RNA–Protein interactions for RNA: ENST00000463007.5

HDAC4-208, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,158 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-208ENST00000463007 PHF2O75151 1096 aa13.3□□□□□ -0.28
HDAC4-208ENST00000463007 POLR2MP0CAP2 368 aa13.3□□□□□ -0.28
HDAC4-208ENST00000463007 GAP43P17677 238 aa13.3□□□□□ -0.28
HDAC4-208ENST00000463007 PDE6CP51160 858 aa13.3□□□□□ -0.28
HDAC4-208ENST00000463007 NCALDP61601 193 aa13.3□□□□□ -0.28
HDAC4-208ENST00000463007 FAM160B2Q86V87 743 aa13.3□□□□□ -0.28
HDAC4-208ENST00000463007 FITM2Q8N6M3 262 aa13.3□□□□□ -0.28
HDAC4-208ENST00000463007 CLEC4DQ8WXI8 215 aa13.3□□□□□ -0.28
HDAC4-208ENST00000463007 ZNF277Q9NRM2 450 aaPredicted RBP13.3□□□□□ -0.28
HDAC4-208ENST00000463007 KLHL11Q9NVR0 708 aa13.3□□□□□ -0.28
HDAC4-208ENST00000463007 USP15Q9Y4E8 981 aaPredicted RBP13.3□□□□□ -0.28
HDAC4-208ENST00000463007 GTPBP10A4D1E9 387 aaKnown RBP13.3□□□□□ -0.28
HDAC4-208ENST00000463007 WDR91A4D1P6 747 aa13.3□□□□□ -0.28
HDAC4-208ENST00000463007 ANKRD62A6NC57 917 aa13.3□□□□□ -0.28
HDAC4-208ENST00000463007 POC1B-GALNT4F8VUJ3 575 aa13.3□□□□□ -0.28
HDAC4-208ENST00000463007 SNX3O60493 162 aa13.3□□□□□ -0.28
HDAC4-208ENST00000463007 DNAJC8O75937 253 aaPredicted RBP13.3□□□□□ -0.28
HDAC4-208ENST00000463007 ADCY8P40145 1251 aa13.3□□□□□ -0.28
HDAC4-208ENST00000463007 PRELPP51888 382 aa13.3□□□□□ -0.28
HDAC4-208ENST00000463007 KRT17Q04695 432 aa13.3□□□□□ -0.28
HDAC4-208ENST00000463007 EN1Q05925 392 aaPredicted RBP13.3□□□□□ -0.28
HDAC4-208ENST00000463007 PPATQ06203 517 aa13.3□□□□□ -0.28
HDAC4-208ENST00000463007 ADCY2Q08462 1091 aa13.3□□□□□ -0.28
HDAC4-208ENST00000463007 MPP2Q14168 576 aa13.3□□□□□ -0.28
HDAC4-208ENST00000463007 SGO2Q562F6 1265 aa13.3□□□□□ -0.28
HDAC4-208ENST00000463007 TAOK1Q7L7X3 1001 aa13.3□□□□□ -0.28
HDAC4-208ENST00000463007 SLC47A2Q86VL8 602 aa13.3□□□□□ -0.28
HDAC4-208ENST00000463007 VSIG1Q86XK7 387 aa13.3□□□□□ -0.28
HDAC4-208ENST00000463007 CYP4X1Q8N118 509 aa13.3□□□□□ -0.28
HDAC4-208ENST00000463007 C1orf131Q8NDD1 294 aaKnown RBP13.3□□□□□ -0.28
HDAC4-208ENST00000463007 ZNF653Q96CK0 615 aa13.3□□□□□ -0.28
HDAC4-208ENST00000463007 TEPSINQ96N21 525 aa13.3□□□□□ -0.28
HDAC4-208ENST00000463007 NUP85Q9BW27 656 aa13.3□□□□□ -0.28
HDAC4-208ENST00000463007 TAOK3Q9H2K8 898 aa13.3□□□□□ -0.28
HDAC4-208ENST00000463007 UNC45AQ9H3U1 944 aa13.3□□□□□ -0.28
HDAC4-208ENST00000463007 FBXO28Q9NVF7 368 aa13.3□□□□□ -0.28
HDAC4-208ENST00000463007 DMAC2Q9NW81 257 aa13.3□□□□□ -0.28
HDAC4-208ENST00000463007 TMOD2Q9NZR1 351 aa13.3□□□□□ -0.28
HDAC4-208ENST00000463007 COL20A1Q9P218 1284 aa13.3□□□□□ -0.28
HDAC4-208ENST00000463007 GGA2Q9UJY4 613 aa13.3□□□□□ -0.28
HDAC4-208ENST00000463007 FEM1BQ9UK73 627 aa13.3□□□□□ -0.28
HDAC4-208ENST00000463007 USTQ9Y2C2 406 aa13.3□□□□□ -0.28
HDAC4-208ENST00000463007 UBE4BO95155 1302 aa13.29□□□□□ -0.28
HDAC4-208ENST00000463007 DHX15O43143 795 aaKnown RBP13.29□□□□□ -0.28
HDAC4-208ENST00000463007 SUN1O94901 812 aa13.29□□□□□ -0.28
HDAC4-208ENST00000463007 PAEPP09466 180 aa13.29□□□□□ -0.28
HDAC4-208ENST00000463007 ARP10275 920 aa13.29□□□□□ -0.28
HDAC4-208ENST00000463007 BCRP11274 1271 aa13.29□□□□□ -0.28
HDAC4-208ENST00000463007 MCCD1P59942 119 aaPredicted RBP13.29□□□□□ -0.28
HDAC4-208ENST00000463007 TMED2Q15363 201 aa13.29□□□□□ -0.28
HDAC4-208ENST00000463007 LACTB2Q53H82 288 aaPredicted RBP13.29□□□□□ -0.28
HDAC4-208ENST00000463007 LRCH2Q5VUJ6 765 aa13.29□□□□□ -0.28
HDAC4-208ENST00000463007 RNF207Q6ZRF8 634 aa13.29□□□□□ -0.28
HDAC4-208ENST00000463007 CHURC1Q8WUH1 139 aa13.29□□□□□ -0.28
HDAC4-208ENST00000463007 KIF9Q9HAQ2 790 aa13.29□□□□□ -0.28
HDAC4-208ENST00000463007 PARVGQ9HBI0 331 aa13.29□□□□□ -0.28
HDAC4-208ENST00000463007 HOMER3Q9NSC5 361 aa13.29□□□□□ -0.28
HDAC4-208ENST00000463007 TTC7AQ9ULT0 858 aaPredicted RBP13.29□□□□□ -0.28
HDAC4-208ENST00000463007 K7ENM7 598 aa13.29□□□□□ -0.28
HDAC4-208ENST00000463007 CES2O00748 559 aa13.29□□□□□ -0.28
HDAC4-208ENST00000463007 ITGB5P18084 799 aa13.29□□□□□ -0.28
HDAC4-208ENST00000463007 CCNHP51946 323 aaPredicted RBP13.29□□□□□ -0.28
HDAC4-208ENST00000463007 PIGWQ7Z7B1 504 aa13.29□□□□□ -0.28
HDAC4-208ENST00000463007 LDHDQ86WU2 507 aa13.29□□□□□ -0.28
HDAC4-208ENST00000463007 DAW1Q8N136 415 aa13.29□□□□□ -0.28
HDAC4-208ENST00000463007 DHX38Q92620 1227 aaKnown RBP13.29□□□□□ -0.28
HDAC4-208ENST00000463007 CHST7Q9NS84 486 aa13.29□□□□□ -0.28
HDAC4-208ENST00000463007 STK32BQ9NY57 414 aa13.29□□□□□ -0.28
HDAC4-208ENST00000463007 KCND2Q9NZV8 630 aa13.29□□□□□ -0.28
HDAC4-208ENST00000463007 KRT5P13647 590 aa13.28□□□□□ -0.28
HDAC4-208ENST00000463007 TARSP26639 723 aaKnown RBP13.28□□□□□ -0.28
HDAC4-208ENST00000463007 DNAJC3Q13217 504 aa13.28□□□□□ -0.28
HDAC4-208ENST00000463007 CBWD1Q9BRT8 395 aa13.28□□□□□ -0.28
HDAC4-208ENST00000463007 ATP6V0A4Q9HBG4 840 aa13.28□□□□□ -0.28
HDAC4-208ENST00000463007 MTUS1Q9ULD2 1270 aa13.28□□□□□ -0.28
HDAC4-208ENST00000463007 C15orf41Q9Y2V0 281 aa13.28□□□□□ -0.28
HDAC4-208ENST00000463007 MRPL11Q9Y3B7 192 aaKnown RBP13.28□□□□□ -0.28
HDAC4-208ENST00000463007 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.28□□□□□ -0.28
HDAC4-208ENST00000463007 ARID2Q68CP9 1835 aa13.28□□□□□ -0.28
HDAC4-208ENST00000463007 WNT10BO00744 389 aa13.28□□□□□ -0.28
HDAC4-208ENST00000463007 ECEL1O95672 775 aa13.28□□□□□ -0.28
HDAC4-208ENST00000463007 AGTP01019 485 aa13.28□□□□□ -0.28
HDAC4-208ENST00000463007 ICAM1P05362 532 aa13.28□□□□□ -0.28
HDAC4-208ENST00000463007 DPEP1P16444 411 aa13.28□□□□□ -0.28
HDAC4-208ENST00000463007 COILP38432 576 aaPredicted RBP13.28□□□□□ -0.28
HDAC4-208ENST00000463007 PTGIRP43119 386 aa13.28□□□□□ -0.28
HDAC4-208ENST00000463007 PGM2Q96G03 612 aa13.28□□□□□ -0.28
HDAC4-208ENST00000463007 PCDHB18PQ96TA0 734 aa13.28□□□□□ -0.28
HDAC4-208ENST00000463007 ZSWIM1Q9BR11 485 aa13.28□□□□□ -0.28
HDAC4-208ENST00000463007 SYT11Q9BT88 431 aa13.28□□□□□ -0.28
HDAC4-208ENST00000463007 AGPAT3Q9NRZ7 376 aa13.28□□□□□ -0.28
HDAC4-208ENST00000463007 ZNRF3Q9ULT6 936 aa13.28□□□□□ -0.28
HDAC4-208ENST00000463007 COL11A1P12107 1806 aaPredicted RBP13.28□□□□□ -0.28
HDAC4-208ENST00000463007 PPP3CAQ08209 521 aa13.28□□□□□ -0.28
HDAC4-208ENST00000463007 KAZNQ674X7 775 aa13.28□□□□□ -0.28
HDAC4-208ENST00000463007 GSTA5Q7RTV2 222 aa13.28□□□□□ -0.28
HDAC4-208ENST00000463007 SPATA21Q7Z572 469 aa13.28□□□□□ -0.28
HDAC4-208ENST00000463007 ZNF564Q8TBZ8 553 aaPredicted RBP13.28□□□□□ -0.28
HDAC4-208ENST00000463007 SAAL1Q96ER3 474 aa13.28□□□□□ -0.28
HDAC4-208ENST00000463007 RIT2Q99578 217 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms