RNA–Protein interactions for RNA: ENST00000464539.1

TNRC6A-205, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 1 (best)

Gene TNRC6A, Length 1,853 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-205ENST00000464539 CDC42EP4Q9H3Q1 356 aaKnown RBP12.3□□□□□ -0.44
TNRC6A-205ENST00000464539 TYW1Q9NV66 732 aaKnown RBP12.3□□□□□ -0.44
TNRC6A-205ENST00000464539 ROBO3Q96MS0 1386 aa12.3□□□□□ -0.44
TNRC6A-205ENST00000464539 KDM3AQ9Y4C1 1321 aa12.3□□□□□ -0.44
TNRC6A-205ENST00000464539 CDH16O75309 829 aa12.29□□□□□ -0.44
TNRC6A-205ENST00000464539 PYGBP11216 843 aa12.29□□□□□ -0.44
TNRC6A-205ENST00000464539 XRCC5P13010 732 aaKnown RBP12.29□□□□□ -0.44
TNRC6A-205ENST00000464539 TARSP26639 723 aaKnown RBP12.29□□□□□ -0.44
TNRC6A-205ENST00000464539 DYNLL1P63167 89 aaKnown RBP12.29□□□□□ -0.44
TNRC6A-205ENST00000464539 MPP2Q14168 576 aa12.29□□□□□ -0.44
TNRC6A-205ENST00000464539 AOC3Q16853 763 aa12.29□□□□□ -0.44
TNRC6A-205ENST00000464539 HABP4Q5JVS0 413 aaKnown RBP12.29□□□□□ -0.44
TNRC6A-205ENST00000464539 SEL1L2Q5TEA6 688 aa12.29□□□□□ -0.44
TNRC6A-205ENST00000464539 DAB2IPQ5VWQ8 1189 aa12.29□□□□□ -0.44
TNRC6A-205ENST00000464539 FOXB2Q5VYV0 432 aa12.29□□□□□ -0.44
TNRC6A-205ENST00000464539 CEP128Q6ZU80 1094 aa12.29□□□□□ -0.44
TNRC6A-205ENST00000464539 GLIS3Q8NEA6 775 aa12.29□□□□□ -0.44
TNRC6A-205ENST00000464539 SUPT20HQ8NEM7 779 aa12.29□□□□□ -0.44
TNRC6A-205ENST00000464539 UCMAQ8WVF2 138 aa12.29□□□□□ -0.44
TNRC6A-205ENST00000464539 PLEKHG4BQ96PX9 1271 aa12.29□□□□□ -0.44
TNRC6A-205ENST00000464539 CRAMP1Q96RY5 1269 aa12.29□□□□□ -0.44
TNRC6A-205ENST00000464539 HAPLN3Q96S86 360 aa12.29□□□□□ -0.44
TNRC6A-205ENST00000464539 WNT8AQ9H1J5 351 aa12.29□□□□□ -0.44
TNRC6A-205ENST00000464539 SYNCQ9H7C4 482 aa12.29□□□□□ -0.44
TNRC6A-205ENST00000464539 OSGEPQ9NPF4 335 aa12.29□□□□□ -0.44
TNRC6A-205ENST00000464539 ABCF2Q9UG63 623 aa12.29□□□□□ -0.44
TNRC6A-205ENST00000464539 CIDEBQ9UHD4 219 aa12.29□□□□□ -0.44
TNRC6A-205ENST00000464539 MYH3P11055 1940 aa12.29□□□□□ -0.44
TNRC6A-205ENST00000464539 ANKRD36CQ5JPF3 1778 aa12.29□□□□□ -0.44
TNRC6A-205ENST00000464539 FAM47DPA6NHR8 397 aa12.29□□□□□ -0.44
TNRC6A-205ENST00000464539 ERVV-1B6SEH8 477 aa12.29□□□□□ -0.44
TNRC6A-205ENST00000464539 SLC16A3O15427 465 aaKnown RBP12.29□□□□□ -0.44
TNRC6A-205ENST00000464539 ZSCAN9O15535 394 aaPredicted RBP12.29□□□□□ -0.44
TNRC6A-205ENST00000464539 MAP3K7O43318 606 aa12.29□□□□□ -0.44
TNRC6A-205ENST00000464539 CYTH3O43739 400 aa12.29□□□□□ -0.44
TNRC6A-205ENST00000464539 CALUO43852 315 aaPredicted RBP12.29□□□□□ -0.44
TNRC6A-205ENST00000464539 CCDC22O60826 627 aa12.29□□□□□ -0.44
TNRC6A-205ENST00000464539 PLCG2P16885 1265 aa12.29□□□□□ -0.44
TNRC6A-205ENST00000464539 NR2F2P24468 414 aa12.29□□□□□ -0.44
TNRC6A-205ENST00000464539 EPHB2P29323 1055 aa12.29□□□□□ -0.44
TNRC6A-205ENST00000464539 SOX5P35711 763 aa12.29□□□□□ -0.44
TNRC6A-205ENST00000464539 SFSWAPQ12872 951 aaKnown RBP12.29□□□□□ -0.44
TNRC6A-205ENST00000464539 STAT4Q14765 748 aa12.29□□□□□ -0.44
TNRC6A-205ENST00000464539 LRRC74BQ6ZQY2 392 aa12.29□□□□□ -0.44
TNRC6A-205ENST00000464539 TTC8Q8TAM2 541 aa12.29□□□□□ -0.44
TNRC6A-205ENST00000464539 SCFD1Q8WVM8 642 aa12.29□□□□□ -0.44
TNRC6A-205ENST00000464539 PPP1R14BQ96C90 147 aa12.29□□□□□ -0.44
TNRC6A-205ENST00000464539 RBM17Q96I25 401 aaKnown RBP12.29□□□□□ -0.44
TNRC6A-205ENST00000464539 OLFM3Q96PB7 478 aa12.29□□□□□ -0.44
TNRC6A-205ENST00000464539 CENPKQ9BS16 269 aa12.29□□□□□ -0.44
TNRC6A-205ENST00000464539 MMADHCQ9H3L0 296 aaPredicted RBP12.29□□□□□ -0.44
TNRC6A-205ENST00000464539 SIX2Q9NPC8 291 aa12.29□□□□□ -0.44
TNRC6A-205ENST00000464539 DCP1AQ9NPI6 582 aaPredicted RBP12.29□□□□□ -0.44
TNRC6A-205ENST00000464539 STX18Q9P2W9 335 aaKnown RBP12.29□□□□□ -0.44
TNRC6A-205ENST00000464539 PHTF1Q9UMS5 762 aa12.29□□□□□ -0.44
TNRC6A-205ENST00000464539 CREB1P16220 341 aa12.28□□□□□ -0.44
TNRC6A-205ENST00000464539 MUTP22033 750 aa12.28□□□□□ -0.44
TNRC6A-205ENST00000464539 RPL13P26373 211 aaKnown RBP12.28□□□□□ -0.44
TNRC6A-205ENST00000464539 FOXN2P32314 431 aa12.28□□□□□ -0.44
TNRC6A-205ENST00000464539 IGHMBP2P38935 993 aaKnown RBP12.28□□□□□ -0.44
TNRC6A-205ENST00000464539 HIRAP54198 1017 aaPredicted RBP12.28□□□□□ -0.44
TNRC6A-205ENST00000464539 LSAMPQ13449 338 aa12.28□□□□□ -0.44
TNRC6A-205ENST00000464539 TNIP1Q15025 636 aa12.28□□□□□ -0.44
TNRC6A-205ENST00000464539 KHDC1Q4VXA5 237 aaKnown RBP12.28□□□□□ -0.44
TNRC6A-205ENST00000464539 RASIP1Q5U651 963 aa12.28□□□□□ -0.44
TNRC6A-205ENST00000464539 RHBDF2Q6PJF5 856 aa12.28□□□□□ -0.44
TNRC6A-205ENST00000464539 MIGA2Q7L4E1 593 aa12.28□□□□□ -0.44
TNRC6A-205ENST00000464539 EPM2AIP1Q7L775 607 aaPredicted RBP12.28□□□□□ -0.44
TNRC6A-205ENST00000464539 OTUD6AQ7L8S5 288 aa12.28□□□□□ -0.44
TNRC6A-205ENST00000464539 RELL1Q8IUW5 271 aa12.28□□□□□ -0.44
TNRC6A-205ENST00000464539 CCDC105Q8IYK2 499 aa12.28□□□□□ -0.44
TNRC6A-205ENST00000464539 REM2Q8IYK8 340 aaPredicted RBP12.28□□□□□ -0.44
TNRC6A-205ENST00000464539 C2orf69Q8N8R5 385 aa12.28□□□□□ -0.44
TNRC6A-205ENST00000464539 LNX1Q8TBB1 728 aaPredicted RBP12.28□□□□□ -0.44
TNRC6A-205ENST00000464539 SPATA16Q9BXB7 569 aa12.28□□□□□ -0.44
TNRC6A-205ENST00000464539 STK33Q9BYT3 514 aa12.28□□□□□ -0.44
TNRC6A-205ENST00000464539 UBE2OQ9C0C9 1292 aaKnown RBP12.28□□□□□ -0.44
TNRC6A-205ENST00000464539 LRRC19Q9H756 370 aa12.28□□□□□ -0.44
TNRC6A-205ENST00000464539 GBA2Q9HCG7 927 aaPredicted RBP12.28□□□□□ -0.44
TNRC6A-205ENST00000464539 ALG6Q9Y672 507 aa12.28□□□□□ -0.44
TNRC6A-205ENST00000464539 A0A1B0GVG6 124 aa12.27□□□□□ -0.44
TNRC6A-205ENST00000464539 A8MXQ7 604 aa12.27□□□□□ -0.44
TNRC6A-205ENST00000464539 H0Y3Z8 333 aa12.27□□□□□ -0.44
TNRC6A-205ENST00000464539 PDXKO00764 312 aa12.27□□□□□ -0.44
TNRC6A-205ENST00000464539 C2CD2LO14523 706 aa12.27□□□□□ -0.44
TNRC6A-205ENST00000464539 EDF1O60869 148 aaKnown RBP12.27□□□□□ -0.44
TNRC6A-205ENST00000464539 ENTPD5O75356 428 aa12.27□□□□□ -0.44
TNRC6A-205ENST00000464539 ASMTLO95671 621 aa12.27□□□□□ -0.44
TNRC6A-205ENST00000464539 ECEL1O95672 775 aa12.27□□□□□ -0.44
TNRC6A-205ENST00000464539 MAN1A1P33908 653 aa12.27□□□□□ -0.44
TNRC6A-205ENST00000464539 COPB2P35606 906 aa12.27□□□□□ -0.44
TNRC6A-205ENST00000464539 TFAP4Q01664 338 aa12.27□□□□□ -0.44
TNRC6A-205ENST00000464539 CDR2Q01850 454 aa12.27□□□□□ -0.44
TNRC6A-205ENST00000464539 ZNF211Q13398 564 aaPredicted RBP12.27□□□□□ -0.44
TNRC6A-205ENST00000464539 SPARCL1Q14515 664 aa12.27□□□□□ -0.44
TNRC6A-205ENST00000464539 CNPY1Q3B7I2 92 aa12.27□□□□□ -0.44
TNRC6A-205ENST00000464539 TTC27Q6P3X3 843 aa12.27□□□□□ -0.44
TNRC6A-205ENST00000464539 ZNF365Q70YC5 407 aa12.27□□□□□ -0.44
TNRC6A-205ENST00000464539 ADAT2Q7Z6V5 191 aaKnown RBP12.27□□□□□ -0.44
TNRC6A-205ENST00000464539 TRPM4Q8TD43 1214 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms