RNA–Protein interactions for RNA: ENST00000465721.1

CNOT4-208, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 4

Gene CNOT4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-208ENST00000465721 MTSS1LQ765P7 747 aa13.06□□□□□ -0.32
CNOT4-208ENST00000465721 NPAS3Q8IXF0 933 aa13.06□□□□□ -0.32
CNOT4-208ENST00000465721 LNX1Q8TBB1 728 aaPredicted RBP13.06□□□□□ -0.32
CNOT4-208ENST00000465721 EIF2AK1Q9BQI3 630 aaKnown RBP13.06□□□□□ -0.32
CNOT4-208ENST00000465721 LARP6Q9BRS8 491 aaKnown RBP13.06□□□□□ -0.32
CNOT4-208ENST00000465721 TTPALQ9BTX7 342 aa13.06□□□□□ -0.32
CNOT4-208ENST00000465721 BCO2Q9BYV7 579 aa13.06□□□□□ -0.32
CNOT4-208ENST00000465721 OSBPL6Q9BZF3 934 aa13.06□□□□□ -0.32
CNOT4-208ENST00000465721 LTB4R2Q9NPC1 389 aa13.06□□□□□ -0.32
CNOT4-208ENST00000465721 GJB4Q9NTQ9 266 aa13.06□□□□□ -0.32
CNOT4-208ENST00000465721 SPATA6Q9NWH7 488 aaPredicted RBP13.06□□□□□ -0.32
CNOT4-208ENST00000465721 PCDHGA2Q9Y5H1 932 aa13.06□□□□□ -0.32
CNOT4-208ENST00000465721 STK36Q9NRP7 1315 aa13.06□□□□□ -0.32
CNOT4-208ENST00000465721 CEP295Q9C0D2 2601 aa13.05□□□□□ -0.32
CNOT4-208ENST00000465721 CCL16O15467 120 aa13.05□□□□□ -0.32
CNOT4-208ENST00000465721 LAMTOR5O43504 91 aa13.05□□□□□ -0.32
CNOT4-208ENST00000465721 TADA2AO75478 443 aa13.05□□□□□ -0.32
CNOT4-208ENST00000465721 RARRES1P49788 294 aa13.05□□□□□ -0.32
CNOT4-208ENST00000465721 STK3Q13188 491 aa13.05□□□□□ -0.32
CNOT4-208ENST00000465721 UBXN2BQ14CS0 331 aa13.05□□□□□ -0.32
CNOT4-208ENST00000465721 SLC44A4Q53GD3 710 aa13.05□□□□□ -0.32
CNOT4-208ENST00000465721 FAM171A1Q5VUB5 890 aa13.05□□□□□ -0.32
CNOT4-208ENST00000465721 PIK3AP1Q6ZUJ8 805 aa13.05□□□□□ -0.32
CNOT4-208ENST00000465721 TPH2Q8IWU9 490 aa13.05□□□□□ -0.32
CNOT4-208ENST00000465721 SLFN12Q8IYM2 578 aa13.05□□□□□ -0.32
CNOT4-208ENST00000465721 ZBTB44Q8NCP5 570 aa13.05□□□□□ -0.32
CNOT4-208ENST00000465721 SLC7A14Q8TBB6 771 aa13.05□□□□□ -0.32
CNOT4-208ENST00000465721 NELL1Q92832 810 aa13.05□□□□□ -0.32
CNOT4-208ENST00000465721 NAP1L4Q99733 375 aaKnown RBP13.05□□□□□ -0.32
CNOT4-208ENST00000465721 HSD17B14Q9BPX1 270 aa13.05□□□□□ -0.32
CNOT4-208ENST00000465721 KXD1Q9BQD3 176 aa13.05□□□□□ -0.32
CNOT4-208ENST00000465721 POLR3FQ9H1D9 316 aaPredicted RBP13.05□□□□□ -0.32
CNOT4-208ENST00000465721 CXCL16Q9H2A7 254 aa13.05□□□□□ -0.32
CNOT4-208ENST00000465721 RTN4Q9NQC3 1192 aaKnown RBP13.05□□□□□ -0.32
CNOT4-208ENST00000465721 ANKEF1Q9NU02 776 aa13.05□□□□□ -0.32
CNOT4-208ENST00000465721 HCFC1R1Q9NWW0 138 aa13.05□□□□□ -0.32
CNOT4-208ENST00000465721 PARP2Q9UGN5 583 aa13.05□□□□□ -0.32
CNOT4-208ENST00000465721 MYH11P35749 1972 aa13.05□□□□□ -0.32
CNOT4-208ENST00000465721 KIF26AQ9ULI4 1882 aaPredicted RBP13.04□□□□□ -0.32
CNOT4-208ENST00000465721 GREB1Q4ZG55 1949 aa13.04□□□□□ -0.32
CNOT4-208ENST00000465721 TTLL13PA6NNM8 815 aa13.04□□□□□ -0.32
CNOT4-208ENST00000465721 XYLBO75191 536 aa13.04□□□□□ -0.32
CNOT4-208ENST00000465721 CD72P21854 359 aa13.04□□□□□ -0.32
CNOT4-208ENST00000465721 TARSP26639 723 aaKnown RBP13.04□□□□□ -0.32
CNOT4-208ENST00000465721 MAGEA9P43362 315 aa13.04□□□□□ -0.32
CNOT4-208ENST00000465721 VARS2Q5ST30 1063 aaKnown RBP13.04□□□□□ -0.32
CNOT4-208ENST00000465721 CDCA2Q69YH5 1023 aaPredicted RBP13.04□□□□□ -0.32
CNOT4-208ENST00000465721 CPLX2Q6PUV4 134 aaKnown RBP13.04□□□□□ -0.32
CNOT4-208ENST00000465721 RSPO2Q6UXX9 243 aaPredicted RBP13.04□□□□□ -0.32
CNOT4-208ENST00000465721 CEP57Q86XR8 500 aa13.04□□□□□ -0.32
CNOT4-208ENST00000465721 CLDN23Q96B33 292 aa13.04□□□□□ -0.32
CNOT4-208ENST00000465721 EPC1Q9H2F5 836 aa13.04□□□□□ -0.32
CNOT4-208ENST00000465721 NCDNQ9UBB6 729 aa13.04□□□□□ -0.32
CNOT4-208ENST00000465721 SMG5Q9UPR3 1016 aaKnown RBP13.04□□□□□ -0.32
CNOT4-208ENST00000465721 SDK1Q7Z5N4 2213 aa13.04□□□□□ -0.32
CNOT4-208ENST00000465721 LAMA1P25391 3075 aa13.03□□□□□ -0.32
CNOT4-208ENST00000465721 SHISA7A6NL88 538 aa13.03□□□□□ -0.32
CNOT4-208ENST00000465721 FAM170BA6NMN3 283 aa13.03□□□□□ -0.32
CNOT4-208ENST00000465721 MARCH6O60337 910 aa13.03□□□□□ -0.32
CNOT4-208ENST00000465721 DTNBO60941 627 aa13.03□□□□□ -0.32
CNOT4-208ENST00000465721 LILRB5O75023 590 aa13.03□□□□□ -0.32
CNOT4-208ENST00000465721 RECQL4O94761 1208 aa13.03□□□□□ -0.32
CNOT4-208ENST00000465721 REC8O95072 547 aa13.03□□□□□ -0.32
CNOT4-208ENST00000465721 PFKPQ01813 784 aa13.03□□□□□ -0.32
CNOT4-208ENST00000465721 CSTF1Q05048 431 aaKnown RBP13.03□□□□□ -0.32
CNOT4-208ENST00000465721 SCRN1Q12765 414 aa13.03□□□□□ -0.32
CNOT4-208ENST00000465721 POTEHQ6S545 545 aa13.03□□□□□ -0.32
CNOT4-208ENST00000465721 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.03□□□□□ -0.32
CNOT4-208ENST00000465721 TPRG1Q6ZUI0 275 aa13.03□□□□□ -0.32
CNOT4-208ENST00000465721 TNFRSF25Q93038 417 aa13.03□□□□□ -0.32
CNOT4-208ENST00000465721 BORCS6Q96GS4 357 aa13.03□□□□□ -0.32
CNOT4-208ENST00000465721 PRIMPOLQ96LW4 560 aa13.03□□□□□ -0.32
CNOT4-208ENST00000465721 CNTNAP3BQ96NU0 1288 aa13.03□□□□□ -0.32
CNOT4-208ENST00000465721 CNTNAP3Q9BZ76 1288 aa13.03□□□□□ -0.32
CNOT4-208ENST00000465721 PDZD7Q9H5P4 517 aa13.03□□□□□ -0.32
CNOT4-208ENST00000465721 GPRC5CQ9NQ84 441 aa13.03□□□□□ -0.32
CNOT4-208ENST00000465721 PRMT8Q9NR22 394 aaPredicted RBP13.03□□□□□ -0.32
CNOT4-208ENST00000465721 PRMT7Q9NVM4 692 aaPredicted RBP13.03□□□□□ -0.32
CNOT4-208ENST00000465721 DNMT3BQ9UBC3 853 aaKnown RBP13.03□□□□□ -0.32
CNOT4-208ENST00000465721 MTRRQ9UBK8 725 aa13.03□□□□□ -0.32
CNOT4-208ENST00000465721 KCNH3Q9ULD8 1083 aa13.03□□□□□ -0.32
CNOT4-208ENST00000465721 POLIQ9UNA4 740 aa13.03□□□□□ -0.32
CNOT4-208ENST00000465721 CYP46A1Q9Y6A2 500 aa13.03□□□□□ -0.32
CNOT4-208ENST00000465721 NUP210Q8TEM1 1887 aaPredicted RBP13.03□□□□□ -0.32
CNOT4-208ENST00000465721 ANK1P16157 1881 aa13.02□□□□□ -0.32
CNOT4-208ENST00000465721 LRRIQ4A6NIV6 560 aa13.02□□□□□ -0.33
CNOT4-208ENST00000465721 USO1O60763 962 aaKnown RBP13.02□□□□□ -0.33
CNOT4-208ENST00000465721 EDN1P05305 212 aa13.02□□□□□ -0.33
CNOT4-208ENST00000465721 FGFR3P22607 806 aa13.02□□□□□ -0.33
CNOT4-208ENST00000465721 IGFBP6P24592 240 aaPredicted RBP13.02□□□□□ -0.33
CNOT4-208ENST00000465721 ELAVL2Q12926 359 aaKnown RBP13.02□□□□□ -0.33
CNOT4-208ENST00000465721 NR5A1Q13285 461 aa13.02□□□□□ -0.33
CNOT4-208ENST00000465721 FZD5Q13467 585 aa13.02□□□□□ -0.33
CNOT4-208ENST00000465721 RAB33AQ14088 237 aa13.02□□□□□ -0.33
CNOT4-208ENST00000465721 FAM187BQ17R55 369 aa13.02□□□□□ -0.33
CNOT4-208ENST00000465721 SLC5A9Q2M3M2 681 aa13.02□□□□□ -0.33
CNOT4-208ENST00000465721 PABPC1LQ4VXU2 614 aaKnown RBP13.02□□□□□ -0.33
CNOT4-208ENST00000465721 AXDND1Q5T1B0 1012 aaPredicted RBP13.02□□□□□ -0.33
CNOT4-208ENST00000465721 PDXDC1Q6P996 788 aa13.02□□□□□ -0.33
CNOT4-208ENST00000465721 PIGOQ8TEQ8 1089 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms