RNA–Protein interactions for RNA: ENST00000462289.1

VPS36-202, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-202ENST00000462289 STBD1O95210 358 aa6.48□□□□□ -1.37
VPS36-202ENST00000462289 LGALS2P05162 132 aa6.48□□□□□ -1.37
VPS36-202ENST00000462289 C6orf222P0C671 652 aaPredicted RBP6.48□□□□□ -1.37
VPS36-202ENST00000462289 PDCP20941 246 aa6.48□□□□□ -1.37
VPS36-202ENST00000462289 SYT1P21579 422 aa6.48□□□□□ -1.37
VPS36-202ENST00000462289 CNGA1P29973 690 aa6.48□□□□□ -1.37
VPS36-202ENST00000462289 SLC26A2P50443 739 aa6.48□□□□□ -1.37
VPS36-202ENST00000462289 BEX3Q00994 111 aa6.48□□□□□ -1.37
VPS36-202ENST00000462289 DGKDQ16760 1214 aa6.48□□□□□ -1.37
VPS36-202ENST00000462289 CXCL17Q6UXB2 119 aa6.48□□□□□ -1.37
VPS36-202ENST00000462289 DTHD1Q6ZMT9 781 aa6.48□□□□□ -1.37
VPS36-202ENST00000462289 PLPPR4Q7Z2D5 763 aa6.48□□□□□ -1.37
VPS36-202ENST00000462289 TMC7Q7Z402 723 aa6.48□□□□□ -1.37
VPS36-202ENST00000462289 RPAINQ86UA6 219 aa6.48□□□□□ -1.37
VPS36-202ENST00000462289 PLA2G4DQ86XP0 818 aa6.48□□□□□ -1.37
VPS36-202ENST00000462289 SMAP1Q8IYB5 467 aaPredicted RBP6.48□□□□□ -1.37
VPS36-202ENST00000462289 SMYD4Q8IYR2 804 aaPredicted RBP6.48□□□□□ -1.37
VPS36-202ENST00000462289 OR6J1Q8NGC5 347 aa6.48□□□□□ -1.37
VPS36-202ENST00000462289 ASIC4Q96FT7 647 aa6.48□□□□□ -1.37
VPS36-202ENST00000462289 CEP89Q96ST8 783 aa6.48□□□□□ -1.37
VPS36-202ENST00000462289 NAP1L4Q99733 375 aaKnown RBP6.48□□□□□ -1.37
VPS36-202ENST00000462289 MTG1Q9BT17 334 aaPredicted RBP6.48□□□□□ -1.37
VPS36-202ENST00000462289 AP5M1Q9H0R1 490 aa6.48□□□□□ -1.37
VPS36-202ENST00000462289 SPC25Q9HBM1 224 aa6.48□□□□□ -1.37
VPS36-202ENST00000462289 RTEL1Q9NZ71 1219 aa6.48□□□□□ -1.37
VPS36-202ENST00000462289 MTMR6Q9Y217 621 aa6.48□□□□□ -1.37
VPS36-202ENST00000462289 SZT2Q5T011 3432 aa6.48□□□□□ -1.37
VPS36-202ENST00000462289 A0A0U1RQG5 324 aaPredicted RBP6.47□□□□□ -1.37
VPS36-202ENST00000462289 CCDC194A0A1B0GVG4 234 aa6.47□□□□□ -1.37
VPS36-202ENST00000462289 ZEB2O60315 1214 aa6.47□□□□□ -1.37
VPS36-202ENST00000462289 LYPLA2O95372 231 aa6.47□□□□□ -1.37
VPS36-202ENST00000462289 FAM87AP0C7U9 286 aa6.47□□□□□ -1.37
VPS36-202ENST00000462289 PRPHP41219 470 aa6.47□□□□□ -1.37
VPS36-202ENST00000462289 ACTR2P61160 394 aa6.47□□□□□ -1.37
VPS36-202ENST00000462289 PPP2R3AQ06190 1150 aa6.47□□□□□ -1.37
VPS36-202ENST00000462289 RESTQ13127 1097 aa6.47□□□□□ -1.37
VPS36-202ENST00000462289 DSC3Q14574 896 aa6.47□□□□□ -1.37
VPS36-202ENST00000462289 TARBP2Q15633 366 aaKnown RBP6.47□□□□□ -1.37
VPS36-202ENST00000462289 TRIM71Q2Q1W2 868 aaKnown RBP6.47□□□□□ -1.37
VPS36-202ENST00000462289 PRR16Q569H4 304 aa6.47□□□□□ -1.37
VPS36-202ENST00000462289 OGFOD2Q6N063 350 aa6.47□□□□□ -1.37
VPS36-202ENST00000462289 PIK3AP1Q6ZUJ8 805 aa6.47□□□□□ -1.37
VPS36-202ENST00000462289 CYFIP1Q7L576 1253 aa6.47□□□□□ -1.37
VPS36-202ENST00000462289 BRAPQ7Z569 592 aa6.47□□□□□ -1.37
VPS36-202ENST00000462289 DHX37Q8IY37 1157 aaKnown RBP6.47□□□□□ -1.37
VPS36-202ENST00000462289 LINC01465Q8N7H1 131 aa6.47□□□□□ -1.37
VPS36-202ENST00000462289 IGSF22Q8N9C0 903 aa6.47□□□□□ -1.37
VPS36-202ENST00000462289 SEPT1Q8WYJ6 367 aa6.47□□□□□ -1.37
VPS36-202ENST00000462289 GLT1D1Q96MS3 346 aa6.47□□□□□ -1.37
VPS36-202ENST00000462289 SPATA33Q96N06 139 aa6.47□□□□□ -1.37
VPS36-202ENST00000462289 HSD17B14Q9BPX1 270 aa6.47□□□□□ -1.37
VPS36-202ENST00000462289 TMEM60Q9H2L4 133 aa6.47□□□□□ -1.37
VPS36-202ENST00000462289 PIDD1Q9HB75 910 aa6.47□□□□□ -1.37
VPS36-202ENST00000462289 BRMS1Q9HCU9 246 aa6.47□□□□□ -1.37
VPS36-202ENST00000462289 CACNA2D2Q9NY47 1150 aa6.47□□□□□ -1.37
VPS36-202ENST00000462289 SLC9A2Q9UBY0 812 aa6.47□□□□□ -1.37
VPS36-202ENST00000462289 DDX25Q9UHL0 483 aaKnown RBP6.47□□□□□ -1.37
VPS36-202ENST00000462289 GTF2IRD1Q9UHL9 959 aa6.47□□□□□ -1.37
VPS36-202ENST00000462289 SMC3Q9UQE7 1217 aa6.47□□□□□ -1.37
VPS36-202ENST00000462289 CDH23Q9H251 3354 aa6.47□□□□□ -1.37
VPS36-202ENST00000462289 MROH7Q68CQ1 1323 aa6.47□□□□□ -1.37
VPS36-202ENST00000462289 TTC3P53804 2025 aa6.47□□□□□ -1.37
VPS36-202ENST00000462289 CHD9Q3L8U1 2897 aa6.47□□□□□ -1.37
VPS36-202ENST00000462289 MYH11P35749 1972 aa6.46□□□□□ -1.37
VPS36-202ENST00000462289 LAD1O00515 517 aa6.46□□□□□ -1.38
VPS36-202ENST00000462289 SUPT20HL2P0C7V6 817 aa6.46□□□□□ -1.38
VPS36-202ENST00000462289 SFNP31947 248 aa6.46□□□□□ -1.38
VPS36-202ENST00000462289 TCF7P36402 384 aaPredicted RBP6.46□□□□□ -1.38
VPS36-202ENST00000462289 RTP1P59025 263 aa6.46□□□□□ -1.38
VPS36-202ENST00000462289 ATP2C1P98194 919 aaPredicted RBP6.46□□□□□ -1.38
VPS36-202ENST00000462289 TLE2Q04725 743 aa6.46□□□□□ -1.38
VPS36-202ENST00000462289 CDK5R2Q13319 367 aa6.46□□□□□ -1.38
VPS36-202ENST00000462289 ITGA7Q13683 1181 aa6.46□□□□□ -1.38
VPS36-202ENST00000462289 TRIM29Q14134 588 aa6.46□□□□□ -1.38
VPS36-202ENST00000462289 PTPAQ15257 358 aa6.46□□□□□ -1.38
VPS36-202ENST00000462289 SAFBQ15424 915 aaKnown RBP eCLIP6.46□□□□□ -1.38
VPS36-202ENST00000462289 BRDTQ58F21 947 aaPredicted RBP6.46□□□□□ -1.38
VPS36-202ENST00000462289 RILPL1Q5EBL4 403 aa6.46□□□□□ -1.38
VPS36-202ENST00000462289 MARCH8Q5T0T0 291 aa6.46□□□□□ -1.38
VPS36-202ENST00000462289 ARL6IP4Q66PJ3 421 aaKnown RBP6.46□□□□□ -1.38
VPS36-202ENST00000462289 ZNF574Q6ZN55 896 aaPredicted RBP6.46□□□□□ -1.38
VPS36-202ENST00000462289 SPRED2Q7Z698 418 aa6.46□□□□□ -1.38
VPS36-202ENST00000462289 SERINC5Q86VE9 423 aa6.46□□□□□ -1.38
VPS36-202ENST00000462289 CCDC60Q8IWA6 550 aaPredicted RBP6.46□□□□□ -1.38
VPS36-202ENST00000462289 SLFN12Q8IYM2 578 aa6.46□□□□□ -1.38
VPS36-202ENST00000462289 POU5F2Q8N7G0 328 aa6.46□□□□□ -1.38
VPS36-202ENST00000462289 FAM184AQ8NB25 1140 aa6.46□□□□□ -1.38
VPS36-202ENST00000462289 NETO1Q8TDF5 533 aa6.46□□□□□ -1.38
VPS36-202ENST00000462289 DHX38Q92620 1227 aaKnown RBP6.46□□□□□ -1.38
VPS36-202ENST00000462289 ZNF577Q9BSK1 485 aa6.46□□□□□ -1.38
VPS36-202ENST00000462289 HTATIP2Q9BUP3 242 aa6.46□□□□□ -1.38
VPS36-202ENST00000462289 KATNAL1Q9BW62 490 aa6.46□□□□□ -1.38
VPS36-202ENST00000462289 BCO2Q9BYV7 579 aa6.46□□□□□ -1.38
VPS36-202ENST00000462289 SENP6Q9GZR1 1112 aaPredicted RBP6.46□□□□□ -1.38
VPS36-202ENST00000462289 UNC45AQ9H3U1 944 aa6.46□□□□□ -1.38
VPS36-202ENST00000462289 STARD7Q9NQZ5 370 aa6.46□□□□□ -1.38
VPS36-202ENST00000462289 PDLIM7Q9NR12 457 aa6.46□□□□□ -1.38
VPS36-202ENST00000462289 GPN3Q9UHW5 284 aaPredicted RBP6.46□□□□□ -1.38
VPS36-202ENST00000462289 ZDHHC9Q9Y397 364 aa6.46□□□□□ -1.38
VPS36-202ENST00000462289 COL4A6Q14031 1691 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms