RNA–Protein interactions for RNA: ENST00000463470.1

VPS72-203, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 1 (best)

Gene VPS72, Length 277 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-203ENST00000463470 POU5F1Q01860 360 aaKnown RBP5.04□□□□□ -1.6
VPS72-203ENST00000463470 DHX9Q08211 1270 aaKnown RBP5.04□□□□□ -1.6
VPS72-203ENST00000463470 STRN3Q13033 797 aa5.04□□□□□ -1.6
VPS72-203ENST00000463470 ITGB3BPQ13352 177 aaPredicted RBP5.04□□□□□ -1.6
VPS72-203ENST00000463470 PKN2Q16513 984 aaKnown RBP5.04□□□□□ -1.6
VPS72-203ENST00000463470 SNRNP35Q16560 246 aaKnown RBP5.04□□□□□ -1.6
VPS72-203ENST00000463470 CYP1B1Q16678 543 aa5.04□□□□□ -1.6
VPS72-203ENST00000463470 TTC31Q49AM3 519 aaPredicted RBP5.04□□□□□ -1.6
VPS72-203ENST00000463470 ZC2HC1CQ53FD0 456 aaPredicted RBP5.04□□□□□ -1.6
VPS72-203ENST00000463470 ODF2Q5BJF6 829 aa5.04□□□□□ -1.6
VPS72-203ENST00000463470 XKR9Q5GH70 373 aa5.04□□□□□ -1.6
VPS72-203ENST00000463470 KIAA1755Q5JYT7 1200 aa5.04□□□□□ -1.6
VPS72-203ENST00000463470 ARHGEF16Q5VV41 709 aa5.04□□□□□ -1.6
VPS72-203ENST00000463470 DENND2CQ68D51 928 aa5.04□□□□□ -1.6
VPS72-203ENST00000463470 DUPD1Q68J44 220 aa5.04□□□□□ -1.6
VPS72-203ENST00000463470 MIS18BP1Q6P0N0 1132 aa5.04□□□□□ -1.6
VPS72-203ENST00000463470 TRMT10CQ7L0Y3 403 aaKnown RBP5.04□□□□□ -1.6
VPS72-203ENST00000463470 TMC3Q7Z5M5 1100 aa5.04□□□□□ -1.6
VPS72-203ENST00000463470 VSIG10LQ86VR7 867 aa5.04□□□□□ -1.6
VPS72-203ENST00000463470 APOBEC3FQ8IUX4 373 aaKnown RBP5.04□□□□□ -1.6
VPS72-203ENST00000463470 CCDC50Q8IVM0 306 aa5.04□□□□□ -1.6
VPS72-203ENST00000463470 CDAN1Q8IWY9 1227 aa5.04□□□□□ -1.6
VPS72-203ENST00000463470 ANKRD35Q8N283 1001 aa5.04□□□□□ -1.6
VPS72-203ENST00000463470 GPD1LQ8N335 351 aa5.04□□□□□ -1.6
VPS72-203ENST00000463470 OTUD6BQ8N6M0 293 aa5.04□□□□□ -1.6
VPS72-203ENST00000463470 ANKS4BQ8N8V4 417 aa5.04□□□□□ -1.6
VPS72-203ENST00000463470 C12orf50Q8NA57 414 aaPredicted RBP5.04□□□□□ -1.6
VPS72-203ENST00000463470 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.04□□□□□ -1.6
VPS72-203ENST00000463470 LMO3Q8TAP4 145 aa5.04□□□□□ -1.6
VPS72-203ENST00000463470 ACER1Q8TDN7 264 aa5.04□□□□□ -1.6
VPS72-203ENST00000463470 SYTL5Q8TDW5 730 aaPredicted RBP5.04□□□□□ -1.6
VPS72-203ENST00000463470 UBLCP1Q8WVY7 318 aaPredicted RBP5.04□□□□□ -1.6
VPS72-203ENST00000463470 CLEC4DQ8WXI8 215 aa5.04□□□□□ -1.6
VPS72-203ENST00000463470 SHC3Q92529 594 aa5.04□□□□□ -1.6
VPS72-203ENST00000463470 FAXDC2Q96IV6 333 aa5.04□□□□□ -1.6
VPS72-203ENST00000463470 CLMNQ96JQ2 1002 aa5.04□□□□□ -1.6
VPS72-203ENST00000463470 C12orf42Q96LP6 360 aa5.04□□□□□ -1.6
VPS72-203ENST00000463470 MFSD14AQ96MC6 490 aa5.04□□□□□ -1.6
VPS72-203ENST00000463470 FBXL18Q96ME1 805 aa5.04□□□□□ -1.6
VPS72-203ENST00000463470 RMDN3Q96TC7 470 aa5.04□□□□□ -1.6
VPS72-203ENST00000463470 P2RX7Q99572 595 aaKnown RBP5.04□□□□□ -1.6
VPS72-203ENST00000463470 ZSWIM1Q9BR11 485 aa5.04□□□□□ -1.6
VPS72-203ENST00000463470 CCDC77Q9BR77 488 aa5.04□□□□□ -1.6
VPS72-203ENST00000463470 TACO1Q9BSH4 297 aaKnown RBP5.04□□□□□ -1.6
VPS72-203ENST00000463470 ZNF341Q9BYN7 854 aa5.04□□□□□ -1.6
VPS72-203ENST00000463470 NSRP1Q9H0G5 558 aaKnown RBP5.04□□□□□ -1.6
VPS72-203ENST00000463470 PABPC3Q9H361 631 aaKnown RBP5.04□□□□□ -1.6
VPS72-203ENST00000463470 FAM124BQ9H5Z6 455 aaPredicted RBP5.04□□□□□ -1.6
VPS72-203ENST00000463470 ATP6V0A4Q9HBG4 840 aa5.04□□□□□ -1.6
VPS72-203ENST00000463470 VEZTQ9HBM0 779 aa5.04□□□□□ -1.6
VPS72-203ENST00000463470 KMT5AQ9NQR1 393 aa5.04□□□□□ -1.6
VPS72-203ENST00000463470 C1orf112Q9NSG2 853 aa5.04□□□□□ -1.6
VPS72-203ENST00000463470 SEPT11Q9NVA2 429 aaKnown RBP5.04□□□□□ -1.6
VPS72-203ENST00000463470 HOXC10Q9NYD6 342 aa5.04□□□□□ -1.6
VPS72-203ENST00000463470 WHRNQ9P202 907 aa5.04□□□□□ -1.6
VPS72-203ENST00000463470 FBXO40Q9UH90 709 aa5.04□□□□□ -1.6
VPS72-203ENST00000463470 TBX20Q9UMR3 447 aa5.04□□□□□ -1.6
VPS72-203ENST00000463470 PCDHB2Q9Y5E7 798 aa5.04□□□□□ -1.6
VPS72-203ENST00000463470 PCDHA3Q9Y5H8 950 aa5.04□□□□□ -1.6
VPS72-203ENST00000463470 ALG6Q9Y672 507 aa5.04□□□□□ -1.6
VPS72-203ENST00000463470 GMNCA6NCL1 334 aa5.03□□□□□ -1.6
VPS72-203ENST00000463470 SFI1A8K8P3 1242 aa5.03□□□□□ -1.6
VPS72-203ENST00000463470 SMAPO00193 183 aa5.03□□□□□ -1.6
VPS72-203ENST00000463470 DDX3YO15523 660 aaKnown RBP5.03□□□□□ -1.6
VPS72-203ENST00000463470 MEFVO15553 781 aaPredicted RBP5.03□□□□□ -1.6
VPS72-203ENST00000463470 DAPK3O43293 454 aa5.03□□□□□ -1.6
VPS72-203ENST00000463470 SPOPO43791 374 aa5.03□□□□□ -1.6
VPS72-203ENST00000463470 GAS2O43903 313 aaKnown RBP5.03□□□□□ -1.6
VPS72-203ENST00000463470 EXTL3O43909 919 aa5.03□□□□□ -1.6
VPS72-203ENST00000463470 ECEL1O95672 775 aa5.03□□□□□ -1.6
VPS72-203ENST00000463470 ALAS1P13196 640 aa5.03□□□□□ -1.6
VPS72-203ENST00000463470 CYP11B1P15538 503 aa5.03□□□□□ -1.6
VPS72-203ENST00000463470 VCAM1P19320 739 aa5.03□□□□□ -1.6
VPS72-203ENST00000463470 ERCC3P19447 782 aa5.03□□□□□ -1.6
VPS72-203ENST00000463470 CNGA1P29973 690 aa5.03□□□□□ -1.6
VPS72-203ENST00000463470 COPB2P35606 906 aa5.03□□□□□ -1.6
VPS72-203ENST00000463470 RFC5P40937 340 aa5.03□□□□□ -1.6
VPS72-203ENST00000463470 DNA2P51530 1060 aa5.03□□□□□ -1.6
VPS72-203ENST00000463470 GUCY2FP51841 1108 aa5.03□□□□□ -1.6
VPS72-203ENST00000463470 EFNA5P52803 228 aa5.03□□□□□ -1.6
VPS72-203ENST00000463470 PMS2P54278 862 aa5.03□□□□□ -1.6
VPS72-203ENST00000463470 GYS2P54840 703 aa5.03□□□□□ -1.6
VPS72-203ENST00000463470 YWHAEP62258 255 aaKnown RBP5.03□□□□□ -1.6
VPS72-203ENST00000463470 RPS6P62753 249 aaKnown RBP5.03□□□□□ -1.6
VPS72-203ENST00000463470 CLDN10P78369 228 aa5.03□□□□□ -1.6
VPS72-203ENST00000463470 CENPCQ03188 943 aa5.03□□□□□ -1.6
VPS72-203ENST00000463470 TAP1Q03518 808 aa5.03□□□□□ -1.6
VPS72-203ENST00000463470 KCNA1Q09470 495 aa5.03□□□□□ -1.6
VPS72-203ENST00000463470 SREBF2Q12772 1141 aa5.03□□□□□ -1.6
VPS72-203ENST00000463470 NR1H3Q13133 447 aa5.03□□□□□ -1.6
VPS72-203ENST00000463470 PRPF4BQ13523 1007 aaKnown RBP5.03□□□□□ -1.6
VPS72-203ENST00000463470 PGM5Q15124 567 aa5.03□□□□□ -1.6
VPS72-203ENST00000463470 PTGISQ16647 500 aa5.03□□□□□ -1.6
VPS72-203ENST00000463470 ARHGAP44Q17R89 818 aa5.03□□□□□ -1.6
VPS72-203ENST00000463470 KRT71Q3SY84 523 aa5.03□□□□□ -1.6
VPS72-203ENST00000463470 CBWD6Q4V339 395 aa5.03□□□□□ -1.6
VPS72-203ENST00000463470 TTMPQ5BVD1 217 aa5.03□□□□□ -1.6
VPS72-203ENST00000463470 XKR3Q5GH77 459 aa5.03□□□□□ -1.6
VPS72-203ENST00000463470 CBWD3Q5JTY5 395 aa5.03□□□□□ -1.6
VPS72-203ENST00000463470 CBWD5Q5RIA9 395 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms