RNA–Protein interactions for RNA: ENST00000460903.2

YIPF3-206, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 605 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-206ENST00000460903 KIF4AO95239 1232 aa16.93■□□□□ 0.3
YIPF3-206ENST00000460903 CHRNB1P11230 501 aa16.93■□□□□ 0.3
YIPF3-206ENST00000460903 CEBPBP17676 345 aa16.93■□□□□ 0.3
YIPF3-206ENST00000460903 ADD1P35611 737 aaKnown RBP16.93■□□□□ 0.3
YIPF3-206ENST00000460903 CXCL12P48061 93 aa16.93■□□□□ 0.3
YIPF3-206ENST00000460903 GRIK3Q13003 919 aa16.93■□□□□ 0.3
YIPF3-206ENST00000460903 CCDC6Q16204 474 aa16.93■□□□□ 0.3
YIPF3-206ENST00000460903 AASDHQ4L235 1098 aaPredicted RBP16.93■□□□□ 0.3
YIPF3-206ENST00000460903 NOTUMQ6P988 496 aa16.93■□□□□ 0.3
YIPF3-206ENST00000460903 UNQ6494/PRO21346Q6UXR6 183 aa16.93■□□□□ 0.3
YIPF3-206ENST00000460903 CEP57Q86XR8 500 aa16.93■□□□□ 0.3
YIPF3-206ENST00000460903 SLC7A3Q8WY07 619 aa16.93■□□□□ 0.3
YIPF3-206ENST00000460903 FAM3CQ92520 227 aa16.93■□□□□ 0.3
YIPF3-206ENST00000460903 CSRNP2Q9H175 543 aa16.93■□□□□ 0.3
YIPF3-206ENST00000460903 BRD9Q9H8M2 597 aa16.93■□□□□ 0.3
YIPF3-206ENST00000460903 GDE1Q9NZC3 331 aa16.93■□□□□ 0.3
YIPF3-206ENST00000460903 KLK14Q9P0G3 267 aa16.93■□□□□ 0.3
YIPF3-206ENST00000460903 WRAP73Q9P2S5 460 aaPredicted RBP16.93■□□□□ 0.3
YIPF3-206ENST00000460903 ADAMTS20P59510 1910 aa16.93■□□□□ 0.3
YIPF3-206ENST00000460903 ITPR1Q14643 2758 aa16.92■□□□□ 0.3
YIPF3-206ENST00000460903 RHOP08100 348 aa16.92■□□□□ 0.3
YIPF3-206ENST00000460903 AXLP30530 894 aa16.92■□□□□ 0.3
YIPF3-206ENST00000460903 USP11P51784 963 aa16.92■□□□□ 0.3
YIPF3-206ENST00000460903 PSMC5P62195 406 aa16.92■□□□□ 0.3
YIPF3-206ENST00000460903 FERMT3Q86UX7 667 aa16.92■□□□□ 0.3
YIPF3-206ENST00000460903 CCDC51Q96ER9 411 aa16.92■□□□□ 0.3
YIPF3-206ENST00000460903 C2orf42Q9NWW7 574 aa16.92■□□□□ 0.3
YIPF3-206ENST00000460903 CITO14578 2027 aa16.92■□□□□ 0.3
YIPF3-206ENST00000460903 DENND4CQ5VZ89 1909 aa16.92■□□□□ 0.3
YIPF3-206ENST00000460903 ZNF638Q14966 1978 aaKnown RBP16.91■□□□□ 0.3
YIPF3-206ENST00000460903 KLF18A0A0U1RQI7 1052 aa16.91■□□□□ 0.3
YIPF3-206ENST00000460903 EML1O00423 815 aa16.91■□□□□ 0.3
YIPF3-206ENST00000460903 KCNK5O95279 499 aa16.91■□□□□ 0.3
YIPF3-206ENST00000460903 TDP2O95551 362 aa16.91■□□□□ 0.3
YIPF3-206ENST00000460903 ARF4P18085 180 aaPredicted RBP16.91■□□□□ 0.3
YIPF3-206ENST00000460903 GNA11P29992 359 aa16.91■□□□□ 0.3
YIPF3-206ENST00000460903 CNR2P34972 360 aa16.91■□□□□ 0.3
YIPF3-206ENST00000460903 OR1D2P34982 312 aa16.91■□□□□ 0.3
YIPF3-206ENST00000460903 EXOSC10Q01780 885 aaKnown RBP16.91■□□□□ 0.3
YIPF3-206ENST00000460903 AAMPQ13685 434 aa16.91■□□□□ 0.3
YIPF3-206ENST00000460903 RAB33AQ14088 237 aa16.91■□□□□ 0.3
YIPF3-206ENST00000460903 AMHR2Q16671 573 aa16.91■□□□□ 0.3
YIPF3-206ENST00000460903 UVSSAQ2YD98 709 aa16.91■□□□□ 0.3
YIPF3-206ENST00000460903 Q4G0T1 1027 aa16.91■□□□□ 0.3
YIPF3-206ENST00000460903 WDR44Q5JSH3 913 aa16.91■□□□□ 0.3
YIPF3-206ENST00000460903 HEATR6Q6AI08 1181 aaKnown RBP16.91■□□□□ 0.3
YIPF3-206ENST00000460903 LONP2Q86WA8 852 aa16.91■□□□□ 0.3
YIPF3-206ENST00000460903 CDR2LQ86X02 465 aaPredicted RBP16.91■□□□□ 0.3
YIPF3-206ENST00000460903 MAP4K3Q8IVH8 894 aa16.91■□□□□ 0.3
YIPF3-206ENST00000460903 KDF1Q8NAX2 398 aaPredicted RBP16.91■□□□□ 0.3
YIPF3-206ENST00000460903 CCDC12Q8WUD4 166 aaPredicted RBP16.91■□□□□ 0.3
YIPF3-206ENST00000460903 TMEM121BQ9BXQ6 578 aaPredicted RBP16.91■□□□□ 0.3
YIPF3-206ENST00000460903 ZNF334Q9HCZ1 680 aaPredicted RBP16.91■□□□□ 0.3
YIPF3-206ENST00000460903 PIAS3Q9Y6X2 628 aa16.91■□□□□ 0.3
YIPF3-206ENST00000460903 LOC400499M0QZD8 3231 aa16.91■□□□□ 0.3
YIPF3-206ENST00000460903 NCANO14594 1321 aa16.91■□□□□ 0.3
YIPF3-206ENST00000460903 ZMYM2Q9UBW7 1377 aa16.9■□□□□ 0.3
YIPF3-206ENST00000460903 THADAQ6YHU6 1953 aa16.9■□□□□ 0.3
YIPF3-206ENST00000460903 CASTOR2A6NHX0 329 aa16.9■□□□□ 0.3
YIPF3-206ENST00000460903 PTENP60484 403 aa16.9■□□□□ 0.3
YIPF3-206ENST00000460903 FAM78AQ5JUQ0 283 aa16.9■□□□□ 0.3
YIPF3-206ENST00000460903 PRSS36Q5K4E3 855 aa16.9■□□□□ 0.3
YIPF3-206ENST00000460903 STPG1Q5TH74 334 aa16.9■□□□□ 0.3
YIPF3-206ENST00000460903 VITQ6UXI7 678 aa16.9■□□□□ 0.3
YIPF3-206ENST00000460903 SPEM1Q8N4L4 309 aa16.9■□□□□ 0.3
YIPF3-206ENST00000460903 ETNPPLQ8TBG4 499 aa16.9■□□□□ 0.3
YIPF3-206ENST00000460903 CEP170P1Q96L14 293 aa16.9■□□□□ 0.3
YIPF3-206ENST00000460903 TRMT61BQ9BVS5 477 aaKnown RBP16.9■□□□□ 0.3
YIPF3-206ENST00000460903 TRIM6Q9C030 488 aaPredicted RBP16.9■□□□□ 0.3
YIPF3-206ENST00000460903 ARRDC1-AS1Q9H2J1 176 aa16.9■□□□□ 0.3
YIPF3-206ENST00000460903 AVENQ9NQS1 362 aaPredicted RBP16.9■□□□□ 0.3
YIPF3-206ENST00000460903 AXIN1O15169 862 aa16.89■□□□□ 0.29
YIPF3-206ENST00000460903 PAPSS2O95340 614 aaPredicted RBP16.89■□□□□ 0.29
YIPF3-206ENST00000460903 ZNF806P0C7X5 589 aa16.89■□□□□ 0.29
YIPF3-206ENST00000460903 CCNE1P24864 410 aa16.89■□□□□ 0.29
YIPF3-206ENST00000460903 MBTD1Q05BQ5 628 aa16.89■□□□□ 0.29
YIPF3-206ENST00000460903 PTGDRQ13258 359 aa16.89■□□□□ 0.29
YIPF3-206ENST00000460903 TUSC3Q13454 348 aa16.89■□□□□ 0.29
YIPF3-206ENST00000460903 EMC2Q15006 297 aa16.89■□□□□ 0.29
YIPF3-206ENST00000460903 Q6ZS52 159 aa16.89■□□□□ 0.29
YIPF3-206ENST00000460903 C12orf50Q8NA57 414 aaPredicted RBP16.89■□□□□ 0.29
YIPF3-206ENST00000460903 TBCKQ8TEA7 893 aa16.89■□□□□ 0.29
YIPF3-206ENST00000460903 IRF7Q92985 503 aa16.89■□□□□ 0.29
YIPF3-206ENST00000460903 TCEAL4Q96EI5 215 aa16.89■□□□□ 0.29
YIPF3-206ENST00000460903 LSM14BQ9BX40 385 aaKnown RBP16.89■□□□□ 0.29
YIPF3-206ENST00000460903 CXCL16Q9H2A7 254 aa16.89■□□□□ 0.29
YIPF3-206ENST00000460903 ZFP14Q9HCL3 533 aa16.89■□□□□ 0.29
YIPF3-206ENST00000460903 TRPV5Q9NQA5 729 aa16.89■□□□□ 0.29
YIPF3-206ENST00000460903 RBM12Q9NTZ6 932 aaKnown RBP16.89■□□□□ 0.29
YIPF3-206ENST00000460903 WASF3Q9UPY6 502 aa16.89■□□□□ 0.29
YIPF3-206ENST00000460903 INO80B-WBP1J3KQ70 363 aa16.88■□□□□ 0.29
YIPF3-206ENST00000460903 PTGESO14684 152 aa16.88■□□□□ 0.29
YIPF3-206ENST00000460903 ASAP2O43150 1006 aa16.88■□□□□ 0.29
YIPF3-206ENST00000460903 B4GALT5O43286 388 aa16.88■□□□□ 0.29
YIPF3-206ENST00000460903 NPTXRO95502 500 aa16.88■□□□□ 0.29
YIPF3-206ENST00000460903 IGFBP6P24592 240 aaPredicted RBP16.88■□□□□ 0.29
YIPF3-206ENST00000460903 GDI1P31150 447 aa16.88■□□□□ 0.29
YIPF3-206ENST00000460903 RFC5P40937 340 aa16.88■□□□□ 0.29
YIPF3-206ENST00000460903 QARSP47897 775 aaKnown RBP16.88■□□□□ 0.29
YIPF3-206ENST00000460903 PCBP1Q15365 356 aaKnown RBP eCLIP16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms