RNA–Protein interactions for RNA: ENST00000463631.1

HMGN1-209, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-209ENST00000463631 PDZD7Q9H5P4 517 aa19.12■□□□□ 0.65
HMGN1-209ENST00000463631 GPRC5CQ9NQ84 441 aa19.12■□□□□ 0.65
HMGN1-209ENST00000463631 NOTCH4Q99466 2003 aa19.12■□□□□ 0.65
HMGN1-209ENST00000463631 KANSL1LA0AUZ9 987 aa19.11■□□□□ 0.65
HMGN1-209ENST00000463631 POTEMA6NI47 508 aa19.11■□□□□ 0.65
HMGN1-209ENST00000463631 XYLBO75191 536 aa19.11■□□□□ 0.65
HMGN1-209ENST00000463631 RECQL4O94761 1208 aa19.11■□□□□ 0.65
HMGN1-209ENST00000463631 THP07101 528 aa19.11■□□□□ 0.65
HMGN1-209ENST00000463631 GPC5P78333 572 aa19.11■□□□□ 0.65
HMGN1-209ENST00000463631 PRKCQQ04759 706 aa19.11■□□□□ 0.65
HMGN1-209ENST00000463631 ZNF528Q3MIS6 628 aa19.11■□□□□ 0.65
HMGN1-209ENST00000463631 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.11■□□□□ 0.65
HMGN1-209ENST00000463631 ZBTB8OSQ8IWT0 167 aa19.11■□□□□ 0.65
HMGN1-209ENST00000463631 MAML2Q8IZL2 1156 aaPredicted RBP19.11■□□□□ 0.65
HMGN1-209ENST00000463631 HASPINQ8TF76 798 aa19.11■□□□□ 0.65
HMGN1-209ENST00000463631 BORCS6Q96GS4 357 aa19.11■□□□□ 0.65
HMGN1-209ENST00000463631 C2orf40Q9H1Z8 148 aa19.11■□□□□ 0.65
HMGN1-209ENST00000463631 KCNH3Q9ULD8 1083 aa19.11■□□□□ 0.65
HMGN1-209ENST00000463631 TMEM189-UBE2V1I3L0A0 370 aa19.1■□□□□ 0.65
HMGN1-209ENST00000463631 SPATA31C1P0DKV0 1188 aa19.1■□□□□ 0.65
HMGN1-209ENST00000463631 TXKP42681 527 aa19.1■□□□□ 0.65
HMGN1-209ENST00000463631 RBM25P49756 843 aaKnown RBP19.1■□□□□ 0.65
HMGN1-209ENST00000463631 NTHL1P78549 312 aa19.1■□□□□ 0.65
HMGN1-209ENST00000463631 RAB33AQ14088 237 aa19.1■□□□□ 0.65
HMGN1-209ENST00000463631 MLF2Q15773 248 aaPredicted RBP19.1■□□□□ 0.65
HMGN1-209ENST00000463631 UVSSAQ2YD98 709 aa19.1■□□□□ 0.65
HMGN1-209ENST00000463631 RSPO2Q6UXX9 243 aaPredicted RBP19.1■□□□□ 0.65
HMGN1-209ENST00000463631 KIAA2013Q8IYS2 634 aa19.1■□□□□ 0.65
HMGN1-209ENST00000463631 SUMF1Q8NBK3 374 aa19.1■□□□□ 0.65
HMGN1-209ENST00000463631 CCDC113Q9H0I3 377 aa19.1■□□□□ 0.65
HMGN1-209ENST00000463631 TUFT1Q9NNX1 390 aa19.1■□□□□ 0.65
HMGN1-209ENST00000463631 FBXO4Q9UKT5 387 aa19.1■□□□□ 0.65
HMGN1-209ENST00000463631 COL4A3Q01955 1670 aa19.1■□□□□ 0.65
HMGN1-209ENST00000463631 TTLL13PA6NNM8 815 aa19.09■□□□□ 0.65
HMGN1-209ENST00000463631 WNT7AO00755 349 aa19.09■□□□□ 0.65
HMGN1-209ENST00000463631 ADAM12O43184 909 aa19.09■□□□□ 0.65
HMGN1-209ENST00000463631 MAGEA9P43362 315 aa19.09■□□□□ 0.65
HMGN1-209ENST00000463631 PFKPQ01813 784 aa19.09■□□□□ 0.65
HMGN1-209ENST00000463631 PRPF4BQ13523 1007 aaKnown RBP19.09■□□□□ 0.65
HMGN1-209ENST00000463631 ANKRD1Q15327 319 aa19.09■□□□□ 0.65
HMGN1-209ENST00000463631 SLC7A14Q8TBB6 771 aa19.09■□□□□ 0.65
HMGN1-209ENST00000463631 ADPGKQ9BRR6 497 aa19.09■□□□□ 0.65
HMGN1-209ENST00000463631 BCO2Q9BYV7 579 aa19.09■□□□□ 0.65
HMGN1-209ENST00000463631 SNTG2Q9NY99 539 aa19.09■□□□□ 0.65
HMGN1-209ENST00000463631 MTRRQ9UBK8 725 aa19.09■□□□□ 0.65
HMGN1-209ENST00000463631 TPRP12270 2363 aaKnown RBP19.08■□□□□ 0.65
HMGN1-209ENST00000463631 ACKR2O00590 384 aa19.08■□□□□ 0.64
HMGN1-209ENST00000463631 SPTLC1O15269 473 aa19.08■□□□□ 0.64
HMGN1-209ENST00000463631 CCL16O15467 120 aa19.08■□□□□ 0.64
HMGN1-209ENST00000463631 DTNBO60941 627 aa19.08■□□□□ 0.64
HMGN1-209ENST00000463631 LRRN2O75325 713 aa19.08■□□□□ 0.64
HMGN1-209ENST00000463631 FGFR3P22607 806 aa19.08■□□□□ 0.64
HMGN1-209ENST00000463631 SNW1Q13573 536 aaKnown RBP19.08■□□□□ 0.64
HMGN1-209ENST00000463631 PUM1Q14671 1186 aaKnown RBP eCLIP19.08■□□□□ 0.642e-6■□□□□ 10.8
HMGN1-209ENST00000463631 MAPK6Q16659 721 aa19.08■□□□□ 0.64
HMGN1-209ENST00000463631 AXDND1Q5T1B0 1012 aaPredicted RBP19.08■□□□□ 0.64
HMGN1-209ENST00000463631 CATSPER3Q86XQ3 398 aa19.08■□□□□ 0.64
HMGN1-209ENST00000463631 CEP57Q86XR8 500 aa19.08■□□□□ 0.64
HMGN1-209ENST00000463631 NPAS3Q8IXF0 933 aa19.08■□□□□ 0.64
HMGN1-209ENST00000463631 DIS3L2Q8IYB7 885 aaKnown RBP19.08■□□□□ 0.64
HMGN1-209ENST00000463631 ST13P5Q8NFI4 369 aaPredicted RBP19.08■□□□□ 0.64
HMGN1-209ENST00000463631 DLL3Q9NYJ7 618 aa19.08■□□□□ 0.64
HMGN1-209ENST00000463631 SPTBN2O15020 2390 aa19.08■□□□□ 0.64
HMGN1-209ENST00000463631 ACACBO00763 2458 aa19.07■□□□□ 0.64
HMGN1-209ENST00000463631 BTBD18B2RXH4 712 aa19.07■□□□□ 0.64
HMGN1-209ENST00000463631 KINO60870 393 aaKnown RBP19.07■□□□□ 0.64
HMGN1-209ENST00000463631 PRKCBP05771 671 aa19.07■□□□□ 0.64
HMGN1-209ENST00000463631 ATP2B1P20020 1258 aa19.07■□□□□ 0.64
HMGN1-209ENST00000463631 OR1D2P34982 312 aa19.07■□□□□ 0.64
HMGN1-209ENST00000463631 NAMPTP43490 491 aa19.07■□□□□ 0.64
HMGN1-209ENST00000463631 ANAPC15P60006 121 aa19.07■□□□□ 0.64
HMGN1-209ENST00000463631 DCAF4L1Q3SXM0 396 aa19.07■□□□□ 0.64
HMGN1-209ENST00000463631 PABPC1LQ4VXU2 614 aaKnown RBP19.07■□□□□ 0.64
HMGN1-209ENST00000463631 SLC44A4Q53GD3 710 aa19.07■□□□□ 0.64
HMGN1-209ENST00000463631 DGLUCYQ7Z3D6 616 aa19.07■□□□□ 0.64
HMGN1-209ENST00000463631 ITFG1Q8TB96 612 aa19.07■□□□□ 0.64
HMGN1-209ENST00000463631 BSNDQ8WZ55 320 aa19.07■□□□□ 0.64
HMGN1-209ENST00000463631 GTF3C6Q969F1 213 aa19.07■□□□□ 0.64
HMGN1-209ENST00000463631 NACC1Q96RE7 527 aa19.07■□□□□ 0.64
HMGN1-209ENST00000463631 POLR3CQ9BUI4 534 aaPredicted RBP19.07■□□□□ 0.64
HMGN1-209ENST00000463631 CXCL16Q9H2A7 254 aa19.07■□□□□ 0.64
HMGN1-209ENST00000463631 POLIQ9UNA4 740 aa19.07■□□□□ 0.64
HMGN1-209ENST00000463631 PCDHGA2Q9Y5H1 932 aa19.07■□□□□ 0.64
HMGN1-209ENST00000463631 BACE2Q9Y5Z0 518 aa19.07■□□□□ 0.64
HMGN1-209ENST00000463631 F5P12259 2224 aa19.06■□□□□ 0.64
HMGN1-209ENST00000463631 A0A087WWV3 80 aa19.06■□□□□ 0.64
HMGN1-209ENST00000463631 MED19A0JLT2 244 aaPredicted RBP19.06■□□□□ 0.64
HMGN1-209ENST00000463631 MED24O75448 989 aa19.06■□□□□ 0.64
HMGN1-209ENST00000463631 EDN1P05305 212 aa19.06■□□□□ 0.64
HMGN1-209ENST00000463631 PPP2R5AQ15172 486 aa19.06■□□□□ 0.64
HMGN1-209ENST00000463631 MAEAQ7L5Y9 396 aa19.06■□□□□ 0.64
HMGN1-209ENST00000463631 NOSTRINQ8IVI9 506 aa19.06■□□□□ 0.64
HMGN1-209ENST00000463631 NSUN7Q8NE18 718 aaKnown RBP19.06■□□□□ 0.64
HMGN1-209ENST00000463631 PPP1R10Q96QC0 940 aaKnown RBP19.06■□□□□ 0.64
HMGN1-209ENST00000463631 HINFPQ9BQA5 517 aa19.06■□□□□ 0.64
HMGN1-209ENST00000463631 KXD1Q9BQD3 176 aa19.06■□□□□ 0.64
HMGN1-209ENST00000463631 TMEM60Q9H2L4 133 aa19.06■□□□□ 0.64
HMGN1-209ENST00000463631 LTB4R2Q9NPC1 389 aa19.06■□□□□ 0.64
HMGN1-209ENST00000463631 AVENQ9NQS1 362 aaPredicted RBP19.06■□□□□ 0.64
HMGN1-209ENST00000463631 GDE1Q9NZC3 331 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms