RNA–Protein interactions for RNA: ENST00000465399.5

ATG4B-214, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-214ENST00000465399 NUMBLQ9Y6R0 609 aa15.67■□□□□ 0.1
ATG4B-214ENST00000465399 FANCMQ8IYD8 2048 aa15.67■□□□□ 0.1
ATG4B-214ENST00000465399 MYH11P35749 1972 aa15.66■□□□□ 0.1
ATG4B-214ENST00000465399 ANHXE9PGG2 379 aa15.66■□□□□ 0.1
ATG4B-214ENST00000465399 C8AP07357 584 aa15.66■□□□□ 0.1
ATG4B-214ENST00000465399 HNRNPA1P09651 372 aaKnown RBP eCLIP15.66■□□□□ 0.1
ATG4B-214ENST00000465399 CYP11B2P19099 503 aa15.66■□□□□ 0.1
ATG4B-214ENST00000465399 MUTP22033 750 aa15.66■□□□□ 0.1
ATG4B-214ENST00000465399 GUCY1B3Q02153 619 aa15.66■□□□□ 0.1
ATG4B-214ENST00000465399 DCAF4L1Q3SXM0 396 aa15.66■□□□□ 0.1
ATG4B-214ENST00000465399 GRASPQ7Z6J2 395 aaPredicted RBP15.66■□□□□ 0.1
ATG4B-214ENST00000465399 LNX1Q8TBB1 728 aaPredicted RBP15.66■□□□□ 0.1
ATG4B-214ENST00000465399 BSNDQ8WZ55 320 aa15.66■□□□□ 0.1
ATG4B-214ENST00000465399 C8orf76Q96K31 380 aa15.66■□□□□ 0.1
ATG4B-214ENST00000465399 IFT74Q96LB3 600 aa15.66■□□□□ 0.1
ATG4B-214ENST00000465399 CCDC113Q9H0I3 377 aa15.66■□□□□ 0.1
ATG4B-214ENST00000465399 ARHGEF3Q9NR81 526 aa15.66■□□□□ 0.1
ATG4B-214ENST00000465399 XYLBO75191 536 aa15.65■□□□□ 0.1
ATG4B-214ENST00000465399 HOXA9P31269 272 aa15.65■□□□□ 0.1
ATG4B-214ENST00000465399 EFNA5P52803 228 aa15.65■□□□□ 0.1
ATG4B-214ENST00000465399 GNL2Q13823 731 aaKnown RBP15.65■□□□□ 0.1
ATG4B-214ENST00000465399 ZNF174Q15697 407 aa15.65■□□□□ 0.1
ATG4B-214ENST00000465399 NAB2Q15742 525 aa15.65■□□□□ 0.1
ATG4B-214ENST00000465399 PHLDB3Q6NSJ2 640 aa15.65■□□□□ 0.1
ATG4B-214ENST00000465399 DCLRE1AQ6PJP8 1040 aa15.65■□□□□ 0.1
ATG4B-214ENST00000465399 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.65■□□□□ 0.1
ATG4B-214ENST00000465399 APBB1IPQ7Z5R6 666 aaPredicted RBP15.65■□□□□ 0.1
ATG4B-214ENST00000465399 ADSSL1Q8N142 457 aa15.65■□□□□ 0.1
ATG4B-214ENST00000465399 SLC2A4RGQ9NR83 387 aa15.65■□□□□ 0.1
ATG4B-214ENST00000465399 CDH7Q9ULB5 785 aa15.65■□□□□ 0.1
ATG4B-214ENST00000465399 POLIQ9UNA4 740 aa15.65■□□□□ 0.1
ATG4B-214ENST00000465399 GDAQ9Y2T3 454 aa15.65■□□□□ 0.1
ATG4B-214ENST00000465399 RBM25P49756 843 aaKnown RBP15.64■□□□□ 0.09
ATG4B-214ENST00000465399 ST3GAL1Q11201 340 aa15.64■□□□□ 0.09
ATG4B-214ENST00000465399 PDCD11Q14690 1871 aaKnown RBP15.64■□□□□ 0.09
ATG4B-214ENST00000465399 SPECC1Q5M775 1068 aa15.64■□□□□ 0.09
ATG4B-214ENST00000465399 TTC38Q5R3I4 469 aa15.64■□□□□ 0.09
ATG4B-214ENST00000465399 AXDND1Q5T1B0 1012 aaPredicted RBP15.64■□□□□ 0.09
ATG4B-214ENST00000465399 ATF7IP2Q5U623 682 aa15.64■□□□□ 0.09
ATG4B-214ENST00000465399 MTSS1LQ765P7 747 aa15.64■□□□□ 0.09
ATG4B-214ENST00000465399 SLC7A14Q8TBB6 771 aa15.64■□□□□ 0.09
ATG4B-214ENST00000465399 KIFAP3Q92845 792 aa15.64■□□□□ 0.09
ATG4B-214ENST00000465399 NOTCH4Q99466 2003 aa15.64■□□□□ 0.09
ATG4B-214ENST00000465399 CXCL16Q9H2A7 254 aa15.64■□□□□ 0.09
ATG4B-214ENST00000465399 FOXP1Q9H334 677 aaPredicted RBP15.64■□□□□ 0.09
ATG4B-214ENST00000465399 USP20Q9Y2K6 914 aa15.64■□□□□ 0.09
ATG4B-214ENST00000465399 SIT1Q9Y3P8 196 aa15.64■□□□□ 0.09
ATG4B-214ENST00000465399 PATJQ8NI35 1801 aa15.64■□□□□ 0.09
ATG4B-214ENST00000465399 TMEM189-UBE2V1I3L0A0 370 aa15.63■□□□□ 0.09
ATG4B-214ENST00000465399 CCL16O15467 120 aa15.63■□□□□ 0.09
ATG4B-214ENST00000465399 TRAPPC3O43617 180 aa15.63■□□□□ 0.09
ATG4B-214ENST00000465399 B3GAT3O94766 335 aa15.63■□□□□ 0.09
ATG4B-214ENST00000465399 EDN1P05305 212 aa15.63■□□□□ 0.09
ATG4B-214ENST00000465399 DCNP07585 359 aaKnown RBP15.63■□□□□ 0.09
ATG4B-214ENST00000465399 OR1D2P34982 312 aa15.63■□□□□ 0.09
ATG4B-214ENST00000465399 CCT6AP40227 531 aaKnown RBP15.63■□□□□ 0.09
ATG4B-214ENST00000465399 NTHL1P78549 312 aa15.63■□□□□ 0.09
ATG4B-214ENST00000465399 FOXK2Q01167 660 aa15.63■□□□□ 0.09
ATG4B-214ENST00000465399 UVSSAQ2YD98 709 aa15.63■□□□□ 0.09
ATG4B-214ENST00000465399 GLRA4Q5JXX5 417 aa15.63■□□□□ 0.09
ATG4B-214ENST00000465399 EEF1DP3Q658K8 133 aa15.63■□□□□ 0.09
ATG4B-214ENST00000465399 PARM1Q6UWI2 310 aa15.63■□□□□ 0.09
ATG4B-214ENST00000465399 ST13P5Q8NFI4 369 aaPredicted RBP15.63■□□□□ 0.09
ATG4B-214ENST00000465399 KCNG4Q8TDN1 519 aa15.63■□□□□ 0.09
ATG4B-214ENST00000465399 FGF14Q92915 247 aa15.63■□□□□ 0.09
ATG4B-214ENST00000465399 SHDQ96IW2 340 aa15.63■□□□□ 0.09
ATG4B-214ENST00000465399 UROC1Q96N76 676 aa15.63■□□□□ 0.09
ATG4B-214ENST00000465399 KIFC3Q9BVG8 833 aa15.63■□□□□ 0.09
ATG4B-214ENST00000465399 BHMT2Q9H2M3 363 aa15.63■□□□□ 0.09
ATG4B-214ENST00000465399 SEMA4AQ9H3S1 761 aa15.63■□□□□ 0.09
ATG4B-214ENST00000465399 GVINP1Q7Z2Y8 2422 aa15.62■□□□□ 0.09
ATG4B-214ENST00000465399 ADAM12O43184 909 aa15.62■□□□□ 0.09
ATG4B-214ENST00000465399 POU2F2P09086 479 aa15.62■□□□□ 0.09
ATG4B-214ENST00000465399 FGFR3P22607 806 aa15.62■□□□□ 0.09
ATG4B-214ENST00000465399 TRAPPC10P48553 1259 aa15.62■□□□□ 0.09
ATG4B-214ENST00000465399 RAB33AQ14088 237 aa15.62■□□□□ 0.09
ATG4B-214ENST00000465399 ZC3H14Q6PJT7 736 aaKnown RBP15.62■□□□□ 0.09
ATG4B-214ENST00000465399 RTL10Q7L3V2 364 aa15.62■□□□□ 0.09
ATG4B-214ENST00000465399 CCDC83Q8IWF9 413 aa15.62■□□□□ 0.09
ATG4B-214ENST00000465399 PJA1Q8NG27 643 aa15.62■□□□□ 0.09
ATG4B-214ENST00000465399 FGF13Q92913 245 aa15.62■□□□□ 0.09
ATG4B-214ENST00000465399 PPP1R10Q96QC0 940 aaKnown RBP15.62■□□□□ 0.09
ATG4B-214ENST00000465399 LLPHQ9BRT6 129 aaKnown RBP15.62■□□□□ 0.09
ATG4B-214ENST00000465399 MTRRQ9UBK8 725 aa15.62■□□□□ 0.09
ATG4B-214ENST00000465399 LRWD1Q9UFC0 647 aa15.62■□□□□ 0.09
ATG4B-214ENST00000465399 NOL7Q9UMY1 257 aaKnown RBP15.62■□□□□ 0.09
ATG4B-214ENST00000465399 LIMCH1Q9UPQ0 1083 aa15.62■□□□□ 0.09
ATG4B-214ENST00000465399 STK24Q9Y6E0 443 aa15.62■□□□□ 0.09
ATG4B-214ENST00000465399 CDY1Q9Y6F8 540 aa15.62■□□□□ 0.09
ATG4B-214ENST00000465399 PHLPP2Q6ZVD8 1323 aa15.62■□□□□ 0.09
ATG4B-214ENST00000465399 K7ERI5 159 aa15.61■□□□□ 0.09
ATG4B-214ENST00000465399 LMNAP02545 664 aaKnown RBP15.61■□□□□ 0.09
ATG4B-214ENST00000465399 FXR2P51116 673 aaKnown RBP eCLIP15.61■□□□□ 0.09
ATG4B-214ENST00000465399 CLCNKBP51801 687 aa15.61■□□□□ 0.09
ATG4B-214ENST00000465399 YARSP54577 528 aaKnown RBP15.61■□□□□ 0.09
ATG4B-214ENST00000465399 GPC5P78333 572 aa15.61■□□□□ 0.09
ATG4B-214ENST00000465399 HMGN5P82970 282 aaKnown RBP15.61■□□□□ 0.09
ATG4B-214ENST00000465399 UPP1Q16831 310 aa15.61■□□□□ 0.09
ATG4B-214ENST00000465399 PABPC1LQ4VXU2 614 aaKnown RBP15.61■□□□□ 0.09
ATG4B-214ENST00000465399 NT5DC1Q5TFE4 455 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms