RNA–Protein interactions for RNA: ENST00000460035.1

CCDC12-204, Transcript of coiled-coil domain containing 12, humanhuman

TSL 2

Gene CCDC12, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-204ENST00000460035 ZNF558Q96NG5 402 aa11.83□□□□□ -0.52
CCDC12-204ENST00000460035 CBWD1Q9BRT8 395 aa11.83□□□□□ -0.52
CCDC12-204ENST00000460035 FAM213AQ9BRX8 229 aa11.83□□□□□ -0.52
CCDC12-204ENST00000460035 NUP62CLQ9H1M0 184 aa11.83□□□□□ -0.52
CCDC12-204ENST00000460035 CXCL16Q9H2A7 254 aa11.83□□□□□ -0.52
CCDC12-204ENST00000460035 PRDM12Q9H4Q4 367 aa11.83□□□□□ -0.52
CCDC12-204ENST00000460035 NRDE2Q9H7Z3 1164 aa11.83□□□□□ -0.52
CCDC12-204ENST00000460035 SMIM28A0A1B0GU29 152 aa11.82□□□□□ -0.52
CCDC12-204ENST00000460035 LACTBL1A8MY62 500 aa11.82□□□□□ -0.52
CCDC12-204ENST00000460035 NT5C1B-RDH14C9J2C7 533 aa11.82□□□□□ -0.52
CCDC12-204ENST00000460035 KIAA0391O15091 583 aaKnown RBP11.82□□□□□ -0.52
CCDC12-204ENST00000460035 TGFB1I1O43294 461 aa11.82□□□□□ -0.52
CCDC12-204ENST00000460035 MBD3O95983 291 aa11.82□□□□□ -0.52
CCDC12-204ENST00000460035 RB1P06400 928 aa11.82□□□□□ -0.52
CCDC12-204ENST00000460035 CXCL8P10145 99 aa11.82□□□□□ -0.52
CCDC12-204ENST00000460035 PBX3P40426 434 aa11.82□□□□□ -0.52
CCDC12-204ENST00000460035 OR1G1P47890 313 aa11.82□□□□□ -0.52
CCDC12-204ENST00000460035 CYP2J2P51589 502 aa11.82□□□□□ -0.52
CCDC12-204ENST00000460035 BCAR1P56945 870 aa11.82□□□□□ -0.52
CCDC12-204ENST00000460035 POU5F1Q01860 360 aaKnown RBP11.82□□□□□ -0.52
CCDC12-204ENST00000460035 GRIK3Q13003 919 aa11.82□□□□□ -0.52
CCDC12-204ENST00000460035 GPM6BQ13491 265 aa11.82□□□□□ -0.52
CCDC12-204ENST00000460035 SLC10A6Q3KNW5 377 aa11.82□□□□□ -0.52
CCDC12-204ENST00000460035 COBLL1Q53SF7 1204 aa11.82□□□□□ -0.52
CCDC12-204ENST00000460035 XKR4Q5GH76 650 aa11.82□□□□□ -0.52
CCDC12-204ENST00000460035 KCNT2Q6UVM3 1135 aa11.82□□□□□ -0.52
CCDC12-204ENST00000460035 C12orf56Q8IXR9 622 aa11.82□□□□□ -0.52
CCDC12-204ENST00000460035 GUF1Q8N442 669 aaKnown RBP11.82□□□□□ -0.52
CCDC12-204ENST00000460035 KLHL23Q8NBE8 558 aa11.82□□□□□ -0.52
CCDC12-204ENST00000460035 COLGALT1Q8NBJ5 622 aa11.82□□□□□ -0.52
CCDC12-204ENST00000460035 RDH13Q8NBN7 331 aa11.82□□□□□ -0.52
CCDC12-204ENST00000460035 GSTCDQ8NEC7 633 aa11.82□□□□□ -0.52
CCDC12-204ENST00000460035 ZSWIM2Q8NEG5 633 aa11.82□□□□□ -0.52
CCDC12-204ENST00000460035 PLEKHA5Q9HAU0 1116 aa11.82□□□□□ -0.52
CCDC12-204ENST00000460035 AGPAT3Q9NRZ7 376 aa11.82□□□□□ -0.52
CCDC12-204ENST00000460035 HSPBP1Q9NZL4 362 aa11.82□□□□□ -0.52
CCDC12-204ENST00000460035 KIAA1468Q9P260 1216 aa11.82□□□□□ -0.52
CCDC12-204ENST00000460035 CGNQ9P2M7 1197 aaKnown RBP11.82□□□□□ -0.52
CCDC12-204ENST00000460035 DNAJB4Q9UDY4 337 aa11.82□□□□□ -0.52
CCDC12-204ENST00000460035 FAN1Q9Y2M0 1017 aa11.82□□□□□ -0.52
CCDC12-204ENST00000460035 CARNS1A5YM72 827 aa11.81□□□□□ -0.52
CCDC12-204ENST00000460035 C5orf67F2Z3F1 127 aa11.81□□□□□ -0.52
CCDC12-204ENST00000460035 PTGESO14684 152 aa11.81□□□□□ -0.52
CCDC12-204ENST00000460035 CALUO43852 315 aaPredicted RBP11.81□□□□□ -0.52
CCDC12-204ENST00000460035 EXTL3O43909 919 aa11.81□□□□□ -0.52
CCDC12-204ENST00000460035 EXOC3O60645 756 aa11.81□□□□□ -0.52
CCDC12-204ENST00000460035 ADRB2P07550 413 aa11.81□□□□□ -0.52
CCDC12-204ENST00000460035 GALTP07902 379 aa11.81□□□□□ -0.52
CCDC12-204ENST00000460035 PRCPP42785 496 aa11.81□□□□□ -0.52
CCDC12-204ENST00000460035 PPP2R3AQ06190 1150 aa11.81□□□□□ -0.52
CCDC12-204ENST00000460035 SPAG1Q07617 926 aa11.81□□□□□ -0.52
CCDC12-204ENST00000460035 DSC1Q08554 894 aa11.81□□□□□ -0.52
CCDC12-204ENST00000460035 STIM1Q13586 685 aa11.81□□□□□ -0.52
CCDC12-204ENST00000460035 ENOX2Q16206 610 aaKnown RBP11.81□□□□□ -0.52
CCDC12-204ENST00000460035 ALKAL1Q6UXT8 129 aa11.81□□□□□ -0.52
CCDC12-204ENST00000460035 GPD1LQ8N335 351 aa11.81□□□□□ -0.52
CCDC12-204ENST00000460035 GOLGA5Q8TBA6 731 aa11.81□□□□□ -0.52
CCDC12-204ENST00000460035 SNX27Q96L92 541 aa11.81□□□□□ -0.52
CCDC12-204ENST00000460035 C11orf84Q9BUA3 381 aaPredicted RBP11.81□□□□□ -0.52
CCDC12-204ENST00000460035 PLVAPQ9BX97 442 aa11.81□□□□□ -0.52
CCDC12-204ENST00000460035 KCTD10Q9H3F6 313 aa11.81□□□□□ -0.52
CCDC12-204ENST00000460035 ALG13Q9NP73 1137 aaKnown RBP11.81□□□□□ -0.52
CCDC12-204ENST00000460035 SPG21Q9NZD8 308 aa11.81□□□□□ -0.52
CCDC12-204ENST00000460035 CPSF3Q9UKF6 684 aaKnown RBP11.81□□□□□ -0.52
CCDC12-204ENST00000460035 PLAGL2Q9UPG8 496 aa11.81□□□□□ -0.52
CCDC12-204ENST00000460035 TTC26A0AVF1 554 aa11.8□□□□□ -0.52
CCDC12-204ENST00000460035 EPOPA6NHQ4 379 aa11.8□□□□□ -0.52
CCDC12-204ENST00000460035 CASTOR2A6NHX0 329 aa11.8□□□□□ -0.52
CCDC12-204ENST00000460035 ZNF233A6NK53 670 aa11.8□□□□□ -0.52
CCDC12-204ENST00000460035 H3BNC9 293 aa11.8□□□□□ -0.52
CCDC12-204ENST00000460035 PDXKO00764 312 aa11.8□□□□□ -0.52
CCDC12-204ENST00000460035 MEFVO15553 781 aaPredicted RBP11.8□□□□□ -0.52
CCDC12-204ENST00000460035 B4GALT3O60512 393 aa11.8□□□□□ -0.52
CCDC12-204ENST00000460035 FGF18O76093 207 aa11.8□□□□□ -0.52
CCDC12-204ENST00000460035 CSPG5O95196 566 aa11.8□□□□□ -0.52
CCDC12-204ENST00000460035 KCNE1P15382 129 aa11.8□□□□□ -0.52
CCDC12-204ENST00000460035 IGFBP4P22692 258 aa11.8□□□□□ -0.52
CCDC12-204ENST00000460035 SLC11A1P49279 550 aa11.8□□□□□ -0.52
CCDC12-204ENST00000460035 KRT17Q04695 432 aa11.8□□□□□ -0.52
CCDC12-204ENST00000460035 TUSC3Q13454 348 aa11.8□□□□□ -0.52
CCDC12-204ENST00000460035 MORC3Q14149 939 aa11.8□□□□□ -0.52
CCDC12-204ENST00000460035 CRELD2Q6UXH1 353 aaPredicted RBP11.8□□□□□ -0.52
CCDC12-204ENST00000460035 CD302Q8IX05 232 aa11.8□□□□□ -0.52
CCDC12-204ENST00000460035 COLGALT2Q8IYK4 626 aa11.8□□□□□ -0.52
CCDC12-204ENST00000460035 TRIML1Q8N9V2 468 aa11.8□□□□□ -0.52
CCDC12-204ENST00000460035 XXYLT1Q8NBI6 393 aa11.8□□□□□ -0.52
CCDC12-204ENST00000460035 GDPD5Q8WTR4 605 aa11.8□□□□□ -0.52
CCDC12-204ENST00000460035 TMEM174Q8WUU8 243 aa11.8□□□□□ -0.52
CCDC12-204ENST00000460035 RABGGTAQ92696 567 aa11.8□□□□□ -0.52
CCDC12-204ENST00000460035 P2RX5Q93086 422 aa11.8□□□□□ -0.52
CCDC12-204ENST00000460035 KIF12Q96FN5 646 aa11.8□□□□□ -0.52
CCDC12-204ENST00000460035 ZMAT2Q96NC0 199 aaKnown RBP11.8□□□□□ -0.52
CCDC12-204ENST00000460035 TSPAN18Q96SJ8 248 aa11.8□□□□□ -0.52
CCDC12-204ENST00000460035 GAS2L1Q99501 681 aaPredicted RBP11.8□□□□□ -0.52
CCDC12-204ENST00000460035 TMEM175Q9BSA9 504 aa11.8□□□□□ -0.52
CCDC12-204ENST00000460035 COLEC11Q9BWP8 271 aa11.8□□□□□ -0.52
CCDC12-204ENST00000460035 KIAA1586Q9HCI6 787 aa11.8□□□□□ -0.52
CCDC12-204ENST00000460035 SLC38A7Q9NVC3 462 aa11.8□□□□□ -0.52
CCDC12-204ENST00000460035 CNTN3Q9P232 1028 aa11.8□□□□□ -0.52
CCDC12-204ENST00000460035 PUF60Q9UHX1 559 aaKnown RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms