RNA–Protein interactions for RNA: ENST00000460125.1

NUCB1-208, Transcript of nucleobindin 1, humanhuman

TSL 2

Gene NUCB1, Length 528 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCB1-208ENST00000460125 TSPAN1O60635 241 aa12.12□□□□□ -0.47
NUCB1-208ENST00000460125 ERLIN2O94905 339 aa12.12□□□□□ -0.47
NUCB1-208ENST00000460125 CEBPBP17676 345 aa12.12□□□□□ -0.47
NUCB1-208ENST00000460125 USP11P51784 963 aa12.12□□□□□ -0.47
NUCB1-208ENST00000460125 NPEPPSP55786 919 aa12.12□□□□□ -0.47
NUCB1-208ENST00000460125 GRIK3Q13003 919 aa12.12□□□□□ -0.47
NUCB1-208ENST00000460125 PTGDRQ13258 359 aa12.12□□□□□ -0.47
NUCB1-208ENST00000460125 PCBP1Q15365 356 aaKnown RBP eCLIP12.12□□□□□ -0.47
NUCB1-208ENST00000460125 CCDC6Q16204 474 aa12.12□□□□□ -0.47
NUCB1-208ENST00000460125 PLA2G4FQ68DD2 849 aa12.12□□□□□ -0.47
NUCB1-208ENST00000460125 HEATR6Q6AI08 1181 aaKnown RBP12.12□□□□□ -0.47
NUCB1-208ENST00000460125 PSAPL1Q6NUJ1 521 aa12.12□□□□□ -0.47
NUCB1-208ENST00000460125 CEP57Q86XR8 500 aa12.12□□□□□ -0.47
NUCB1-208ENST00000460125 ZNF579Q8NAF0 562 aaKnown RBP12.12□□□□□ -0.47
NUCB1-208ENST00000460125 SLC7A3Q8WY07 619 aa12.12□□□□□ -0.47
NUCB1-208ENST00000460125 TMEM143Q96AN5 459 aa12.12□□□□□ -0.47
NUCB1-208ENST00000460125 CPB2Q96IY4 423 aa12.12□□□□□ -0.47
NUCB1-208ENST00000460125 LOXL4Q96JB6 756 aa12.12□□□□□ -0.47
NUCB1-208ENST00000460125 PAAF1Q9BRP4 392 aa12.12□□□□□ -0.47
NUCB1-208ENST00000460125 DHX33Q9H6R0 707 aaKnown RBP12.12□□□□□ -0.47
NUCB1-208ENST00000460125 ZFP14Q9HCL3 533 aa12.12□□□□□ -0.47
NUCB1-208ENST00000460125 CACNG4Q9UBN1 327 aa12.12□□□□□ -0.47
NUCB1-208ENST00000460125 BRPF3Q9ULD4 1205 aa12.12□□□□□ -0.47
NUCB1-208ENST00000460125 PIAS3Q9Y6X2 628 aa12.12□□□□□ -0.47
NUCB1-208ENST00000460125 ZMYM2Q9UBW7 1377 aa12.11□□□□□ -0.47
NUCB1-208ENST00000460125 NRG2O14511 850 aaPredicted RBP12.11□□□□□ -0.47
NUCB1-208ENST00000460125 SLC27A2O14975 620 aa12.11□□□□□ -0.47
NUCB1-208ENST00000460125 ASAP2O43150 1006 aa12.11□□□□□ -0.47
NUCB1-208ENST00000460125 ZBTB43O43298 467 aa12.11□□□□□ -0.47
NUCB1-208ENST00000460125 EPN2O95208 641 aa12.11□□□□□ -0.47
NUCB1-208ENST00000460125 AKAP5P24588 427 aa12.11□□□□□ -0.47
NUCB1-208ENST00000460125 GNA11P29992 359 aa12.11□□□□□ -0.47
NUCB1-208ENST00000460125 CDC27P30260 824 aa12.11□□□□□ -0.47
NUCB1-208ENST00000460125 HOXA6P31267 233 aa12.11□□□□□ -0.47
NUCB1-208ENST00000460125 OR1D2P34982 312 aa12.11□□□□□ -0.47
NUCB1-208ENST00000460125 PSMC5P62195 406 aa12.11□□□□□ -0.47
NUCB1-208ENST00000460125 RING1Q06587 406 aa12.11□□□□□ -0.47
NUCB1-208ENST00000460125 FAM78AQ5JUQ0 283 aa12.11□□□□□ -0.47
NUCB1-208ENST00000460125 PLA2G2CQ5R387 149 aa12.11□□□□□ -0.47
NUCB1-208ENST00000460125 PDXDC1Q6P996 788 aa12.11□□□□□ -0.47
NUCB1-208ENST00000460125 WDR5BQ86VZ2 330 aa12.11□□□□□ -0.47
NUCB1-208ENST00000460125 EXOC8Q8IYI6 725 aa12.11□□□□□ -0.47
NUCB1-208ENST00000460125 HACE1Q8IYU2 909 aa12.11□□□□□ -0.47
NUCB1-208ENST00000460125 RNF149Q8NC42 400 aa12.11□□□□□ -0.47
NUCB1-208ENST00000460125 HASPINQ8TF76 798 aa12.11□□□□□ -0.47
NUCB1-208ENST00000460125 BACH2Q9BYV9 841 aa12.11□□□□□ -0.47
NUCB1-208ENST00000460125 NXF3Q9H4D5 531 aaKnown RBP12.11□□□□□ -0.47
NUCB1-208ENST00000460125 LHX6Q9UPM6 363 aa12.11□□□□□ -0.47
NUCB1-208ENST00000460125 PPME1Q9Y570 386 aa12.11□□□□□ -0.47
NUCB1-208ENST00000460125 TDRD15B5MCY1 1934 aaKnown RBP12.1□□□□□ -0.47
NUCB1-208ENST00000460125 KIF4AO95239 1232 aa12.1□□□□□ -0.47
NUCB1-208ENST00000460125 PTPN2P17706 415 aa12.1□□□□□ -0.47
NUCB1-208ENST00000460125 PSMC3P17980 439 aa12.1□□□□□ -0.47
NUCB1-208ENST00000460125 CCNE1P24864 410 aa12.1□□□□□ -0.47
NUCB1-208ENST00000460125 GDI1P31150 447 aa12.1□□□□□ -0.47
NUCB1-208ENST00000460125 RAP1GAPP47736 663 aa12.1□□□□□ -0.47
NUCB1-208ENST00000460125 MLLT6P55198 1093 aaPredicted RBP12.1□□□□□ -0.47
NUCB1-208ENST00000460125 PTENP60484 403 aa12.1□□□□□ -0.47
NUCB1-208ENST00000460125 NCBP1Q09161 790 aaKnown RBP12.1□□□□□ -0.47
NUCB1-208ENST00000460125 TUSC3Q13454 348 aa12.1□□□□□ -0.47
NUCB1-208ENST00000460125 LRRC32Q14392 662 aa12.1□□□□□ -0.47
NUCB1-208ENST00000460125 C8orf34Q49A92 452 aa12.1□□□□□ -0.47
NUCB1-208ENST00000460125 Q4G0T1 1027 aa12.1□□□□□ -0.47
NUCB1-208ENST00000460125 PRSS36Q5K4E3 855 aa12.1□□□□□ -0.47
NUCB1-208ENST00000460125 VITQ6UXI7 678 aa12.1□□□□□ -0.47
NUCB1-208ENST00000460125 FERMT3Q86UX7 667 aa12.1□□□□□ -0.47
NUCB1-208ENST00000460125 CCDC12Q8WUD4 166 aaPredicted RBP12.1□□□□□ -0.47
NUCB1-208ENST00000460125 GATA6Q92908 595 aa12.1□□□□□ -0.47
NUCB1-208ENST00000460125 CEP170P1Q96L14 293 aa12.1□□□□□ -0.47
NUCB1-208ENST00000460125 ASB16Q96NS5 453 aa12.1□□□□□ -0.47
NUCB1-208ENST00000460125 ADAM33Q9BZ11 813 aa12.1□□□□□ -0.47
NUCB1-208ENST00000460125 TRIM6Q9C030 488 aaPredicted RBP12.1□□□□□ -0.47
NUCB1-208ENST00000460125 C2orf42Q9NWW7 574 aa12.1□□□□□ -0.47
NUCB1-208ENST00000460125 KLK14Q9P0G3 267 aa12.1□□□□□ -0.47
NUCB1-208ENST00000460125 COL4A2P08572 1712 aa12.1□□□□□ -0.47
NUCB1-208ENST00000460125 IGF2RP11717 2491 aa12.1□□□□□ -0.47
NUCB1-208ENST00000460125 GREB1Q4ZG55 1949 aa12.09□□□□□ -0.47
NUCB1-208ENST00000460125 GOLGA8AA7E2F4 631 aa12.09□□□□□ -0.47
NUCB1-208ENST00000460125 GOLGA8BA8MQT2 603 aa12.09□□□□□ -0.47
NUCB1-208ENST00000460125 MICAL2O94851 1124 aa12.09□□□□□ -0.47
NUCB1-208ENST00000460125 ARF4P18085 180 aaPredicted RBP12.09□□□□□ -0.47
NUCB1-208ENST00000460125 SPINK2P20155 84 aa12.09□□□□□ -0.47
NUCB1-208ENST00000460125 HOXC13P31276 330 aa12.09□□□□□ -0.47
NUCB1-208ENST00000460125 RFC5P40937 340 aa12.09□□□□□ -0.47
NUCB1-208ENST00000460125 SPIRE1Q08AE8 756 aa12.09□□□□□ -0.47
NUCB1-208ENST00000460125 ELAVL2Q12926 359 aaKnown RBP12.09□□□□□ -0.47
NUCB1-208ENST00000460125 FOXC1Q12948 553 aa12.09□□□□□ -0.47
NUCB1-208ENST00000460125 AMHR2Q16671 573 aa12.09□□□□□ -0.47
NUCB1-208ENST00000460125 CACNA2D4Q7Z3S7 1137 aa12.09□□□□□ -0.47
NUCB1-208ENST00000460125 IFNLR1Q8IU57 520 aaPredicted RBP12.09□□□□□ -0.47
NUCB1-208ENST00000460125 BICD2Q8TD16 824 aa12.09□□□□□ -0.47
NUCB1-208ENST00000460125 DEPDC1BQ8WUY9 529 aa12.09□□□□□ -0.47
NUCB1-208ENST00000460125 TCP11Q8WWU5 503 aa12.09□□□□□ -0.47
NUCB1-208ENST00000460125 TCEAL4Q96EI5 215 aa12.09□□□□□ -0.47
NUCB1-208ENST00000460125 MSANTD3Q96H12 275 aa12.09□□□□□ -0.47
NUCB1-208ENST00000460125 RBM12Q9NTZ6 932 aaKnown RBP12.09□□□□□ -0.47
NUCB1-208ENST00000460125 MTRRQ9UBK8 725 aa12.09□□□□□ -0.47
NUCB1-208ENST00000460125 PARP2Q9UGN5 583 aa12.09□□□□□ -0.47
NUCB1-208ENST00000460125 ARHGEF37A1IGU5 675 aa12.08□□□□□ -0.48
NUCB1-208ENST00000460125 WDR27A2RRH5 827 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms