RNA–Protein interactions for RNA: ENST00000461043.6

ERGIC3-211, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-211ENST00000461043 ACAP3Q96P50 834 aa13.24□□□□□ -0.29
ERGIC3-211ENST00000461043 GAS2L1Q99501 681 aaPredicted RBP13.24□□□□□ -0.29
ERGIC3-211ENST00000461043 MSTO1Q9BUK6 570 aa13.24□□□□□ -0.29
ERGIC3-211ENST00000461043 LMAN2LQ9H0V9 348 aa13.24□□□□□ -0.29
ERGIC3-211ENST00000461043 SLC39A2Q9NP94 309 aa13.24□□□□□ -0.29
ERGIC3-211ENST00000461043 TOPORSQ9NS56 1045 aaPredicted RBP13.24□□□□□ -0.29
ERGIC3-211ENST00000461043 EXOC1Q9NV70 894 aa13.24□□□□□ -0.29
ERGIC3-211ENST00000461043 CPSF3Q9UKF6 684 aaKnown RBP13.24□□□□□ -0.29
ERGIC3-211ENST00000461043 SMIM28A0A1B0GU29 152 aa13.23□□□□□ -0.29
ERGIC3-211ENST00000461043 TTC26A0AVF1 554 aa13.23□□□□□ -0.29
ERGIC3-211ENST00000461043 FGF18O76093 207 aa13.23□□□□□ -0.29
ERGIC3-211ENST00000461043 FOSL2P15408 326 aa13.23□□□□□ -0.29
ERGIC3-211ENST00000461043 POU5F1Q01860 360 aaKnown RBP13.23□□□□□ -0.29
ERGIC3-211ENST00000461043 UBE3AQ05086 875 aa13.23□□□□□ -0.29
ERGIC3-211ENST00000461043 RNASELQ05823 741 aaKnown RBP13.23□□□□□ -0.29
ERGIC3-211ENST00000461043 ENOX2Q16206 610 aaKnown RBP13.23□□□□□ -0.29
ERGIC3-211ENST00000461043 CRELD2Q6UXH1 353 aaPredicted RBP13.23□□□□□ -0.29
ERGIC3-211ENST00000461043 TMEM174Q8WUU8 243 aa13.23□□□□□ -0.29
ERGIC3-211ENST00000461043 MRPL38Q96DV4 380 aaKnown RBP13.23□□□□□ -0.29
ERGIC3-211ENST00000461043 CCDC34Q96HJ3 373 aa13.23□□□□□ -0.29
ERGIC3-211ENST00000461043 ZMAT2Q96NC0 199 aaKnown RBP13.23□□□□□ -0.29
ERGIC3-211ENST00000461043 RPS6KC1Q96S38 1066 aa13.23□□□□□ -0.29
ERGIC3-211ENST00000461043 CBWD1Q9BRT8 395 aa13.23□□□□□ -0.29
ERGIC3-211ENST00000461043 PLEKHA5Q9HAU0 1116 aa13.23□□□□□ -0.29
ERGIC3-211ENST00000461043 ALG13Q9NP73 1137 aaKnown RBP13.23□□□□□ -0.29
ERGIC3-211ENST00000461043 MARCH5Q9NX47 278 aa13.23□□□□□ -0.29
ERGIC3-211ENST00000461043 SPG21Q9NZD8 308 aa13.23□□□□□ -0.29
ERGIC3-211ENST00000461043 AGO2Q9UKV8 859 aaKnown RBP13.23□□□□□ -0.29
ERGIC3-211ENST00000461043 LZTS1Q9Y250 596 aa13.23□□□□□ -0.29
ERGIC3-211ENST00000461043 NRP1O14786 923 aa13.22□□□□□ -0.29
ERGIC3-211ENST00000461043 KINO60870 393 aaKnown RBP13.22□□□□□ -0.29
ERGIC3-211ENST00000461043 THP07101 528 aa13.22□□□□□ -0.29
ERGIC3-211ENST00000461043 CXCL8P10145 99 aa13.22□□□□□ -0.29
ERGIC3-211ENST00000461043 MATR3P43243 847 aaKnown RBP eCLIP13.22□□□□□ -0.29
ERGIC3-211ENST00000461043 ALDH7A1P49419 539 aaKnown RBP13.22□□□□□ -0.29
ERGIC3-211ENST00000461043 YARSP54577 528 aaKnown RBP13.22□□□□□ -0.29
ERGIC3-211ENST00000461043 SNRPFP62306 86 aaKnown RBP13.22□□□□□ -0.29
ERGIC3-211ENST00000461043 TUSC3Q13454 348 aa13.22□□□□□ -0.29
ERGIC3-211ENST00000461043 SYCP3Q8IZU3 236 aa13.22□□□□□ -0.29
ERGIC3-211ENST00000461043 ZSWIM2Q8NEG5 633 aa13.22□□□□□ -0.29
ERGIC3-211ENST00000461043 POMGNT1Q8WZA1 660 aa13.22□□□□□ -0.29
ERGIC3-211ENST00000461043 IGSF21Q96ID5 467 aa13.22□□□□□ -0.29
ERGIC3-211ENST00000461043 VN1R3Q9BXE9 311 aa13.22□□□□□ -0.29
ERGIC3-211ENST00000461043 GBP3Q9H0R5 595 aa13.22□□□□□ -0.29
ERGIC3-211ENST00000461043 AGPAT3Q9NRZ7 376 aa13.22□□□□□ -0.29
ERGIC3-211ENST00000461043 LMBRD1Q9NUN5 540 aa13.22□□□□□ -0.29
ERGIC3-211ENST00000461043 PLXNA4Q9HCM2 1894 aa13.22□□□□□ -0.29
ERGIC3-211ENST00000461043 MYO9BQ13459 2157 aa13.21□□□□□ -0.29
ERGIC3-211ENST00000461043 NT5C1B-RDH14C9J2C7 533 aa13.21□□□□□ -0.29
ERGIC3-211ENST00000461043 F8W810 466 aa13.21□□□□□ -0.29
ERGIC3-211ENST00000461043 FSCN2O14926 492 aa13.21□□□□□ -0.29
ERGIC3-211ENST00000461043 ALDH2P05091 517 aa13.21□□□□□ -0.29
ERGIC3-211ENST00000461043 SOX4Q06945 474 aaPredicted RBP13.21□□□□□ -0.29
ERGIC3-211ENST00000461043 ZBTB6Q15916 424 aa13.21□□□□□ -0.29
ERGIC3-211ENST00000461043 KNOP1Q1ED39 458 aaKnown RBP13.21□□□□□ -0.29
ERGIC3-211ENST00000461043 GLRA4Q5JXX5 417 aa13.21□□□□□ -0.29
ERGIC3-211ENST00000461043 NELFCDQ8IXH7 590 aa13.21□□□□□ -0.29
ERGIC3-211ENST00000461043 C12orf56Q8IXR9 622 aa13.21□□□□□ -0.29
ERGIC3-211ENST00000461043 RNF168Q8IYW5 571 aaPredicted RBP13.21□□□□□ -0.29
ERGIC3-211ENST00000461043 POF1BQ8WVV4 589 aa13.21□□□□□ -0.29
ERGIC3-211ENST00000461043 FBXL18Q96ME1 805 aa13.21□□□□□ -0.29
ERGIC3-211ENST00000461043 GBP4Q96PP9 640 aa13.21□□□□□ -0.29
ERGIC3-211ENST00000461043 FAM193BQ96PV7 902 aaPredicted RBP13.21□□□□□ -0.29
ERGIC3-211ENST00000461043 GSDMAQ96QA5 445 aa13.21□□□□□ -0.29
ERGIC3-211ENST00000461043 PAAF1Q9BRP4 392 aa13.21□□□□□ -0.29
ERGIC3-211ENST00000461043 KCTD10Q9H3F6 313 aa13.21□□□□□ -0.29
ERGIC3-211ENST00000461043 PCDHA5Q9Y5H7 936 aa13.21□□□□□ -0.29
ERGIC3-211ENST00000461043 PRRC2BQ5JSZ5 2229 aaKnown RBP13.21□□□□□ -0.29
ERGIC3-211ENST00000461043 ATG2AQ2TAZ0 1938 aa13.21□□□□□ -0.3
ERGIC3-211ENST00000461043 TDRD15B5MCY1 1934 aaKnown RBP13.2□□□□□ -0.3
ERGIC3-211ENST00000461043 LACTBL1A8MY62 500 aa13.2□□□□□ -0.3
ERGIC3-211ENST00000461043 KIAA0391O15091 583 aaKnown RBP13.2□□□□□ -0.3
ERGIC3-211ENST00000461043 EXTL3O43909 919 aa13.2□□□□□ -0.3
ERGIC3-211ENST00000461043 IGFBP4P22692 258 aa13.2□□□□□ -0.3
ERGIC3-211ENST00000461043 OR1G1P47890 313 aa13.2□□□□□ -0.3
ERGIC3-211ENST00000461043 ACOT2P49753 483 aa13.2□□□□□ -0.3
ERGIC3-211ENST00000461043 ERVFC1P60507 584 aa13.2□□□□□ -0.3
ERGIC3-211ENST00000461043 PTPROQ16827 1216 aa13.2□□□□□ -0.3
ERGIC3-211ENST00000461043 COBLL1Q53SF7 1204 aa13.2□□□□□ -0.3
ERGIC3-211ENST00000461043 CD300LGQ6UXG3 332 aa13.2□□□□□ -0.3
ERGIC3-211ENST00000461043 DDX53Q86TM3 631 aaKnown RBP13.2□□□□□ -0.3
ERGIC3-211ENST00000461043 GUF1Q8N442 669 aaKnown RBP13.2□□□□□ -0.3
ERGIC3-211ENST00000461043 ERCC4Q92889 916 aaPredicted RBP13.2□□□□□ -0.3
ERGIC3-211ENST00000461043 CCDC47Q96A33 483 aaKnown RBP13.2□□□□□ -0.3
ERGIC3-211ENST00000461043 TMEM169Q96HH4 297 aa13.2□□□□□ -0.3
ERGIC3-211ENST00000461043 TSPAN18Q96SJ8 248 aa13.2□□□□□ -0.3
ERGIC3-211ENST00000461043 RPF1Q9H9Y2 349 aaKnown RBP13.2□□□□□ -0.3
ERGIC3-211ENST00000461043 RMND1Q9NWS8 449 aa13.2□□□□□ -0.3
ERGIC3-211ENST00000461043 CGNQ9P2M7 1197 aaKnown RBP13.2□□□□□ -0.3
ERGIC3-211ENST00000461043 CACNG4Q9UBN1 327 aa13.2□□□□□ -0.3
ERGIC3-211ENST00000461043 HOOK1Q9UJC3 728 aaKnown RBP13.2□□□□□ -0.3
ERGIC3-211ENST00000461043 FAN1Q9Y2M0 1017 aa13.2□□□□□ -0.3
ERGIC3-211ENST00000461043 PRG3Q9Y2Y8 225 aaPredicted RBP13.2□□□□□ -0.3
ERGIC3-211ENST00000461043 PDCD11Q14690 1871 aaKnown RBP13.19□□□□□ -0.3
ERGIC3-211ENST00000461043 CASTOR2A6NHX0 329 aa13.19□□□□□ -0.3
ERGIC3-211ENST00000461043 TMEM189-UBE2V1I3L0A0 370 aa13.19□□□□□ -0.3
ERGIC3-211ENST00000461043 SMC2O95347 1197 aa13.19□□□□□ -0.3
ERGIC3-211ENST00000461043 SLC34A2O95436 690 aa13.19□□□□□ -0.3
ERGIC3-211ENST00000461043 IRS1P35568 1242 aa13.19□□□□□ -0.3
ERGIC3-211ENST00000461043 WNT7BP56706 349 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms