RNA–Protein interactions for RNA: ENST00000462254.1

CSMD3-205, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 2

Gene CSMD3, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-205ENST00000462254 APPP05067 770 aa5.35□□□□□ -1.55
CSMD3-205ENST00000462254 SYPP08247 313 aa5.35□□□□□ -1.55
CSMD3-205ENST00000462254 SETSIPP0DME0 302 aa5.35□□□□□ -1.55
CSMD3-205ENST00000462254 TAL1P17542 331 aaPredicted RBP5.35□□□□□ -1.55
CSMD3-205ENST00000462254 GNAT2P19087 354 aa5.35□□□□□ -1.55
CSMD3-205ENST00000462254 COPB2P35606 906 aa5.35□□□□□ -1.55
CSMD3-205ENST00000462254 DDIT3P35638 169 aa5.35□□□□□ -1.55
CSMD3-205ENST00000462254 GMPSP49915 693 aaPredicted RBP5.35□□□□□ -1.55
CSMD3-205ENST00000462254 HK2P52789 917 aa5.35□□□□□ -1.55
CSMD3-205ENST00000462254 GEMIN4P57678 1058 aaKnown RBP5.35□□□□□ -1.55
CSMD3-205ENST00000462254 ERVFC1P60507 584 aa5.35□□□□□ -1.55
CSMD3-205ENST00000462254 HAND2P61296 217 aa5.35□□□□□ -1.55
CSMD3-205ENST00000462254 ADCY1Q08828 1119 aa5.35□□□□□ -1.55
CSMD3-205ENST00000462254 KLF1Q13351 362 aaPredicted RBP5.35□□□□□ -1.55
CSMD3-205ENST00000462254 BIRC3Q13489 604 aa5.35□□□□□ -1.55
CSMD3-205ENST00000462254 SART3Q15020 963 aaKnown RBP5.35□□□□□ -1.55
CSMD3-205ENST00000462254 TNIP1Q15025 636 aa5.35□□□□□ -1.55
CSMD3-205ENST00000462254 PIK3R6Q5UE93 754 aa5.35□□□□□ -1.55
CSMD3-205ENST00000462254 HEATR6Q6AI08 1181 aaKnown RBP5.35□□□□□ -1.55
CSMD3-205ENST00000462254 APOBEC3HQ6NTF7 200 aaKnown RBP5.35□□□□□ -1.55
CSMD3-205ENST00000462254 ZCCHC8Q6NZY4 707 aaKnown RBP5.35□□□□□ -1.55
CSMD3-205ENST00000462254 CDC42EP5Q6NZY7 148 aa5.35□□□□□ -1.55
CSMD3-205ENST00000462254 CRTC3Q6UUV7 619 aa5.35□□□□□ -1.55
CSMD3-205ENST00000462254 ZPBP2Q6X784 338 aa5.35□□□□□ -1.55
CSMD3-205ENST00000462254 CHST15Q7LFX5 561 aaPredicted RBP5.35□□□□□ -1.55
CSMD3-205ENST00000462254 MAMDC2Q7Z304 686 aaPredicted RBP5.35□□□□□ -1.55
CSMD3-205ENST00000462254 TBC1D10CQ8IV04 446 aa5.35□□□□□ -1.55
CSMD3-205ENST00000462254 DRC7Q8IY82 874 aa5.35□□□□□ -1.55
CSMD3-205ENST00000462254 FAM186BQ8IYM0 893 aa5.35□□□□□ -1.55
CSMD3-205ENST00000462254 CMTR2Q8IYT2 770 aaKnown RBP5.35□□□□□ -1.55
CSMD3-205ENST00000462254 NKAPQ8N5F7 415 aaKnown RBP5.35□□□□□ -1.55
CSMD3-205ENST00000462254 TGFBRAP1Q8WUH2 860 aa5.35□□□□□ -1.55
CSMD3-205ENST00000462254 SNRNP27Q8WVK2 155 aaKnown RBP5.35□□□□□ -1.55
CSMD3-205ENST00000462254 ZBED3Q96IU2 234 aaPredicted RBP5.35□□□□□ -1.55
CSMD3-205ENST00000462254 WNK4Q96J92 1243 aa5.35□□□□□ -1.55
CSMD3-205ENST00000462254 ZDHHC15Q96MV8 337 aa5.35□□□□□ -1.55
CSMD3-205ENST00000462254 NOL10Q9BSC4 688 aaKnown RBP5.35□□□□□ -1.55
CSMD3-205ENST00000462254 MRIQ9BWK5 157 aa5.35□□□□□ -1.55
CSMD3-205ENST00000462254 CRNKL1Q9BZJ0 848 aaKnown RBP5.35□□□□□ -1.55
CSMD3-205ENST00000462254 KLHL25Q9H0H3 589 aa5.35□□□□□ -1.55
CSMD3-205ENST00000462254 NAPBQ9H115 298 aa5.35□□□□□ -1.55
CSMD3-205ENST00000462254 DDX4Q9NQI0 724 aaKnown RBP5.35□□□□□ -1.55
CSMD3-205ENST00000462254 C1orf112Q9NSG2 853 aa5.35□□□□□ -1.55
CSMD3-205ENST00000462254 TCFL5Q9UL49 500 aa5.35□□□□□ -1.55
CSMD3-205ENST00000462254 CTNND2Q9UQB3 1225 aa5.35□□□□□ -1.55
CSMD3-205ENST00000462254 DMTF1Q9Y222 760 aa5.35□□□□□ -1.55
CSMD3-205ENST00000462254 PTPN22Q9Y2R2 807 aa5.35□□□□□ -1.55
CSMD3-205ENST00000462254 ZNF281Q9Y2X9 895 aa5.35□□□□□ -1.55
CSMD3-205ENST00000462254 MORC2Q9Y6X9 1032 aaPredicted RBP5.35□□□□□ -1.55
CSMD3-205ENST00000462254 COL2A1P02458 1487 aaPredicted RBP5.34□□□□□ -1.55
CSMD3-205ENST00000462254 ROBO3Q96MS0 1386 aa5.34□□□□□ -1.55
CSMD3-205ENST00000462254 FLT1P17948 1338 aa5.34□□□□□ -1.55
CSMD3-205ENST00000462254 NEDD4P46934 1319 aa5.34□□□□□ -1.55
CSMD3-205ENST00000462254 BAZ2BQ9UIF8 2168 aaKnown RBP5.34□□□□□ -1.55
CSMD3-205ENST00000462254 E7EWF7 191 aa5.34□□□□□ -1.55
CSMD3-205ENST00000462254 H0Y8X5 98 aa5.34□□□□□ -1.55
CSMD3-205ENST00000462254 ULK1O75385 1050 aa5.34□□□□□ -1.55
CSMD3-205ENST00000462254 RNASEH2AO75792 299 aaKnown RBP5.34□□□□□ -1.55
CSMD3-205ENST00000462254 DDNO94850 711 aaPredicted RBP5.34□□□□□ -1.55
CSMD3-205ENST00000462254 FKBP9O95302 570 aa5.34□□□□□ -1.55
CSMD3-205ENST00000462254 BAG3O95817 575 aa5.34□□□□□ -1.55
CSMD3-205ENST00000462254 MT-CO1P00395 513 aa5.34□□□□□ -1.55
CSMD3-205ENST00000462254 CFBP00751 764 aa5.34□□□□□ -1.55
CSMD3-205ENST00000462254 CYP2D6P10635 497 aa5.34□□□□□ -1.55
CSMD3-205ENST00000462254 CPA1P15085 419 aa5.34□□□□□ -1.55
CSMD3-205ENST00000462254 MCCP23508 829 aa5.34□□□□□ -1.55
CSMD3-205ENST00000462254 RPS12P25398 132 aaKnown RBP5.34□□□□□ -1.55
CSMD3-205ENST00000462254 ADCYAP1R1P41586 468 aa5.34□□□□□ -1.55
CSMD3-205ENST00000462254 CCT5P48643 541 aa5.34□□□□□ -1.55
CSMD3-205ENST00000462254 TDO2P48775 406 aa5.34□□□□□ -1.55
CSMD3-205ENST00000462254 RBM5P52756 815 aaKnown RBP eCLIP5.34□□□□□ -1.55
CSMD3-205ENST00000462254 CACNB3P54284 484 aa5.34□□□□□ -1.55
CSMD3-205ENST00000462254 PCBP3P57721 371 aaKnown RBP5.34□□□□□ -1.55
CSMD3-205ENST00000462254 IL2P60568 153 aa5.34□□□□□ -1.55
CSMD3-205ENST00000462254 RBM10P98175 930 aaKnown RBP5.34□□□□□ -1.55
CSMD3-205ENST00000462254 DSG1Q02413 1049 aa5.34□□□□□ -1.55
CSMD3-205ENST00000462254 SLC9A5Q14940 896 aa5.34□□□□□ -1.55
CSMD3-205ENST00000462254 IMMTQ16891 758 aaKnown RBP5.34□□□□□ -1.55
CSMD3-205ENST00000462254 SLC4A8Q2Y0W8 1093 aa5.34□□□□□ -1.55
CSMD3-205ENST00000462254 NOL9Q5SY16 702 aaKnown RBP5.34□□□□□ -1.55
CSMD3-205ENST00000462254 HYIQ5T013 277 aa5.34□□□□□ -1.55
CSMD3-205ENST00000462254 FYB2Q5VWT5 728 aa5.34□□□□□ -1.55
CSMD3-205ENST00000462254 ICE2Q659A1 982 aa5.34□□□□□ -1.55
CSMD3-205ENST00000462254 CTR9Q6PD62 1173 aa5.34□□□□□ -1.55
CSMD3-205ENST00000462254 FKBP9P1Q75LS8 142 aa5.34□□□□□ -1.55
CSMD3-205ENST00000462254 SRLQ86TD4 932 aa5.34□□□□□ -1.55
CSMD3-205ENST00000462254 MAPKAPK5Q8IW41 473 aa5.34□□□□□ -1.55
CSMD3-205ENST00000462254 TEX11Q8IYF3 940 aa5.34□□□□□ -1.55
CSMD3-205ENST00000462254 FIBCD1Q8N539 461 aa5.34□□□□□ -1.55
CSMD3-205ENST00000462254 SMC1BQ8NDV3 1235 aa5.34□□□□□ -1.55
CSMD3-205ENST00000462254 C1orf162Q8NEQ5 155 aaPredicted RBP5.34□□□□□ -1.55
CSMD3-205ENST00000462254 ADCY4Q8NFM4 1077 aa5.34□□□□□ -1.55
CSMD3-205ENST00000462254 DPF2Q92785 391 aa5.34□□□□□ -1.55
CSMD3-205ENST00000462254 PPP1R14AQ96A00 147 aa5.34□□□□□ -1.55
CSMD3-205ENST00000462254 HSPBAP1Q96EW2 488 aa5.34□□□□□ -1.55
CSMD3-205ENST00000462254 MPP4Q96JB8 637 aa5.34□□□□□ -1.55
CSMD3-205ENST00000462254 PRMT6Q96LA8 375 aaPredicted RBP5.34□□□□□ -1.55
CSMD3-205ENST00000462254 UPF3BQ9BZI7 483 aaKnown RBP5.34□□□□□ -1.55
CSMD3-205ENST00000462254 CSRNP2Q9H175 543 aa5.34□□□□□ -1.55
CSMD3-205ENST00000462254 NOL6Q9H6R4 1146 aaKnown RBP5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms