RNA–Protein interactions for RNA: ENST00000465003.5

APTX-213, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,991 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-213ENST00000465003 OGTO15294 1046 aa12.95□□□□□ -0.34
APTX-213ENST00000465003 SMC2O95347 1197 aa12.95□□□□□ -0.34
APTX-213ENST00000465003 ANK1P16157 1881 aa12.95□□□□□ -0.34
APTX-213ENST00000465003 PMS1P54277 932 aaKnown RBP12.95□□□□□ -0.34
APTX-213ENST00000465003 ALCAMQ13740 583 aa12.95□□□□□ -0.34
APTX-213ENST00000465003 LMBRD2Q68DH5 695 aaPredicted RBP12.95□□□□□ -0.34
APTX-213ENST00000465003 BCL7CQ8WUZ0 217 aaPredicted RBP12.95□□□□□ -0.34
APTX-213ENST00000465003 KCNN1Q92952 543 aa12.95□□□□□ -0.34
APTX-213ENST00000465003 CCDC47Q96A33 483 aaKnown RBP12.95□□□□□ -0.34
APTX-213ENST00000465003 C18orf25Q96B23 403 aaPredicted RBP12.95□□□□□ -0.34
APTX-213ENST00000465003 SNX27Q96L92 541 aa12.95□□□□□ -0.34
APTX-213ENST00000465003 GSDMAQ96QA5 445 aa12.95□□□□□ -0.34
APTX-213ENST00000465003 KCTD10Q9H3F6 313 aa12.95□□□□□ -0.34
APTX-213ENST00000465003 TMEM206Q9H813 350 aa12.95□□□□□ -0.34
APTX-213ENST00000465003 HOOK1Q9UJC3 728 aaKnown RBP12.95□□□□□ -0.34
APTX-213ENST00000465003 PRG3Q9Y2Y8 225 aaPredicted RBP12.95□□□□□ -0.34
APTX-213ENST00000465003 MYO7AQ13402 2215 aa12.95□□□□□ -0.34
APTX-213ENST00000465003 HOXA2O43364 376 aa12.94□□□□□ -0.34
APTX-213ENST00000465003 YARSP54577 528 aaKnown RBP12.94□□□□□ -0.34
APTX-213ENST00000465003 SOX4Q06945 474 aaPredicted RBP12.94□□□□□ -0.34
APTX-213ENST00000465003 BMT2Q1RMZ1 405 aa12.94□□□□□ -0.34
APTX-213ENST00000465003 ZNF658Q5TYW1 1059 aaPredicted RBP12.94□□□□□ -0.34
APTX-213ENST00000465003 SCARA3Q6AZY7 606 aa12.94□□□□□ -0.34
APTX-213ENST00000465003 CBWD2Q8IUF1 395 aa12.94□□□□□ -0.34
APTX-213ENST00000465003 HACE1Q8IYU2 909 aa12.94□□□□□ -0.34
APTX-213ENST00000465003 URGCPQ8TCY9 931 aa12.94□□□□□ -0.34
APTX-213ENST00000465003 TGS1Q96RS0 853 aaKnown RBP12.94□□□□□ -0.34
APTX-213ENST00000465003 SEMA6BQ9H3T3 888 aa12.94□□□□□ -0.34
APTX-213ENST00000465003 HSPBP1Q9NZL4 362 aa12.94□□□□□ -0.34
APTX-213ENST00000465003 TMEM63CQ9P1W3 806 aa12.94□□□□□ -0.34
APTX-213ENST00000465003 KIAA1468Q9P260 1216 aa12.94□□□□□ -0.34
APTX-213ENST00000465003 CPSF3Q9UKF6 684 aaKnown RBP12.94□□□□□ -0.34
APTX-213ENST00000465003 GIT1Q9Y2X7 761 aa12.94□□□□□ -0.34
APTX-213ENST00000465003 PCDHGC5Q9Y5F6 944 aa12.94□□□□□ -0.34
APTX-213ENST00000465003 STYXL1Q9Y6J8 313 aa12.94□□□□□ -0.34
APTX-213ENST00000465003 SMIM28A0A1B0GU29 152 aa12.94□□□□□ -0.34
APTX-213ENST00000465003 LACTBL1A8MY62 500 aa12.94□□□□□ -0.34
APTX-213ENST00000465003 ITGB1P05556 798 aa12.94□□□□□ -0.34
APTX-213ENST00000465003 OR1G1P47890 313 aa12.94□□□□□ -0.34
APTX-213ENST00000465003 SLC11A1P49279 550 aa12.94□□□□□ -0.34
APTX-213ENST00000465003 BCAR1P56945 870 aa12.94□□□□□ -0.34
APTX-213ENST00000465003 PSMD2Q13200 908 aa12.94□□□□□ -0.34
APTX-213ENST00000465003 KLHL23Q8NBE8 558 aa12.94□□□□□ -0.34
APTX-213ENST00000465003 COLGALT1Q8NBJ5 622 aa12.94□□□□□ -0.34
APTX-213ENST00000465003 TUBGCP4Q9UGJ1 667 aa12.94□□□□□ -0.34
APTX-213ENST00000465003 ADRB2P07550 413 aa12.93□□□□□ -0.34
APTX-213ENST00000465003 NFICP08651 508 aa12.93□□□□□ -0.34
APTX-213ENST00000465003 CASP4P49662 377 aa12.93□□□□□ -0.34
APTX-213ENST00000465003 STX17P56962 302 aa12.93□□□□□ -0.34
APTX-213ENST00000465003 NAB2Q15742 525 aa12.93□□□□□ -0.34
APTX-213ENST00000465003 JADE1Q6IE81 842 aa12.93□□□□□ -0.34
APTX-213ENST00000465003 CAVIN1Q6NZI2 390 aaKnown RBP12.93□□□□□ -0.34
APTX-213ENST00000465003 KCNT2Q6UVM3 1135 aa12.93□□□□□ -0.34
APTX-213ENST00000465003 FBXO22Q8NEZ5 403 aa12.93□□□□□ -0.34
APTX-213ENST00000465003 MYLIPQ8WY64 445 aa12.93□□□□□ -0.34
APTX-213ENST00000465003 CLP1Q92989 425 aaKnown RBP12.93□□□□□ -0.34
APTX-213ENST00000465003 RPF1Q9H9Y2 349 aaKnown RBP12.93□□□□□ -0.34
APTX-213ENST00000465003 RMND1Q9NWS8 449 aa12.93□□□□□ -0.34
APTX-213ENST00000465003 PDCD11Q14690 1871 aaKnown RBP12.93□□□□□ -0.34
APTX-213ENST00000465003 RALGAPA2Q2PPJ7 1873 aa12.93□□□□□ -0.34
APTX-213ENST00000465003 UBE4BO95155 1302 aa12.93□□□□□ -0.34
APTX-213ENST00000465003 ATG2AQ2TAZ0 1938 aa12.93□□□□□ -0.34
APTX-213ENST00000465003 GRM6O15303 877 aa12.92□□□□□ -0.34
APTX-213ENST00000465003 THP07101 528 aa12.92□□□□□ -0.34
APTX-213ENST00000465003 CLTAP09496 248 aa12.92□□□□□ -0.34
APTX-213ENST00000465003 DNAJB1P25685 340 aa12.92□□□□□ -0.34
APTX-213ENST00000465003 ERVK-21P61565 698 aa12.92□□□□□ -0.34
APTX-213ENST00000465003 MORC3Q14149 939 aa12.92□□□□□ -0.34
APTX-213ENST00000465003 ADGRE1Q14246 886 aa12.92□□□□□ -0.34
APTX-213ENST00000465003 SLFN12LQ6IEE8 588 aa12.92□□□□□ -0.34
APTX-213ENST00000465003 ALKAL1Q6UXT8 129 aa12.92□□□□□ -0.34
APTX-213ENST00000465003 HS2ST1Q7LGA3 356 aa12.92□□□□□ -0.34
APTX-213ENST00000465003 APBB1IPQ7Z5R6 666 aaPredicted RBP12.92□□□□□ -0.34
APTX-213ENST00000465003 COLGALT2Q8IYK4 626 aa12.92□□□□□ -0.34
APTX-213ENST00000465003 KIF12Q96FN5 646 aa12.92□□□□□ -0.34
APTX-213ENST00000465003 B3GALT6Q96L58 329 aa12.92□□□□□ -0.34
APTX-213ENST00000465003 GUCD1Q96NT3 240 aa12.92□□□□□ -0.34
APTX-213ENST00000465003 FAM193BQ96PV7 902 aaPredicted RBP12.92□□□□□ -0.34
APTX-213ENST00000465003 MRPL9Q9BYD2 267 aaKnown RBP12.92□□□□□ -0.34
APTX-213ENST00000465003 PDE11AQ9HCR9 933 aa12.92□□□□□ -0.34
APTX-213ENST00000465003 TOPORSQ9NS56 1045 aaPredicted RBP12.92□□□□□ -0.34
APTX-213ENST00000465003 RBAKQ9NYW8 714 aaPredicted RBP12.92□□□□□ -0.34
APTX-213ENST00000465003 CTNND2Q9UQB3 1225 aa12.92□□□□□ -0.34
APTX-213ENST00000465003 TTC26A0AVF1 554 aa12.92□□□□□ -0.34
APTX-213ENST00000465003 NR3C1P04150 777 aa12.92□□□□□ -0.34
APTX-213ENST00000465003 GALTP07902 379 aa12.92□□□□□ -0.34
APTX-213ENST00000465003 ABCD1P33897 745 aa12.92□□□□□ -0.34
APTX-213ENST00000465003 BMPR1AP36894 532 aa12.92□□□□□ -0.34
APTX-213ENST00000465003 PPP2R3AQ06190 1150 aa12.92□□□□□ -0.34
APTX-213ENST00000465003 GRIK3Q13003 919 aa12.92□□□□□ -0.34
APTX-213ENST00000465003 DPCR1Q3MIW9 517 aa12.92□□□□□ -0.34
APTX-213ENST00000465003 CEP135Q66GS9 1140 aa12.92□□□□□ -0.34
APTX-213ENST00000465003 EFCAB13Q8IY85 973 aa12.92□□□□□ -0.34
APTX-213ENST00000465003 GPD1LQ8N335 351 aa12.92□□□□□ -0.34
APTX-213ENST00000465003 MICALL1Q8N3F8 863 aa12.92□□□□□ -0.34
APTX-213ENST00000465003 PPP1R10Q96QC0 940 aaKnown RBP12.92□□□□□ -0.34
APTX-213ENST00000465003 POP1Q99575 1024 aaKnown RBP12.92□□□□□ -0.34
APTX-213ENST00000465003 UBN1Q9NPG3 1134 aa12.92□□□□□ -0.34
APTX-213ENST00000465003 CNTN3Q9P232 1028 aa12.92□□□□□ -0.34
APTX-213ENST00000465003 PTPRJQ12913 1337 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms