RNA–Protein interactions for RNA: ENST00000459994.2

SDF4-204, Transcript of stromal cell derived factor 4, humanhuman

TSL 5

Gene SDF4, Length 604 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-204ENST00000459994 EPCAMP16422 314 aa17.1■□□□□ 0.33
SDF4-204ENST00000459994 SP100P23497 879 aaPredicted RBP17.1■□□□□ 0.33
SDF4-204ENST00000459994 PNOCQ13519 176 aa17.1■□□□□ 0.33
SDF4-204ENST00000459994 NT5DC1Q5TFE4 455 aa17.1■□□□□ 0.33
SDF4-204ENST00000459994 DYMQ7RTS9 669 aa17.1■□□□□ 0.33
SDF4-204ENST00000459994 C12orf76Q8N812 135 aaPredicted RBP17.1■□□□□ 0.33
SDF4-204ENST00000459994 RABGGTAQ92696 567 aa17.1■□□□□ 0.33
SDF4-204ENST00000459994 REEP2Q9BRK0 252 aa17.1■□□□□ 0.33
SDF4-204ENST00000459994 CCDC113Q9H0I3 377 aa17.1■□□□□ 0.33
SDF4-204ENST00000459994 FZD8Q9H461 694 aa17.1■□□□□ 0.33
SDF4-204ENST00000459994 KIAA1468Q9P260 1216 aa17.1■□□□□ 0.33
SDF4-204ENST00000459994 PRG3Q9Y2Y8 225 aaPredicted RBP17.1■□□□□ 0.33
SDF4-204ENST00000459994 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.09■□□□□ 0.33
SDF4-204ENST00000459994 NPHP3-ACAD11A0A0J9YXS1 232 aa17.09■□□□□ 0.33
SDF4-204ENST00000459994 A0A1B0GUA9 196 aa17.09■□□□□ 0.33
SDF4-204ENST00000459994 FRMD3A2A2Y4 597 aa17.09■□□□□ 0.33
SDF4-204ENST00000459994 DCXO43602 365 aa17.09■□□□□ 0.33
SDF4-204ENST00000459994 KLRC4O43908 158 aa17.09■□□□□ 0.33
SDF4-204ENST00000459994 CASP1P29466 404 aa17.09■□□□□ 0.33
SDF4-204ENST00000459994 ZNF131P52739 623 aa17.09■□□□□ 0.33
SDF4-204ENST00000459994 ASIC1P78348 528 aa17.09■□□□□ 0.33
SDF4-204ENST00000459994 DSC1Q08554 894 aa17.09■□□□□ 0.33
SDF4-204ENST00000459994 MAPK7Q13164 816 aa17.09■□□□□ 0.33
SDF4-204ENST00000459994 PTPN14Q15678 1187 aa17.09■□□□□ 0.33
SDF4-204ENST00000459994 EEF1DP3Q658K8 133 aa17.09■□□□□ 0.33
SDF4-204ENST00000459994 PPP4R3CPQ6ZMV5 832 aa17.09■□□□□ 0.33
SDF4-204ENST00000459994 UNC13DQ70J99 1090 aa17.09■□□□□ 0.33
SDF4-204ENST00000459994 CCDC65Q8IXS2 484 aa17.09■□□□□ 0.33
SDF4-204ENST00000459994 SLC22A17Q8WUG5 538 aa17.09■□□□□ 0.33
SDF4-204ENST00000459994 KIFAP3Q92845 792 aa17.09■□□□□ 0.33
SDF4-204ENST00000459994 RPGRIP1Q96KN7 1286 aa17.09■□□□□ 0.33
SDF4-204ENST00000459994 GSDMAQ96QA5 445 aa17.09■□□□□ 0.33
SDF4-204ENST00000459994 PDZD7Q9H5P4 517 aa17.09■□□□□ 0.33
SDF4-204ENST00000459994 FAN1Q9Y2M0 1017 aa17.09■□□□□ 0.33
SDF4-204ENST00000459994 PCDHA5Q9Y5H7 936 aa17.09■□□□□ 0.33
SDF4-204ENST00000459994 KMT2EQ8IZD2 1858 aa17.08■□□□□ 0.33
SDF4-204ENST00000459994 LILRB3O75022 631 aa17.08■□□□□ 0.32
SDF4-204ENST00000459994 HIP1RO75146 1068 aa17.08■□□□□ 0.32
SDF4-204ENST00000459994 TBCAO75347 108 aaKnown RBP17.08■□□□□ 0.32
SDF4-204ENST00000459994 LETM1O95202 739 aaPredicted RBP17.08■□□□□ 0.32
SDF4-204ENST00000459994 EFEMP2O95967 443 aa17.08■□□□□ 0.32
SDF4-204ENST00000459994 GAP43P17677 238 aa17.08■□□□□ 0.32
SDF4-204ENST00000459994 OR1G1P47890 313 aa17.08■□□□□ 0.32
SDF4-204ENST00000459994 KCNB1Q14721 858 aa17.08■□□□□ 0.32
SDF4-204ENST00000459994 PCBP1Q15365 356 aaKnown RBP eCLIP17.08■□□□□ 0.321e-8■■□□□ 11.4
SDF4-204ENST00000459994 SLC27A1Q6PCB7 646 aa17.08■□□□□ 0.32
SDF4-204ENST00000459994 DAW1Q8N136 415 aa17.08■□□□□ 0.32
SDF4-204ENST00000459994 SMARCE1Q969G3 411 aa17.08■□□□□ 0.32
SDF4-204ENST00000459994 CCDC47Q96A33 483 aaKnown RBP17.08■□□□□ 0.32
SDF4-204ENST00000459994 CCDC51Q96ER9 411 aa17.08■□□□□ 0.32
SDF4-204ENST00000459994 B3GALT6Q96L58 329 aa17.08■□□□□ 0.32
SDF4-204ENST00000459994 DRC1Q96MC2 740 aa17.08■□□□□ 0.32
SDF4-204ENST00000459994 FAM193BQ96PV7 902 aaPredicted RBP17.08■□□□□ 0.32
SDF4-204ENST00000459994 PAAF1Q9BRP4 392 aa17.08■□□□□ 0.32
SDF4-204ENST00000459994 TMEM175Q9BSA9 504 aa17.08■□□□□ 0.32
SDF4-204ENST00000459994 PHF7Q9BWX1 381 aaPredicted RBP17.08■□□□□ 0.32
SDF4-204ENST00000459994 C17orf75Q9HAS0 396 aa17.08■□□□□ 0.32
SDF4-204ENST00000459994 IRAK3Q9Y616 596 aa17.08■□□□□ 0.32
SDF4-204ENST00000459994 FAM13AO94988 1023 aa17.07■□□□□ 0.32
SDF4-204ENST00000459994 RPN1P04843 607 aaKnown RBP17.07■□□□□ 0.32
SDF4-204ENST00000459994 ALDH2P05091 517 aa17.07■□□□□ 0.32
SDF4-204ENST00000459994 PRKCBP05771 671 aa17.07■□□□□ 0.32
SDF4-204ENST00000459994 IDEP14735 1019 aa17.07■□□□□ 0.32
SDF4-204ENST00000459994 EHHADHQ08426 723 aa17.07■□□□□ 0.32
SDF4-204ENST00000459994 RAD51AP2Q09MP3 1159 aa17.07■□□□□ 0.32
SDF4-204ENST00000459994 CBX2Q14781 532 aaPredicted RBP17.07■□□□□ 0.32
SDF4-204ENST00000459994 FAM187BQ17R55 369 aa17.07■□□□□ 0.32
SDF4-204ENST00000459994 RNF168Q8IYW5 571 aaPredicted RBP17.07■□□□□ 0.32
SDF4-204ENST00000459994 RSPH1Q8WYR4 309 aa17.07■□□□□ 0.32
SDF4-204ENST00000459994 CASP10Q92851 521 aa17.07■□□□□ 0.32
SDF4-204ENST00000459994 KLHL5Q96PQ7 755 aa17.07■□□□□ 0.32
SDF4-204ENST00000459994 POP1Q99575 1024 aaKnown RBP17.07■□□□□ 0.32
SDF4-204ENST00000459994 GTPBP4Q9BZE4 634 aaKnown RBP17.07■□□□□ 0.32
SDF4-204ENST00000459994 TRIM6Q9C030 488 aaPredicted RBP17.07■□□□□ 0.32
SDF4-204ENST00000459994 POMKQ9H5K3 350 aa17.07■□□□□ 0.32
SDF4-204ENST00000459994 PARVGQ9HBI0 331 aa17.07■□□□□ 0.32
SDF4-204ENST00000459994 PANK4Q9NVE7 773 aa17.07■□□□□ 0.32
SDF4-204ENST00000459994 PRMT7Q9NVM4 692 aaPredicted RBP17.07■□□□□ 0.32
SDF4-204ENST00000459994 RMND1Q9NWS8 449 aa17.07■□□□□ 0.32
SDF4-204ENST00000459994 KANSL3Q9P2N6 904 aa17.07■□□□□ 0.32
SDF4-204ENST00000459994 SEL1LQ9UBV2 794 aa17.07■□□□□ 0.32
SDF4-204ENST00000459994 PARP2Q9UGN5 583 aa17.07■□□□□ 0.32
SDF4-204ENST00000459994 KCNG1Q9UIX4 513 aa17.07■□□□□ 0.32
SDF4-204ENST00000459994 C2CD2LO14523 706 aa17.06■□□□□ 0.32
SDF4-204ENST00000459994 RHOBTB3O94955 611 aa17.06■□□□□ 0.32
SDF4-204ENST00000459994 CNPP09543 421 aaKnown RBP17.06■□□□□ 0.32
SDF4-204ENST00000459994 IGFBP6P24592 240 aaPredicted RBP17.06■□□□□ 0.32
SDF4-204ENST00000459994 NAMPTP43490 491 aa17.06■□□□□ 0.32
SDF4-204ENST00000459994 CACNB1Q02641 598 aaPredicted RBP17.06■□□□□ 0.32
SDF4-204ENST00000459994 HERC4Q5GLZ8 1057 aaPredicted RBP17.06■□□□□ 0.32
SDF4-204ENST00000459994 RARS2Q5T160 578 aaKnown RBP17.06■□□□□ 0.32
SDF4-204ENST00000459994 ZBTB8OSQ8IWT0 167 aa17.06■□□□□ 0.32
SDF4-204ENST00000459994 ERCC4Q92889 916 aaPredicted RBP17.06■□□□□ 0.32
SDF4-204ENST00000459994 UBN1Q9NPG3 1134 aa17.06■□□□□ 0.32
SDF4-204ENST00000459994 SNTG2Q9NY99 539 aa17.06■□□□□ 0.32
SDF4-204ENST00000459994 LARSQ9P2J5 1176 aaKnown RBP17.06■□□□□ 0.32
SDF4-204ENST00000459994 GIT1Q9Y2X7 761 aa17.06■□□□□ 0.32
SDF4-204ENST00000459994 FSD2A1L4K1 749 aa17.05■□□□□ 0.32
SDF4-204ENST00000459994 PTGESO14684 152 aa17.05■□□□□ 0.32
SDF4-204ENST00000459994 SOD2P04179 222 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms