 aaKnown RBP eCLIP10.05□□□□□ -0.8
SCAF11-205ENST00000465950 RPS6KA2Q15349 733 aa10.05□□□□□ -0.8
SCAF11-205ENST00000465950 KLC3Q6P597 504 aa10.05□□□□□ -0.8
SCAF11-205ENST00000465950 PANX2Q96RD6 677 aa10.05□□□□□ -0.8
SCAF11-205ENST00000465950 NELL2Q99435 816 aa10.05□□□□□ -0.8
SCAF11-205ENST00000465950 TCF25Q9BQ70 676 aa10.05□□□□□ -0.8
SCAF11-205ENST00000465950 ZWILCHQ9H900 591 aa10.05□□□□□ -0.8
SCAF11-205ENST00000465950 PLEKHA5Q9HAU0 1116 aa10.05□□□□□ -0.8
SCAF11-205ENST00000465950 SUSD2Q9UGT4 822 aa10.05□□□□□ -0.8
SCAF11-205ENST00000465950 DDX41Q9UJV9 622 aaKnown RBP10.05□□□□□ -0.8
SCAF11-205ENST00000465950 AOC2O75106 756 aa10.05□□□□□ -0.8
SCAF11-205ENST00000465950 CD58P19256 250 aa10.05□□□□□ -0.8
SCAF11-205ENST00000465950 NRLP54845 237 aa10.05□□□□□ -0.8
SCAF11-205ENST00000465950 ADCY1Q08828 1119 aa10.05□□□□□ -0.8
SCAF11-205ENST00000465950 PEX26Q7Z412 305 aa10.05□□□□□ -0.8
SCAF11-205ENST00000465950 FAM213AQ9BRX8 229 aa10.05□□□□□ -0.8
SCAF11-205ENST00000465950 FSD1LQ9BXM9 530 aa10.05□□□□□ -0.8
SCAF11-205ENST00000465950 CELF4Q9BZC1 486 aaKnown RBP10.05□□□□□ -0.8
SCAF11-205ENST00000465950 NDEL1Q9GZM8 345 aa10.05□□□□□ -0.8
SCAF11-205ENST00000465950 GIT1Q9Y2X7 761 aa10.05□□□□□ -0.8
SCAF11-205ENST00000465950 BRD1O95696 1058 aa10.04□□□□□ -0.8
SCAF11-205ENST00000465950 NLRP12P59046 1061 aa10.04□□□□□ -0.8
SCAF11-205ENST00000465950 CXCL17Q6UXB2 119 aa10.04□□□□□ -0.8
SCAF11-205ENST00000465950 SMIM5Q71RC9 77 aa10.04□□□□□ -0.8
SCAF11-205ENST00000465950 CHSY1Q86X52 802 aa10.04□□□□□ -0.8
SCAF11-205ENST00000465950 LRRC46Q96FV0 321 aa10.04□□□□□ -0.8
SCAF11-205ENST00000465950 KCTD5Q9NXV2 234 aa10.04□□□□□ -0.8
SCAF11-205ENST00000465950 UTP11Q9Y3A2 253 aaKnown RBP10.04□□□□□ -0.8
SCAF11-205ENST00000465950 ARHGAP6O43182 974 aa10.04□□□□□ -0.8
SCAF11-205ENST00000465950 ZNF202O95125 648 aa10.04□□□□□ -0.8
SCAF11-205ENST00000465950 CHEK2O96017 543 aa10.04□□□□□ -0.8
SCAF11-205ENST00000465950 RB1P06400 928 aa10.04□□□□□ -0.8
SCAF11-205ENST00000465950 ITGAXP20702 1163 aa10.04□□□□□ -0.8
SCAF11-205ENST00000465950 THOP1P52888 689 aa10.04□□□□□ -0.8
SCAF11-205ENST00000465950 TGM3Q08188 693 aa10.04□□□□□ -0.8
SCAF11-205ENST00000465950 CCDC144BQ3MJ40 725 aa10.04□□□□□ -0.8
SCAF11-205ENST00000465950 TMEM164Q5U3C3 297 aa10.04□□□□□ -0.8
SCAF11-205ENST00000465950 KLHL35Q6PF15 583 aa10.04□□□□□ -0.8
SCAF11-205ENST00000465950 DNAAF3Q8N9W5 541 aa10.04□□□□□ -0.8
SCAF11-205ENST00000465950 KCTD6Q8NC69 237 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms