RNA–Protein interactions for RNA: ENST00000462542.5

PCCB-203, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3

Gene PCCB, Length 488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-203ENST00000462542 CHRDQ9H2X0 955 aa12.94□□□□□ -0.34
PCCB-203ENST00000462542 KCNMB3Q9NPA1 279 aa12.94□□□□□ -0.34
PCCB-203ENST00000462542 AVENQ9NQS1 362 aaPredicted RBP12.94□□□□□ -0.34
PCCB-203ENST00000462542 HEBP1Q9NRV9 189 aa12.94□□□□□ -0.34
PCCB-203ENST00000462542 WRAP73Q9P2S5 460 aaPredicted RBP12.94□□□□□ -0.34
PCCB-203ENST00000462542 DNMT3BQ9UBC3 853 aaKnown RBP12.94□□□□□ -0.34
PCCB-203ENST00000462542 MAP1BP46821 2468 aaKnown RBP12.94□□□□□ -0.34
PCCB-203ENST00000462542 MARCH6O60337 910 aa12.93□□□□□ -0.34
PCCB-203ENST00000462542 NPTXRO95502 500 aa12.93□□□□□ -0.34
PCCB-203ENST00000462542 THP07101 528 aa12.93□□□□□ -0.34
PCCB-203ENST00000462542 TDGF1P13385 188 aa12.93□□□□□ -0.34
PCCB-203ENST00000462542 GCFC2P16383 781 aaKnown RBP12.93□□□□□ -0.34
PCCB-203ENST00000462542 PTPN2P17706 415 aa12.93□□□□□ -0.34
PCCB-203ENST00000462542 CNR2P34972 360 aa12.93□□□□□ -0.34
PCCB-203ENST00000462542 OR1D2P34982 312 aa12.93□□□□□ -0.34
PCCB-203ENST00000462542 CCR3P51677 355 aa12.93□□□□□ -0.34
PCCB-203ENST00000462542 SSRP1Q08945 709 aaKnown RBP12.93□□□□□ -0.34
PCCB-203ENST00000462542 CSRP2Q16527 193 aa12.93□□□□□ -0.34
PCCB-203ENST00000462542 BLOC1S2Q6QNY1 142 aa12.93□□□□□ -0.34
PCCB-203ENST00000462542 KRT25Q7Z3Z0 450 aa12.93□□□□□ -0.34
PCCB-203ENST00000462542 DAGLBQ8NCG7 672 aa12.93□□□□□ -0.34
PCCB-203ENST00000462542 RABGGTAQ92696 567 aa12.93□□□□□ -0.34
PCCB-203ENST00000462542 MCRS1Q96EZ8 462 aa12.93□□□□□ -0.34
PCCB-203ENST00000462542 NAP1L4Q99733 375 aaKnown RBP12.93□□□□□ -0.34
PCCB-203ENST00000462542 PAAF1Q9BRP4 392 aa12.93□□□□□ -0.34
PCCB-203ENST00000462542 LXNQ9BS40 222 aa12.93□□□□□ -0.34
PCCB-203ENST00000462542 AGXT2Q9BYV1 514 aa12.93□□□□□ -0.34
PCCB-203ENST00000462542 TRPV5Q9NQA5 729 aa12.93□□□□□ -0.34
PCCB-203ENST00000462542 BMP2KQ9NSY1 1161 aaPredicted RBP12.93□□□□□ -0.34
PCCB-203ENST00000462542 KLK14Q9P0G3 267 aa12.93□□□□□ -0.34
PCCB-203ENST00000462542 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.92□□□□□ -0.34
PCCB-203ENST00000462542 SLC37A4O43826 429 aa12.92□□□□□ -0.34
PCCB-203ENST00000462542 DGAT1O75907 488 aa12.92□□□□□ -0.34
PCCB-203ENST00000462542 MICAL2O94851 1124 aa12.92□□□□□ -0.34
PCCB-203ENST00000462542 DEXIO95424 95 aa12.92□□□□□ -0.34
PCCB-203ENST00000462542 CPA1P15085 419 aa12.92□□□□□ -0.34
PCCB-203ENST00000462542 PDIA3P30101 505 aaKnown RBP12.92□□□□□ -0.34
PCCB-203ENST00000462542 ARL2P36404 184 aa12.92□□□□□ -0.34
PCCB-203ENST00000462542 EVCP57679 992 aa12.92□□□□□ -0.34
PCCB-203ENST00000462542 SPIRE1Q08AE8 756 aa12.92□□□□□ -0.34
PCCB-203ENST00000462542 TANGO2Q6ICL3 276 aa12.92□□□□□ -0.34
PCCB-203ENST00000462542 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.92□□□□□ -0.34
PCCB-203ENST00000462542 ZNF687Q8N1G0 1237 aa12.92□□□□□ -0.34
PCCB-203ENST00000462542 KCNB2Q92953 911 aa12.92□□□□□ -0.34
PCCB-203ENST00000462542 IRF7Q92985 503 aa12.92□□□□□ -0.34
PCCB-203ENST00000462542 PRIMPOLQ96LW4 560 aa12.92□□□□□ -0.34
PCCB-203ENST00000462542 TRMT61BQ9BVS5 477 aaKnown RBP12.92□□□□□ -0.34
PCCB-203ENST00000462542 PLA2G2FQ9BZM2 168 aa12.92□□□□□ -0.34
PCCB-203ENST00000462542 BRD9Q9H8M2 597 aa12.92□□□□□ -0.34
PCCB-203ENST00000462542 LMAN1LQ9HAT1 526 aa12.92□□□□□ -0.34
PCCB-203ENST00000462542 SEMA4GQ9NTN9 838 aa12.92□□□□□ -0.34
PCCB-203ENST00000462542 ANKEF1Q9NU02 776 aa12.92□□□□□ -0.34
PCCB-203ENST00000462542 HCFC1R1Q9NWW0 138 aa12.92□□□□□ -0.34
PCCB-203ENST00000462542 RGL1Q9NZL6 768 aa12.92□□□□□ -0.34
PCCB-203ENST00000462542 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.92□□□□□ -0.34
PCCB-203ENST00000462542 ZNF197O14709 1029 aa12.91□□□□□ -0.34
PCCB-203ENST00000462542 ZBTB39O15060 712 aa12.91□□□□□ -0.34
PCCB-203ENST00000462542 ADAM12O43184 909 aa12.91□□□□□ -0.34
PCCB-203ENST00000462542 SLITRK3O94933 977 aa12.91□□□□□ -0.34
PCCB-203ENST00000462542 KIF4AO95239 1232 aa12.91□□□□□ -0.34
PCCB-203ENST00000462542 BAG4O95429 457 aaKnown RBP12.91□□□□□ -0.34
PCCB-203ENST00000462542 RHOP08100 348 aa12.91□□□□□ -0.34
PCCB-203ENST00000462542 FGFR3P22607 806 aa12.91□□□□□ -0.34
PCCB-203ENST00000462542 CXCL12P48061 93 aa12.91□□□□□ -0.34
PCCB-203ENST00000462542 CCT2P78371 535 aaKnown RBP12.91□□□□□ -0.34
PCCB-203ENST00000462542 CAPSQ13938 189 aa12.91□□□□□ -0.34
PCCB-203ENST00000462542 SIM2Q14190 667 aaPredicted RBP12.91□□□□□ -0.34
PCCB-203ENST00000462542 INF2Q27J81 1249 aa12.91□□□□□ -0.34
PCCB-203ENST00000462542 TPH2Q8IWU9 490 aa12.91□□□□□ -0.34
PCCB-203ENST00000462542 SLFN12Q8IYM2 578 aa12.91□□□□□ -0.34
PCCB-203ENST00000462542 HASPINQ8TF76 798 aa12.91□□□□□ -0.34
PCCB-203ENST00000462542 ING5Q8WYH8 240 aa12.91□□□□□ -0.34
PCCB-203ENST00000462542 DYDC2Q96IM9 177 aa12.91□□□□□ -0.34
PCCB-203ENST00000462542 JAKMIP1Q96N16 626 aaKnown RBP12.91□□□□□ -0.34
PCCB-203ENST00000462542 ZFP14Q9HCL3 533 aa12.91□□□□□ -0.34
PCCB-203ENST00000462542 XPNPEP1Q9NQW7 623 aa12.91□□□□□ -0.34
PCCB-203ENST00000462542 MTRRQ9UBK8 725 aa12.91□□□□□ -0.34
PCCB-203ENST00000462542 ANGPTL2Q9UKU9 493 aa12.91□□□□□ -0.34
PCCB-203ENST00000462542 BACE2Q9Y5Z0 518 aa12.91□□□□□ -0.34
PCCB-203ENST00000462542 NOTCH4Q99466 2003 aa12.91□□□□□ -0.34
PCCB-203ENST00000462542 COL4A3Q01955 1670 aa12.9□□□□□ -0.34
PCCB-203ENST00000462542 USP24Q9UPU5 2620 aa12.9□□□□□ -0.34
PCCB-203ENST00000462542 CACNA1GO43497 2377 aa12.9□□□□□ -0.34
PCCB-203ENST00000462542 CCDC194A0A1B0GVG4 234 aa12.9□□□□□ -0.34
PCCB-203ENST00000462542 CASTOR2A6NHX0 329 aa12.9□□□□□ -0.34
PCCB-203ENST00000462542 SHISA7A6NL88 538 aa12.9□□□□□ -0.34
PCCB-203ENST00000462542 B4GALT5O43286 388 aa12.9□□□□□ -0.34
PCCB-203ENST00000462542 TRAPPC3O43617 180 aa12.9□□□□□ -0.34
PCCB-203ENST00000462542 LYPLA2O95372 231 aa12.9□□□□□ -0.34
PCCB-203ENST00000462542 XRCC6P12956 609 aaKnown RBP eCLIP12.9□□□□□ -0.34
PCCB-203ENST00000462542 RPS6KB1P23443 525 aa12.9□□□□□ -0.34
PCCB-203ENST00000462542 ELF1P32519 619 aa12.9□□□□□ -0.34
PCCB-203ENST00000462542 MLLT6P55198 1093 aaPredicted RBP12.9□□□□□ -0.34
PCCB-203ENST00000462542 CTTNQ14247 550 aaKnown RBP12.9□□□□□ -0.34
PCCB-203ENST00000462542 LPAL2Q16609 132 aa12.9□□□□□ -0.34
PCCB-203ENST00000462542 BMP2KLQ5H9B9 411 aa12.9□□□□□ -0.34
PCCB-203ENST00000462542 PPP4R3CPQ6ZMV5 832 aa12.9□□□□□ -0.34
PCCB-203ENST00000462542 PRR23CQ6ZRP0 262 aa12.9□□□□□ -0.34
PCCB-203ENST00000462542 PRR23BQ6ZRT6 265 aa12.9□□□□□ -0.34
PCCB-203ENST00000462542 NEK8Q86SG6 692 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms