RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 HSD17B14Q9BPX1 270 aa7.79□□□□□ -1.16
USP48-206ENST00000464577 NUP85Q9BW27 656 aa7.79□□□□□ -1.16
USP48-206ENST00000464577 STRA6Q9BX79 667 aa7.79□□□□□ -1.16
USP48-206ENST00000464577 PITPNM3Q9BZ71 974 aa7.79□□□□□ -1.16
USP48-206ENST00000464577 BCAS3Q9H6U6 928 aa7.79□□□□□ -1.16
USP48-206ENST00000464577 ARHGEF10LQ9HCE6 1279 aa7.79□□□□□ -1.16
USP48-206ENST00000464577 UBE2TQ9NPD8 197 aaPredicted RBP7.79□□□□□ -1.16
USP48-206ENST00000464577 NKX1-2Q9UD57 310 aaPredicted RBP7.79□□□□□ -1.16
USP48-206ENST00000464577 MROH7Q68CQ1 1323 aa7.79□□□□□ -1.16
USP48-206ENST00000464577 KLHL33A6NCF5 533 aa7.79□□□□□ -1.16
USP48-206ENST00000464577 EML1O00423 815 aa7.79□□□□□ -1.16
USP48-206ENST00000464577 PRPF4O43172 522 aaKnown RBP eCLIP7.79□□□□□ -1.16
USP48-206ENST00000464577 EXOC3O60645 756 aa7.79□□□□□ -1.16
USP48-206ENST00000464577 RPS6KA4O75676 772 aa7.79□□□□□ -1.16
USP48-206ENST00000464577 ASMTLO95671 621 aa7.79□□□□□ -1.16
USP48-206ENST00000464577 DLATP10515 647 aaKnown RBP7.79□□□□□ -1.16
USP48-206ENST00000464577 NEFHP12036 1026 aa7.79□□□□□ -1.16
USP48-206ENST00000464577 POLD1P28340 1107 aa7.79□□□□□ -1.16
USP48-206ENST00000464577 RASSF2P50749 326 aa7.79□□□□□ -1.16
USP48-206ENST00000464577 ITGA8P53708 1063 aa7.79□□□□□ -1.16
USP48-206ENST00000464577 GPSM2P81274 684 aa7.79□□□□□ -1.16
USP48-206ENST00000464577 CENPCQ03188 943 aa7.79□□□□□ -1.16
USP48-206ENST00000464577 MOGSQ13724 837 aa7.79□□□□□ -1.16
USP48-206ENST00000464577 KYNUQ16719 465 aa7.79□□□□□ -1.16
USP48-206ENST00000464577 TSNAXIP1Q2TAA8 658 aa7.79□□□□□ -1.16
USP48-206ENST00000464577 ANO7Q6IWH7 933 aa7.79□□□□□ -1.16
USP48-206ENST00000464577 VSIG1Q86XK7 387 aa7.79□□□□□ -1.16
USP48-206ENST00000464577 FAM178BQ8IXR5 827 aa7.79□□□□□ -1.16
USP48-206ENST00000464577 C12orf56Q8IXR9 622 aa7.79□□□□□ -1.16
USP48-206ENST00000464577 FAM71AQ8IYT1 594 aa7.79□□□□□ -1.16
USP48-206ENST00000464577 CYP4X1Q8N118 509 aa7.79□□□□□ -1.16
USP48-206ENST00000464577 LARGE2Q8N3Y3 721 aa7.79□□□□□ -1.16
USP48-206ENST00000464577 FAM13CQ8NE31 585 aa7.79□□□□□ -1.16
USP48-206ENST00000464577 KCNV2Q8TDN2 545 aa7.79□□□□□ -1.16
USP48-206ENST00000464577 EPS8L1Q8TE68 723 aa7.79□□□□□ -1.16
USP48-206ENST00000464577 ERP27Q96DN0 273 aa7.79□□□□□ -1.16
USP48-206ENST00000464577 CCDC17Q96LX7 622 aa7.79□□□□□ -1.16
USP48-206ENST00000464577 POP1Q99575 1024 aaKnown RBP7.79□□□□□ -1.16
USP48-206ENST00000464577 AMNQ9BXJ7 453 aa7.79□□□□□ -1.16
USP48-206ENST00000464577 IKZF4Q9H2S9 585 aa7.79□□□□□ -1.16
USP48-206ENST00000464577 TLE6Q9H808 572 aa7.79□□□□□ -1.16
USP48-206ENST00000464577 MLXIPLQ9NP71 852 aa7.79□□□□□ -1.16
USP48-206ENST00000464577 SRP68Q9UHB9 627 aaKnown RBP7.79□□□□□ -1.16
USP48-206ENST00000464577 ANAPC5Q9UJX4 755 aa7.79□□□□□ -1.16
USP48-206ENST00000464577 NAALADL1Q9UQQ1 740 aa7.79□□□□□ -1.16
USP48-206ENST00000464577 STRCQ7RTU9 1775 aa7.78□□□□□ -1.16
USP48-206ENST00000464577 EMSYQ7Z589 1322 aa7.78□□□□□ -1.16
USP48-206ENST00000464577 EME2A4GXA9 379 aaPredicted RBP7.78□□□□□ -1.16
USP48-206ENST00000464577 SFI1A8K8P3 1242 aa7.78□□□□□ -1.16
USP48-206ENST00000464577 CLDN3O15551 220 aa7.78□□□□□ -1.16
USP48-206ENST00000464577 UFL1O94874 794 aa7.78□□□□□ -1.16
USP48-206ENST00000464577 SNUPNO95149 360 aaKnown RBP7.78□□□□□ -1.16
USP48-206ENST00000464577 CETPP11597 493 aa7.78□□□□□ -1.16
USP48-206ENST00000464577 CDC25CP30307 473 aa7.78□□□□□ -1.16
USP48-206ENST00000464577 ALDH3A1P30838 453 aa7.78□□□□□ -1.16
USP48-206ENST00000464577 PEX19P40855 299 aa7.78□□□□□ -1.16
USP48-206ENST00000464577 CTCFP49711 727 aaPredicted RBP7.78□□□□□ -1.16
USP48-206ENST00000464577 RAD23BP54727 409 aa7.78□□□□□ -1.16
USP48-206ENST00000464577 WDR4P57081 412 aaKnown RBP7.78□□□□□ -1.16
USP48-206ENST00000464577 MCCD1P59942 119 aaPredicted RBP7.78□□□□□ -1.16
USP48-206ENST00000464577 RBBP5Q15291 538 aaKnown RBP7.78□□□□□ -1.16
USP48-206ENST00000464577 APBB1IPQ7Z5R6 666 aaPredicted RBP7.78□□□□□ -1.16
USP48-206ENST00000464577 NOP9Q86U38 636 aaKnown RBP7.78□□□□□ -1.16
USP48-206ENST00000464577 TDRPQ86YL5 185 aa7.78□□□□□ -1.16
USP48-206ENST00000464577 SRRM1Q8IYB3 904 aaKnown RBP7.78□□□□□ -1.16
USP48-206ENST00000464577 DENND1AQ8TEH3 1009 aa7.78□□□□□ -1.16
USP48-206ENST00000464577 C1orf54Q8WWF1 131 aa7.78□□□□□ -1.16
USP48-206ENST00000464577 MAML1Q92585 1016 aa7.78□□□□□ -1.16
USP48-206ENST00000464577 MKL1Q969V6 931 aa7.78□□□□□ -1.16
USP48-206ENST00000464577 ZNF653Q96CK0 615 aa7.78□□□□□ -1.16
USP48-206ENST00000464577 GPR101Q96P66 508 aaPredicted RBP7.78□□□□□ -1.16
USP48-206ENST00000464577 LRRC37BQ96QE4 947 aa7.78□□□□□ -1.16
USP48-206ENST00000464577 FAM167BQ9BTA0 163 aa7.78□□□□□ -1.16
USP48-206ENST00000464577 DCLK3Q9C098 648 aa7.78□□□□□ -1.16
USP48-206ENST00000464577 YIPF3Q9GZM5 350 aa7.78□□□□□ -1.16
USP48-206ENST00000464577 RGL1Q9NZL6 768 aa7.78□□□□□ -1.16
USP48-206ENST00000464577 SENP1Q9P0U3 644 aa7.78□□□□□ -1.16
USP48-206ENST00000464577 SMG5Q9UPR3 1016 aaKnown RBP7.78□□□□□ -1.16
USP48-206ENST00000464577 CHKBQ9Y259 395 aa7.78□□□□□ -1.16
USP48-206ENST00000464577 SUGT1Q9Y2Z0 365 aa7.78□□□□□ -1.16
USP48-206ENST00000464577 NEU2Q9Y3R4 380 aa7.78□□□□□ -1.16
USP48-206ENST00000464577 RBBP6Q7Z6E9 1792 aaKnown RBP7.78□□□□□ -1.16
USP48-206ENST00000464577 LRRD1A4D1F6 860 aa7.77□□□□□ -1.17
USP48-206ENST00000464577 ATMINO43313 823 aaPredicted RBP7.77□□□□□ -1.17
USP48-206ENST00000464577 ECE2O60344 883 aa7.77□□□□□ -1.17
USP48-206ENST00000464577 EDF1O60869 148 aaKnown RBP7.77□□□□□ -1.17
USP48-206ENST00000464577 SGPL1O95470 568 aa7.77□□□□□ -1.17
USP48-206ENST00000464577 VAMP7P51809 220 aa7.77□□□□□ -1.17
USP48-206ENST00000464577 INHBEP58166 350 aa7.77□□□□□ -1.17
USP48-206ENST00000464577 FMO1Q01740 532 aa7.77□□□□□ -1.17
USP48-206ENST00000464577 PPP2R5CQ13362 524 aa7.77□□□□□ -1.17
USP48-206ENST00000464577 PICALMQ13492 652 aa7.77□□□□□ -1.17
USP48-206ENST00000464577 ALCAMQ13740 583 aa7.77□□□□□ -1.17
USP48-206ENST00000464577 SPARCL1Q14515 664 aa7.77□□□□□ -1.17
USP48-206ENST00000464577 PDK4Q16654 411 aa7.77□□□□□ -1.17
USP48-206ENST00000464577 TMEM63BQ5T3F8 832 aa7.77□□□□□ -1.17
USP48-206ENST00000464577 ZNF746Q6NUN9 644 aaPredicted RBP7.77□□□□□ -1.17
USP48-206ENST00000464577 SLC30A9Q6PML9 568 aa7.77□□□□□ -1.17
USP48-206ENST00000464577 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.77□□□□□ -1.17
USP48-206ENST00000464577 MFN1Q8IWA4 741 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms