RNA–Protein interactions for RNA: ENST00000465269.5

HDAC6-214, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,139 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-214ENST00000465269 VWA8A3KMH1 1905 aa16.69■□□□□ 0.26
HDAC6-214ENST00000465269 SRRM3A6NNA2 597 aaPredicted RBP16.69■□□□□ 0.26
HDAC6-214ENST00000465269 GOLGA8AA7E2F4 631 aa16.69■□□□□ 0.26
HDAC6-214ENST00000465269 GOLGA8BA8MQT2 603 aa16.69■□□□□ 0.26
HDAC6-214ENST00000465269 hCG_1984214I3L0E3 225 aa16.69■□□□□ 0.26
HDAC6-214ENST00000465269 MAN2B1O00754 1011 aa16.69■□□□□ 0.26
HDAC6-214ENST00000465269 PSMD10O75832 226 aa16.69■□□□□ 0.26
HDAC6-214ENST00000465269 CENPBP07199 599 aaPredicted RBP16.69■□□□□ 0.26
HDAC6-214ENST00000465269 CCNE1P24864 410 aa16.69■□□□□ 0.26
HDAC6-214ENST00000465269 GDI1P31150 447 aa16.69■□□□□ 0.26
HDAC6-214ENST00000465269 HOXA9P31269 272 aa16.69■□□□□ 0.26
HDAC6-214ENST00000465269 OR1D2P34982 312 aa16.69■□□□□ 0.26
HDAC6-214ENST00000465269 PXNP49023 591 aaPredicted RBP16.69■□□□□ 0.26
HDAC6-214ENST00000465269 LIMK1P53667 647 aa16.69■□□□□ 0.26
HDAC6-214ENST00000465269 CREMQ03060 361 aa16.69■□□□□ 0.26
HDAC6-214ENST00000465269 HSP90AA2PQ14568 343 aaPredicted RBP16.69■□□□□ 0.26
HDAC6-214ENST00000465269 PFKFB3Q16875 520 aaPredicted RBP16.69■□□□□ 0.26
HDAC6-214ENST00000465269 TCEAL6Q6IPX3 200 aa16.69■□□□□ 0.26
HDAC6-214ENST00000465269 SYNE3Q6ZMZ3 975 aa16.69■□□□□ 0.26
HDAC6-214ENST00000465269 MAMSTRQ6ZN01 415 aa16.69■□□□□ 0.26
HDAC6-214ENST00000465269 TEX2Q8IWB9 1127 aa16.69■□□□□ 0.26
HDAC6-214ENST00000465269 ZNF713Q8N859 430 aaPredicted RBP16.69■□□□□ 0.26
HDAC6-214ENST00000465269 KDF1Q8NAX2 398 aaPredicted RBP16.69■□□□□ 0.26
HDAC6-214ENST00000465269 PIK3R5Q8WYR1 880 aa16.69■□□□□ 0.26
HDAC6-214ENST00000465269 DNASE1L2Q92874 299 aa16.69■□□□□ 0.26
HDAC6-214ENST00000465269 TCEAL3Q969E4 200 aa16.69■□□□□ 0.26
HDAC6-214ENST00000465269 ELSPBP1Q96BH3 223 aa16.69■□□□□ 0.26
HDAC6-214ENST00000465269 TMEM121BQ9BXQ6 578 aaPredicted RBP16.69■□□□□ 0.26
HDAC6-214ENST00000465269 WRAP73Q9P2S5 460 aaPredicted RBP16.69■□□□□ 0.26
HDAC6-214ENST00000465269 KCNH3Q9ULD8 1083 aa16.69■□□□□ 0.26
HDAC6-214ENST00000465269 BPTFQ12830 3046 aa16.69■□□□□ 0.26
HDAC6-214ENST00000465269 SF3B1O75533 1304 aaKnown RBP eCLIP16.69■□□□□ 0.26
HDAC6-214ENST00000465269 SPAG17Q6Q759 2223 aa16.68■□□□□ 0.26
HDAC6-214ENST00000465269 ZBTB43O43298 467 aa16.68■□□□□ 0.26
HDAC6-214ENST00000465269 ERLIN2O94905 339 aa16.68■□□□□ 0.26
HDAC6-214ENST00000465269 ADD1P35611 737 aaKnown RBP16.68■□□□□ 0.26
HDAC6-214ENST00000465269 VIPR2P41587 438 aa16.68■□□□□ 0.26
HDAC6-214ENST00000465269 SOX9P48436 509 aa16.68■□□□□ 0.26
HDAC6-214ENST00000465269 LRSAM1Q6UWE0 723 aa16.68■□□□□ 0.26
HDAC6-214ENST00000465269 LONP2Q86WA8 852 aa16.68■□□□□ 0.26
HDAC6-214ENST00000465269 GPR65Q8IYL9 337 aa16.68■□□□□ 0.26
HDAC6-214ENST00000465269 CNNM3Q8NE01 707 aa16.68■□□□□ 0.26
HDAC6-214ENST00000465269 ZSWIM3Q96MP5 696 aa16.68■□□□□ 0.26
HDAC6-214ENST00000465269 LSM14BQ9BX40 385 aaKnown RBP16.68■□□□□ 0.26
HDAC6-214ENST00000465269 ZMYND12Q9H0C1 365 aa16.68■□□□□ 0.26
HDAC6-214ENST00000465269 CSRNP2Q9H175 543 aa16.68■□□□□ 0.26
HDAC6-214ENST00000465269 ZNF334Q9HCZ1 680 aaPredicted RBP16.68■□□□□ 0.26
HDAC6-214ENST00000465269 LHX6Q9UPM6 363 aa16.68■□□□□ 0.26
HDAC6-214ENST00000465269 SOBPA7XYQ1 873 aa16.67■□□□□ 0.26
HDAC6-214ENST00000465269 EML1O00423 815 aa16.67■□□□□ 0.26
HDAC6-214ENST00000465269 B4GALT5O43286 388 aa16.67■□□□□ 0.26
HDAC6-214ENST00000465269 NPTXRO95502 500 aa16.67■□□□□ 0.26
HDAC6-214ENST00000465269 TDP2O95551 362 aa16.67■□□□□ 0.26
HDAC6-214ENST00000465269 CCR2P41597 374 aa16.67■□□□□ 0.26
HDAC6-214ENST00000465269 B3GNT9Q6UX72 402 aa16.67■□□□□ 0.26
HDAC6-214ENST00000465269 VITQ6UXI7 678 aa16.67■□□□□ 0.26
HDAC6-214ENST00000465269 MAP4K3Q8IVH8 894 aa16.67■□□□□ 0.26
HDAC6-214ENST00000465269 PSPC1Q8WXF1 523 aaKnown RBP16.67■□□□□ 0.26
HDAC6-214ENST00000465269 TRMT61BQ9BVS5 477 aaKnown RBP16.67■□□□□ 0.26
HDAC6-214ENST00000465269 C6orf50Q9HD87 102 aa16.67■□□□□ 0.26
HDAC6-214ENST00000465269 GDE1Q9NZC3 331 aa16.67■□□□□ 0.26
HDAC6-214ENST00000465269 PARP2Q9UGN5 583 aa16.67■□□□□ 0.26
HDAC6-214ENST00000465269 NAP1L2Q9ULW6 460 aaPredicted RBP16.67■□□□□ 0.26
HDAC6-214ENST00000465269 WASF3Q9UPY6 502 aa16.67■□□□□ 0.26
HDAC6-214ENST00000465269 GIT1Q9Y2X7 761 aa16.67■□□□□ 0.26
HDAC6-214ENST00000465269 MAST4O15021 2626 aa16.67■□□□□ 0.26
HDAC6-214ENST00000465269 NOVA1P51513 510 aaKnown RBP16.66■□□□□ 0.26
HDAC6-214ENST00000465269 GRIK3Q13003 919 aa16.66■□□□□ 0.26
HDAC6-214ENST00000465269 CREB3L3Q68CJ9 461 aa16.66■□□□□ 0.26
HDAC6-214ENST00000465269 NOTUMQ6P988 496 aa16.66■□□□□ 0.26
HDAC6-214ENST00000465269 KBTBD6Q86V97 674 aa16.66■□□□□ 0.26
HDAC6-214ENST00000465269 SPEM1Q8N4L4 309 aa16.66■□□□□ 0.26
HDAC6-214ENST00000465269 TTC8Q8TAM2 541 aa16.66■□□□□ 0.26
HDAC6-214ENST00000465269 SLC7A3Q8WY07 619 aa16.66■□□□□ 0.26
HDAC6-214ENST00000465269 CEP170P1Q96L14 293 aa16.66■□□□□ 0.26
HDAC6-214ENST00000465269 TRIM6Q9C030 488 aaPredicted RBP16.66■□□□□ 0.26
HDAC6-214ENST00000465269 LSG1Q9H089 658 aaKnown RBP16.66■□□□□ 0.26
HDAC6-214ENST00000465269 KLF18A0A0U1RQI7 1052 aa16.65■□□□□ 0.26
HDAC6-214ENST00000465269 ESYT2A0FGR8 921 aa16.65■□□□□ 0.26
HDAC6-214ENST00000465269 INO80B-WBP1J3KQ70 363 aa16.65■□□□□ 0.26
HDAC6-214ENST00000465269 ZBTB39O15060 712 aa16.65■□□□□ 0.26
HDAC6-214ENST00000465269 ZNF806P0C7X5 589 aa16.65■□□□□ 0.26
HDAC6-214ENST00000465269 GJA1P17302 382 aa16.65■□□□□ 0.26
HDAC6-214ENST00000465269 ARF4P18085 180 aaPredicted RBP16.65■□□□□ 0.26
HDAC6-214ENST00000465269 PTGDRQ13258 359 aa16.65■□□□□ 0.26
HDAC6-214ENST00000465269 RAB33AQ14088 237 aa16.65■□□□□ 0.26
HDAC6-214ENST00000465269 AMHR2Q16671 573 aa16.65■□□□□ 0.26
HDAC6-214ENST00000465269 FERMT3Q86UX7 667 aa16.65■□□□□ 0.26
HDAC6-214ENST00000465269 GPIHBP1Q8IV16 184 aa16.65■□□□□ 0.26
HDAC6-214ENST00000465269 CORO1BQ9BR76 489 aa16.65■□□□□ 0.26
HDAC6-214ENST00000465269 DHX33Q9H6R0 707 aaKnown RBP16.65■□□□□ 0.26
HDAC6-214ENST00000465269 ZFP14Q9HCL3 533 aa16.65■□□□□ 0.26
HDAC6-214ENST00000465269 CDY1Q9Y6F8 540 aa16.65■□□□□ 0.26
HDAC6-214ENST00000465269 CELSR3Q9NYQ7 3312 aa16.64■□□□□ 0.25
HDAC6-214ENST00000465269 SLC38A8A6NNN8 435 aa16.64■□□□□ 0.25
HDAC6-214ENST00000465269 I3L4J1 428 aa16.64■□□□□ 0.25
HDAC6-214ENST00000465269 POU2F2P09086 479 aa16.64■□□□□ 0.25
HDAC6-214ENST00000465269 CNR2P34972 360 aa16.64■□□□□ 0.25
HDAC6-214ENST00000465269 PSMC5P62195 406 aa16.64■□□□□ 0.25
HDAC6-214ENST00000465269 ZNF252P-AS1Q0IIN9 211 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms