RNA–Protein interactions for RNA: ENST00000462306.5

ERCC3-206, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 963 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-206ENST00000462306 PAAF1Q9BRP4 392 aa17.32■□□□□ 0.36
ERCC3-206ENST00000462306 ZBP1Q9H171 429 aa17.32■□□□□ 0.36
ERCC3-206ENST00000462306 BLZF1Q9H2G9 400 aa17.32■□□□□ 0.36
ERCC3-206ENST00000462306 GOLPH3LQ9H4A5 285 aa17.32■□□□□ 0.36
ERCC3-206ENST00000462306 UBE2ZQ9H832 354 aaPredicted RBP17.32■□□□□ 0.36
ERCC3-206ENST00000462306 ENTPD7Q9NQZ7 604 aa17.32■□□□□ 0.36
ERCC3-206ENST00000462306 CACNG4Q9UBN1 327 aa17.32■□□□□ 0.36
ERCC3-206ENST00000462306 USP25Q9UHP3 1055 aa17.32■□□□□ 0.36
ERCC3-206ENST00000462306 PCDHB13Q9Y5F0 798 aa17.32■□□□□ 0.36
ERCC3-206ENST00000462306 BRWD1Q9NSI6 2320 aa17.32■□□□□ 0.36
ERCC3-206ENST00000462306 HIDE1A8MVS5 230 aa17.31■□□□□ 0.36
ERCC3-206ENST00000462306 NR1I2O75469 434 aa17.31■□□□□ 0.36
ERCC3-206ENST00000462306 ANP32AP39687 249 aaKnown RBP17.31■□□□□ 0.36
ERCC3-206ENST00000462306 MATR3P43243 847 aaKnown RBP eCLIP17.31■□□□□ 0.36
ERCC3-206ENST00000462306 SYKP43405 635 aa17.31■□□□□ 0.36
ERCC3-206ENST00000462306 CUL4BQ13620 913 aa17.31■□□□□ 0.36
ERCC3-206ENST00000462306 ALCAMQ13740 583 aa17.31■□□□□ 0.36
ERCC3-206ENST00000462306 SLC10A6Q3KNW5 377 aa17.31■□□□□ 0.36
ERCC3-206ENST00000462306 ZBTB41Q5SVQ8 909 aa17.31■□□□□ 0.36
ERCC3-206ENST00000462306 UNC13DQ70J99 1090 aa17.31■□□□□ 0.36
ERCC3-206ENST00000462306 RBM23Q86U06 439 aaKnown RBP17.31■□□□□ 0.36
ERCC3-206ENST00000462306 RNF168Q8IYW5 571 aaPredicted RBP17.31■□□□□ 0.36
ERCC3-206ENST00000462306 MRPL43Q8N983 215 aaKnown RBP17.31■□□□□ 0.36
ERCC3-206ENST00000462306 FSIP1Q8NA03 581 aa17.31■□□□□ 0.36
ERCC3-206ENST00000462306 GLIS3Q8NEA6 775 aa17.31■□□□□ 0.36
ERCC3-206ENST00000462306 ATXN2LQ8WWM7 1075 aaKnown RBP17.31■□□□□ 0.36
ERCC3-206ENST00000462306 RABGGTAQ92696 567 aa17.31■□□□□ 0.36
ERCC3-206ENST00000462306 PPP2R3CQ969Q6 453 aa17.31■□□□□ 0.36
ERCC3-206ENST00000462306 PABPC5Q96DU9 382 aaKnown RBP17.31■□□□□ 0.36
ERCC3-206ENST00000462306 ZMAT2Q96NC0 199 aaKnown RBP17.31■□□□□ 0.36
ERCC3-206ENST00000462306 ACCSQ96QU6 501 aa17.31■□□□□ 0.36
ERCC3-206ENST00000462306 COLEC11Q9BWP8 271 aa17.31■□□□□ 0.36
ERCC3-206ENST00000462306 IGFLR1Q9H665 355 aa17.31■□□□□ 0.36
ERCC3-206ENST00000462306 CNTN3Q9P232 1028 aa17.31■□□□□ 0.36
ERCC3-206ENST00000462306 SPTBN5Q9NRC6 3674 aaKnown RBP17.31■□□□□ 0.36
ERCC3-206ENST00000462306 UNC80Q8N2C7 3258 aa17.3■□□□□ 0.36
ERCC3-206ENST00000462306 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.3■□□□□ 0.36
ERCC3-206ENST00000462306 C2orf71A6NGG8 1288 aa17.3■□□□□ 0.36
ERCC3-206ENST00000462306 CASTOR2A6NHX0 329 aa17.3■□□□□ 0.36
ERCC3-206ENST00000462306 PER2O15055 1255 aa17.3■□□□□ 0.36
ERCC3-206ENST00000462306 OGTO15294 1046 aa17.3■□□□□ 0.36
ERCC3-206ENST00000462306 LINC01565O15544 149 aa17.3■□□□□ 0.36
ERCC3-206ENST00000462306 NCK2O43639 380 aa17.3■□□□□ 0.36
ERCC3-206ENST00000462306 CLTAP09496 248 aa17.3■□□□□ 0.36
ERCC3-206ENST00000462306 CTSAP10619 480 aa17.3■□□□□ 0.36
ERCC3-206ENST00000462306 KCNE1P15382 129 aa17.3■□□□□ 0.36
ERCC3-206ENST00000462306 ADSSP30520 456 aa17.3■□□□□ 0.36
ERCC3-206ENST00000462306 LTBRP36941 435 aa17.3■□□□□ 0.36
ERCC3-206ENST00000462306 TNFSF9P41273 254 aa17.3■□□□□ 0.36
ERCC3-206ENST00000462306 NRIP1P48552 1158 aa17.3■□□□□ 0.36
ERCC3-206ENST00000462306 ADAM15Q13444 863 aa17.3■□□□□ 0.36
ERCC3-206ENST00000462306 SMC1AQ14683 1233 aaKnown RBP17.3■□□□□ 0.36
ERCC3-206ENST00000462306 TPRNQ4KMQ1 711 aa17.3■□□□□ 0.36
ERCC3-206ENST00000462306 TLE6Q9H808 572 aa17.3■□□□□ 0.36
ERCC3-206ENST00000462306 STK39Q9UEW8 545 aa17.3■□□□□ 0.36
ERCC3-206ENST00000462306 IRAK3Q9Y616 596 aa17.3■□□□□ 0.36
ERCC3-206ENST00000462306 TRIP11Q15643 1979 aa17.29■□□□□ 0.36
ERCC3-206ENST00000462306 PVALEFA0A1B0GWK0 134 aa17.29■□□□□ 0.36
ERCC3-206ENST00000462306 TTC26A0AVF1 554 aa17.29■□□□□ 0.36
ERCC3-206ENST00000462306 PRPF6O94906 941 aaKnown RBP17.29■□□□□ 0.36
ERCC3-206ENST00000462306 CXCL14O95715 111 aa17.29■□□□□ 0.36
ERCC3-206ENST00000462306 SOD2P04179 222 aa17.29■□□□□ 0.36
ERCC3-206ENST00000462306 CXCL8P10145 99 aa17.29■□□□□ 0.36
ERCC3-206ENST00000462306 MRPS5P82675 430 aaKnown RBP17.29■□□□□ 0.36
ERCC3-206ENST00000462306 SOX4Q06945 474 aaPredicted RBP17.29■□□□□ 0.36
ERCC3-206ENST00000462306 HSP90AA2PQ14568 343 aaPredicted RBP17.29■□□□□ 0.36
ERCC3-206ENST00000462306 KYAT1Q16773 422 aa17.29■□□□□ 0.36
ERCC3-206ENST00000462306 DUSP6Q16828 381 aa17.29■□□□□ 0.36
ERCC3-206ENST00000462306 FAM26FQ5R3K3 315 aa17.29■□□□□ 0.36
ERCC3-206ENST00000462306 SLFN12LQ6IEE8 588 aa17.29■□□□□ 0.36
ERCC3-206ENST00000462306 EPM2AIP1Q7L775 607 aaPredicted RBP17.29■□□□□ 0.36
ERCC3-206ENST00000462306 TAS1R1Q7RTX1 841 aa17.29■□□□□ 0.36
ERCC3-206ENST00000462306 EFHBQ8N7U6 833 aa17.29■□□□□ 0.36
ERCC3-206ENST00000462306 AUTS2Q8WXX7 1259 aa17.29■□□□□ 0.36
ERCC3-206ENST00000462306 ASB2Q96Q27 587 aa17.29■□□□□ 0.36
ERCC3-206ENST00000462306 MSTO1Q9BUK6 570 aa17.29■□□□□ 0.36
ERCC3-206ENST00000462306 GPR62Q9BZJ7 368 aa17.29■□□□□ 0.36
ERCC3-206ENST00000462306 PLEKHA5Q9HAU0 1116 aa17.29■□□□□ 0.36
ERCC3-206ENST00000462306 CLDND1Q9NY35 253 aa17.29■□□□□ 0.36
ERCC3-206ENST00000462306 CPSF3Q9UKF6 684 aaKnown RBP17.29■□□□□ 0.36
ERCC3-206ENST00000462306 ADAM28Q9UKQ2 775 aa17.29■□□□□ 0.36
ERCC3-206ENST00000462306 EXOC7Q9UPT5 735 aa17.29■□□□□ 0.36
ERCC3-206ENST00000462306 KLRC4O43908 158 aa17.28■□□□□ 0.36
ERCC3-206ENST00000462306 LILRB3O75022 631 aa17.28■□□□□ 0.36
ERCC3-206ENST00000462306 KIF4AO95239 1232 aa17.28■□□□□ 0.36
ERCC3-206ENST00000462306 GLP2RO95838 553 aa17.28■□□□□ 0.36
ERCC3-206ENST00000462306 ADRB2P07550 413 aa17.28■□□□□ 0.36
ERCC3-206ENST00000462306 KCNA5P22460 613 aa17.28■□□□□ 0.36
ERCC3-206ENST00000462306 HOXD13P35453 343 aa17.28■□□□□ 0.36
ERCC3-206ENST00000462306 DLX2Q07687 328 aaPredicted RBP17.28■□□□□ 0.36
ERCC3-206ENST00000462306 KCNC3Q14003 757 aa17.28■□□□□ 0.36
ERCC3-206ENST00000462306 PTPN14Q15678 1187 aa17.28■□□□□ 0.36
ERCC3-206ENST00000462306 ENOX2Q16206 610 aaKnown RBP17.28■□□□□ 0.36
ERCC3-206ENST00000462306 FUT10Q6P4F1 479 aa17.28■□□□□ 0.36
ERCC3-206ENST00000462306 VN1R2Q8NFZ6 395 aa17.28■□□□□ 0.36
ERCC3-206ENST00000462306 CDCA3Q99618 268 aaPredicted RBP17.28■□□□□ 0.36
ERCC3-206ENST00000462306 HERC2P3Q9BVR0 1158 aa17.28■□□□□ 0.36
ERCC3-206ENST00000462306 GOLGA2P5Q9HBQ8 144 aa17.28■□□□□ 0.36
ERCC3-206ENST00000462306 SLC38A7Q9NVC3 462 aa17.28■□□□□ 0.36
ERCC3-206ENST00000462306 AGO2Q9UKV8 859 aaKnown RBP17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms