RNA–Protein interactions for RNA: ENST00000462198.5

SMARCC1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 785 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-204ENST00000462198 CTDNEP1O95476 244 aa6.68□□□□□ -1.34
SMARCC1-204ENST00000462198 TGFB3P10600 412 aa6.68□□□□□ -1.34
SMARCC1-204ENST00000462198 SRFP11831 508 aa6.68□□□□□ -1.34
SMARCC1-204ENST00000462198 MYCLP12524 364 aaPredicted RBP6.68□□□□□ -1.34
SMARCC1-204ENST00000462198 XBP1P17861 261 aa6.68□□□□□ -1.34
SMARCC1-204ENST00000462198 EIF2AK2P19525 551 aaKnown RBP6.68□□□□□ -1.34
SMARCC1-204ENST00000462198 HOXA13P31271 388 aaPredicted RBP6.68□□□□□ -1.34
SMARCC1-204ENST00000462198 SCTRP47872 440 aa6.68□□□□□ -1.34
SMARCC1-204ENST00000462198 SARSP49591 514 aaKnown RBP6.68□□□□□ -1.34
SMARCC1-204ENST00000462198 ADCY7P51828 1080 aa6.68□□□□□ -1.34
SMARCC1-204ENST00000462198 ST3GAL1Q11201 340 aa6.68□□□□□ -1.34
SMARCC1-204ENST00000462198 SMC1AQ14683 1233 aaKnown RBP6.68□□□□□ -1.34
SMARCC1-204ENST00000462198 IL31Q6EBC2 164 aa6.68□□□□□ -1.34
SMARCC1-204ENST00000462198 TAF2Q6P1X5 1199 aa6.68□□□□□ -1.34
SMARCC1-204ENST00000462198 C16orf46Q6P387 395 aa6.68□□□□□ -1.34
SMARCC1-204ENST00000462198 DCLRE1AQ6PJP8 1040 aa6.68□□□□□ -1.34
SMARCC1-204ENST00000462198 CCDC149Q6ZUS6 474 aa6.68□□□□□ -1.34
SMARCC1-204ENST00000462198 DPH6Q7L8W6 267 aa6.68□□□□□ -1.34
SMARCC1-204ENST00000462198 TRIM46Q7Z4K8 759 aa6.68□□□□□ -1.34
SMARCC1-204ENST00000462198 FCHSD1Q86WN1 690 aa6.68□□□□□ -1.34
SMARCC1-204ENST00000462198 PDCL2Q8N4E4 241 aa6.68□□□□□ -1.34
SMARCC1-204ENST00000462198 TMEM151AQ8N4L1 468 aa6.68□□□□□ -1.34
SMARCC1-204ENST00000462198 SAMD3Q8N6K7 520 aa6.68□□□□□ -1.34
SMARCC1-204ENST00000462198 FAM184AQ8NB25 1140 aa6.68□□□□□ -1.34
SMARCC1-204ENST00000462198 TMEM87AQ8NBN3 555 aa6.68□□□□□ -1.34
SMARCC1-204ENST00000462198 CCDC148Q8NFR7 591 aa6.68□□□□□ -1.34
SMARCC1-204ENST00000462198 PJA1Q8NG27 643 aa6.68□□□□□ -1.34
SMARCC1-204ENST00000462198 SMARCC2Q8TAQ2 1214 aa6.68□□□□□ -1.34
SMARCC1-204ENST00000462198 LMBR1Q8WVP7 490 aa6.68□□□□□ -1.34
SMARCC1-204ENST00000462198 DNAJB3Q8WWF6 145 aa6.68□□□□□ -1.34
SMARCC1-204ENST00000462198 SCG3Q8WXD2 468 aaKnown RBP6.68□□□□□ -1.34
SMARCC1-204ENST00000462198 BAP1Q92560 729 aa6.68□□□□□ -1.34
SMARCC1-204ENST00000462198 DUSP9Q99956 384 aaKnown RBP6.68□□□□□ -1.34
SMARCC1-204ENST00000462198 LLPHQ9BRT6 129 aaKnown RBP6.68□□□□□ -1.34
SMARCC1-204ENST00000462198 MAF1Q9H063 256 aa6.68□□□□□ -1.34
SMARCC1-204ENST00000462198 SAP130Q9H0E3 1048 aa6.68□□□□□ -1.34
SMARCC1-204ENST00000462198 CWH43Q9H720 699 aa6.68□□□□□ -1.34
SMARCC1-204ENST00000462198 C6orf50Q9HD87 102 aa6.68□□□□□ -1.34
SMARCC1-204ENST00000462198 SH3GLB2Q9NR46 395 aa6.68□□□□□ -1.34
SMARCC1-204ENST00000462198 DZANK1Q9NVP4 752 aa6.68□□□□□ -1.34
SMARCC1-204ENST00000462198 MAP3K20Q9NYL2 800 aaKnown RBP6.68□□□□□ -1.34
SMARCC1-204ENST00000462198 VPS54Q9P1Q0 977 aa6.68□□□□□ -1.34
SMARCC1-204ENST00000462198 CGNQ9P2M7 1197 aaKnown RBP6.68□□□□□ -1.34
SMARCC1-204ENST00000462198 PADI3Q9ULW8 664 aa6.68□□□□□ -1.34
SMARCC1-204ENST00000462198 NRCAMQ92823 1304 aa6.68□□□□□ -1.34
SMARCC1-204ENST00000462198 WDR81Q562E7 1941 aa6.68□□□□□ -1.34
SMARCC1-204ENST00000462198 ITPR1Q14643 2758 aa6.68□□□□□ -1.34
SMARCC1-204ENST00000462198 IGSF10Q6WRI0 2623 aa6.67□□□□□ -1.34
SMARCC1-204ENST00000462198 DENND4AQ7Z401 1863 aa6.67□□□□□ -1.34
SMARCC1-204ENST00000462198 AKAP13Q12802 2813 aa6.67□□□□□ -1.34
SMARCC1-204ENST00000462198 SMCO2A6NFE2 343 aa6.67□□□□□ -1.34
SMARCC1-204ENST00000462198 SPDYE3A6NKU9 549 aa6.67□□□□□ -1.34
SMARCC1-204ENST00000462198 K7ELQ4 463 aaPredicted RBP6.67□□□□□ -1.34
SMARCC1-204ENST00000462198 TULP2O00295 520 aa6.67□□□□□ -1.34
SMARCC1-204ENST00000462198 NOP56O00567 594 aaKnown RBP6.67□□□□□ -1.34
SMARCC1-204ENST00000462198 TNFRSF10BO14763 440 aa6.67□□□□□ -1.34
SMARCC1-204ENST00000462198 OPLAHO14841 1288 aa6.67□□□□□ -1.34
SMARCC1-204ENST00000462198 JAK2O60674 1132 aa6.67□□□□□ -1.34
SMARCC1-204ENST00000462198 EPCAMP16422 314 aa6.67□□□□□ -1.34
SMARCC1-204ENST00000462198 LAG3P18627 525 aa6.67□□□□□ -1.34
SMARCC1-204ENST00000462198 GNA11P29992 359 aa6.67□□□□□ -1.34
SMARCC1-204ENST00000462198 CA8P35219 290 aa6.67□□□□□ -1.34
SMARCC1-204ENST00000462198 EIF1AXP47813 144 aaKnown RBP6.67□□□□□ -1.34
SMARCC1-204ENST00000462198 NASPP49321 788 aaPredicted RBP6.67□□□□□ -1.34
SMARCC1-204ENST00000462198 HSD17B4P51659 736 aa6.67□□□□□ -1.34
SMARCC1-204ENST00000462198 NLRP5P59047 1200 aa6.67□□□□□ -1.34
SMARCC1-204ENST00000462198 STARD6P59095 220 aa6.67□□□□□ -1.34
SMARCC1-204ENST00000462198 TRIM29Q14134 588 aa6.67□□□□□ -1.34
SMARCC1-204ENST00000462198 PTPN14Q15678 1187 aa6.67□□□□□ -1.34
SMARCC1-204ENST00000462198 LPAL2Q16609 132 aa6.67□□□□□ -1.34
SMARCC1-204ENST00000462198 LETM2Q2VYF4 491 aa6.67□□□□□ -1.34
SMARCC1-204ENST00000462198 USP17L6PQ6QN14 398 aa6.67□□□□□ -1.34
SMARCC1-204ENST00000462198 TSSK4Q6SA08 328 aa6.67□□□□□ -1.34
SMARCC1-204ENST00000462198 KCNT2Q6UVM3 1135 aa6.67□□□□□ -1.34
SMARCC1-204ENST00000462198 GPR149Q86SP6 731 aa6.67□□□□□ -1.34
SMARCC1-204ENST00000462198 GPATCH11Q8N954 259 aa6.67□□□□□ -1.34
SMARCC1-204ENST00000462198 NSUN7Q8NE18 718 aaKnown RBP6.67□□□□□ -1.34
SMARCC1-204ENST00000462198 MNS1Q8NEH6 495 aa6.67□□□□□ -1.34
SMARCC1-204ENST00000462198 SLC22A17Q8WUG5 538 aa6.67□□□□□ -1.34
SMARCC1-204ENST00000462198 NELL1Q92832 810 aa6.67□□□□□ -1.34
SMARCC1-204ENST00000462198 SHDQ96IW2 340 aa6.67□□□□□ -1.34
SMARCC1-204ENST00000462198 BCO2Q9BYV7 579 aa6.67□□□□□ -1.34
SMARCC1-204ENST00000462198 GLT8D2Q9H1C3 349 aa6.67□□□□□ -1.34
SMARCC1-204ENST00000462198 TMX1Q9H3N1 280 aa6.67□□□□□ -1.34
SMARCC1-204ENST00000462198 RIC8AQ9NPQ8 531 aa6.67□□□□□ -1.34
SMARCC1-204ENST00000462198 PXMP2Q9NR77 195 aa6.67□□□□□ -1.34
SMARCC1-204ENST00000462198 ARHGEF3Q9NR81 526 aa6.67□□□□□ -1.34
SMARCC1-204ENST00000462198 SEMA4GQ9NTN9 838 aa6.67□□□□□ -1.34
SMARCC1-204ENST00000462198 RNF19AQ9NV58 838 aa6.67□□□□□ -1.34
SMARCC1-204ENST00000462198 CUEDC1Q9NWM3 386 aaPredicted RBP6.67□□□□□ -1.34
SMARCC1-204ENST00000462198 RAB23Q9ULC3 237 aa6.67□□□□□ -1.34
SMARCC1-204ENST00000462198 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.67□□□□□ -1.34
SMARCC1-204ENST00000462198 SQORQ9Y6N5 450 aa6.67□□□□□ -1.34
SMARCC1-204ENST00000462198 MYH15Q9Y2K3 1946 aa6.67□□□□□ -1.34
SMARCC1-204ENST00000462198 C2orf16Q68DN1 1984 aa6.67□□□□□ -1.34
SMARCC1-204ENST00000462198 DOCK8Q8NF50 2099 aa6.67□□□□□ -1.34
SMARCC1-204ENST00000462198 SDK1Q7Z5N4 2213 aa6.66□□□□□ -1.34
SMARCC1-204ENST00000462198 ESYT2A0FGR8 921 aa6.66□□□□□ -1.34
SMARCC1-204ENST00000462198 CYSRT1A8MQ03 144 aa6.66□□□□□ -1.34
SMARCC1-204ENST00000462198 TM4SF5O14894 197 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms