RNA–Protein interactions for RNA: ENST00000463244.6

CPSF7-209, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-209ENST00000463244 MTMR9Q96QG7 549 aa22.94■■□□□ 1.26
CPSF7-209ENST00000463244 PDZD7Q9H5P4 517 aa22.94■■□□□ 1.26
CPSF7-209ENST00000463244 SNTG2Q9NY99 539 aa22.94■■□□□ 1.26
CPSF7-209ENST00000463244 POTEMA6NI47 508 aa22.93■■□□□ 1.26
CPSF7-209ENST00000463244 CCL16O15467 120 aa22.93■■□□□ 1.26
CPSF7-209ENST00000463244 ADAM12O43184 909 aa22.93■■□□□ 1.26
CPSF7-209ENST00000463244 THP07101 528 aa22.93■■□□□ 1.26
CPSF7-209ENST00000463244 ELAVL2Q12926 359 aaKnown RBP22.93■■□□□ 1.26
CPSF7-209ENST00000463244 MTSS1LQ765P7 747 aa22.93■■□□□ 1.26
CPSF7-209ENST00000463244 ZBTB8OSQ8IWT0 167 aa22.93■■□□□ 1.26
CPSF7-209ENST00000463244 MCPH1Q8NEM0 835 aa22.93■■□□□ 1.26
CPSF7-209ENST00000463244 DDX23Q9BUQ8 820 aaKnown RBP22.93■■□□□ 1.26
CPSF7-209ENST00000463244 COL4A3Q01955 1670 aa22.93■■□□□ 1.26
CPSF7-209ENST00000463244 TRIP11Q15643 1979 aa22.92■■□□□ 1.26
CPSF7-209ENST00000463244 PATJQ8NI35 1801 aa22.92■■□□□ 1.26
CPSF7-209ENST00000463244 KANSL1LA0AUZ9 987 aa22.92■■□□□ 1.26
CPSF7-209ENST00000463244 N4BP3O15049 544 aa22.92■■□□□ 1.26
CPSF7-209ENST00000463244 XYLBO75191 536 aa22.92■■□□□ 1.26
CPSF7-209ENST00000463244 LRRN2O75325 713 aa22.92■■□□□ 1.26
CPSF7-209ENST00000463244 RECQL4O94761 1208 aa22.92■■□□□ 1.26
CPSF7-209ENST00000463244 POU2F2P09086 479 aa22.92■■□□□ 1.26
CPSF7-209ENST00000463244 SPATA31C1P0DKV0 1188 aa22.92■■□□□ 1.26
CPSF7-209ENST00000463244 SNW1Q13573 536 aaKnown RBP22.92■■□□□ 1.26
CPSF7-209ENST00000463244 PDXDC1Q6P996 788 aa22.92■■□□□ 1.26
CPSF7-209ENST00000463244 MAML2Q8IZL2 1156 aaPredicted RBP22.92■■□□□ 1.26
CPSF7-209ENST00000463244 CXCL16Q9H2A7 254 aa22.92■■□□□ 1.26
CPSF7-209ENST00000463244 BTBD18B2RXH4 712 aa22.91■■□□□ 1.26
CPSF7-209ENST00000463244 ATP2B1P20020 1258 aa22.91■■□□□ 1.26
CPSF7-209ENST00000463244 ITFG1Q8TB96 612 aa22.91■■□□□ 1.26
CPSF7-209ENST00000463244 SLC7A14Q8TBB6 771 aa22.91■■□□□ 1.26
CPSF7-209ENST00000463244 RUBCNQ92622 972 aa22.91■■□□□ 1.26
CPSF7-209ENST00000463244 HINFPQ9BQA5 517 aa22.91■■□□□ 1.26
CPSF7-209ENST00000463244 C2orf40Q9H1Z8 148 aa22.91■■□□□ 1.26
CPSF7-209ENST00000463244 POLIQ9UNA4 740 aa22.91■■□□□ 1.26
CPSF7-209ENST00000463244 SPTBN2O15020 2390 aa22.91■■□□□ 1.26
CPSF7-209ENST00000463244 PRKCQQ04759 706 aa22.9■■□□□ 1.26
CPSF7-209ENST00000463244 PRPF4BQ13523 1007 aaKnown RBP22.9■■□□□ 1.26
CPSF7-209ENST00000463244 RAB33AQ14088 237 aa22.9■■□□□ 1.26
CPSF7-209ENST00000463244 MLF2Q15773 248 aaPredicted RBP22.9■■□□□ 1.26
CPSF7-209ENST00000463244 UVSSAQ2YD98 709 aa22.9■■□□□ 1.26
CPSF7-209ENST00000463244 AXDND1Q5T1B0 1012 aaPredicted RBP22.9■■□□□ 1.26
CPSF7-209ENST00000463244 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.9■■□□□ 1.26
CPSF7-209ENST00000463244 CATSPER3Q86XQ3 398 aa22.9■■□□□ 1.26
CPSF7-209ENST00000463244 NOSTRINQ8IVI9 506 aa22.9■■□□□ 1.26
CPSF7-209ENST00000463244 BSNDQ8WZ55 320 aa22.9■■□□□ 1.26
CPSF7-209ENST00000463244 TUFT1Q9NNX1 390 aa22.9■■□□□ 1.26
CPSF7-209ENST00000463244 MED24O75448 989 aa22.89■■□□□ 1.25
CPSF7-209ENST00000463244 PRKCBP05771 671 aa22.89■■□□□ 1.25
CPSF7-209ENST00000463244 ANKRD1Q15327 319 aa22.89■■□□□ 1.25
CPSF7-209ENST00000463244 MAPK6Q16659 721 aa22.89■■□□□ 1.25
CPSF7-209ENST00000463244 TMEM132AQ24JP5 1023 aa22.89■■□□□ 1.25
CPSF7-209ENST00000463244 SLC44A4Q53GD3 710 aa22.89■■□□□ 1.25
CPSF7-209ENST00000463244 DGLUCYQ7Z3D6 616 aa22.89■■□□□ 1.25
CPSF7-209ENST00000463244 DIS3L2Q8IYB7 885 aaKnown RBP22.89■■□□□ 1.25
CPSF7-209ENST00000463244 SUMF1Q8NBK3 374 aa22.89■■□□□ 1.25
CPSF7-209ENST00000463244 ADPGKQ9BRR6 497 aa22.89■■□□□ 1.25
CPSF7-209ENST00000463244 BCO2Q9BYV7 579 aa22.89■■□□□ 1.25
CPSF7-209ENST00000463244 CCDC113Q9H0I3 377 aa22.89■■□□□ 1.25
CPSF7-209ENST00000463244 TMEM60Q9H2L4 133 aa22.89■■□□□ 1.25
CPSF7-209ENST00000463244 TPRP12270 2363 aaKnown RBP22.89■■□□□ 1.25
CPSF7-209ENST00000463244 F5P12259 2224 aa22.88■■□□□ 1.25
CPSF7-209ENST00000463244 EPG5Q9HCE0 2579 aa22.88■■□□□ 1.25
CPSF7-209ENST00000463244 ACKR2O00590 384 aa22.88■■□□□ 1.25
CPSF7-209ENST00000463244 EDN1P05305 212 aa22.88■■□□□ 1.25
CPSF7-209ENST00000463244 FGFR3P22607 806 aa22.88■■□□□ 1.25
CPSF7-209ENST00000463244 OR1D2P34982 312 aa22.88■■□□□ 1.25
CPSF7-209ENST00000463244 RBM25P49756 843 aaKnown RBP22.88■■□□□ 1.25
CPSF7-209ENST00000463244 PFKPQ01813 784 aa22.88■■□□□ 1.25
CPSF7-209ENST00000463244 ZNF528Q3MIS6 628 aa22.88■■□□□ 1.25
CPSF7-209ENST00000463244 RTL10Q7L3V2 364 aa22.88■■□□□ 1.25
CPSF7-209ENST00000463244 NPAS3Q8IXF0 933 aa22.88■■□□□ 1.25
CPSF7-209ENST00000463244 DCLK2Q8N568 766 aa22.88■■□□□ 1.25
CPSF7-209ENST00000463244 NECAB1Q8N987 351 aa22.88■■□□□ 1.25
CPSF7-209ENST00000463244 GTF3C6Q969F1 213 aa22.88■■□□□ 1.25
CPSF7-209ENST00000463244 NACC1Q96RE7 527 aa22.88■■□□□ 1.25
CPSF7-209ENST00000463244 OSBPL6Q9BZF3 934 aa22.88■■□□□ 1.25
CPSF7-209ENST00000463244 HCFC1R1Q9NWW0 138 aa22.88■■□□□ 1.25
CPSF7-209ENST00000463244 DNMT3BQ9UBC3 853 aaKnown RBP22.88■■□□□ 1.25
CPSF7-209ENST00000463244 MTRRQ9UBK8 725 aa22.88■■□□□ 1.25
CPSF7-209ENST00000463244 KCNH3Q9ULD8 1083 aa22.88■■□□□ 1.25
CPSF7-209ENST00000463244 USP20Q9Y2K6 914 aa22.88■■□□□ 1.25
CPSF7-209ENST00000463244 MED19A0JLT2 244 aaPredicted RBP22.87■■□□□ 1.25
CPSF7-209ENST00000463244 TMEM189-UBE2V1I3L0A0 370 aa22.87■■□□□ 1.25
CPSF7-209ENST00000463244 KINO60870 393 aaKnown RBP22.87■■□□□ 1.25
CPSF7-209ENST00000463244 IGFBP6P24592 240 aaPredicted RBP22.87■■□□□ 1.25
CPSF7-209ENST00000463244 PUM1Q14671 1186 aaKnown RBP eCLIP22.87■■□□□ 1.25
CPSF7-209ENST00000463244 UBXN2BQ14CS0 331 aa22.87■■□□□ 1.25
CPSF7-209ENST00000463244 ME3Q16798 604 aa22.87■■□□□ 1.25
CPSF7-209ENST00000463244 PABPC1LQ4VXU2 614 aaKnown RBP22.87■■□□□ 1.25
CPSF7-209ENST00000463244 EEF1DP3Q658K8 133 aa22.87■■□□□ 1.25
CPSF7-209ENST00000463244 RSPO2Q6UXX9 243 aaPredicted RBP22.87■■□□□ 1.25
CPSF7-209ENST00000463244 NSUN7Q8NE18 718 aaKnown RBP22.87■■□□□ 1.25
CPSF7-209ENST00000463244 KXD1Q9BQD3 176 aa22.87■■□□□ 1.25
CPSF7-209ENST00000463244 POLR3CQ9BUI4 534 aaPredicted RBP22.87■■□□□ 1.25
CPSF7-209ENST00000463244 SPATA6Q9NWH7 488 aaPredicted RBP22.87■■□□□ 1.25
CPSF7-209ENST00000463244 FBXO4Q9UKT5 387 aa22.87■■□□□ 1.25
CPSF7-209ENST00000463244 GDAQ9Y2T3 454 aa22.87■■□□□ 1.25
CPSF7-209ENST00000463244 MTF2Q9Y483 593 aaPredicted RBP22.87■■□□□ 1.25
CPSF7-209ENST00000463244 LARGE1O95461 756 aa22.86■■□□□ 1.25
CPSF7-209ENST00000463244 NAMPTP43490 491 aa22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms