RNA–Protein interactions for RNA: ENST00000459708.1

SSX2IP-204, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 5

Gene SSX2IP, Length 453 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-204ENST00000459708 PARPBPQ9NWS1 579 aa4.91□□□□□ -1.62
SSX2IP-204ENST00000459708 SORCS3Q9UPU3 1222 aa4.91□□□□□ -1.62
SSX2IP-204ENST00000459708 EEA1Q15075 1411 aa4.9□□□□□ -1.62
SSX2IP-204ENST00000459708 ZRANB2O95218 330 aaKnown RBP eCLIP4.9□□□□□ -1.63
SSX2IP-204ENST00000459708 AMY1AP04745 511 aa4.9□□□□□ -1.63
SSX2IP-204ENST00000459708 RAP2AP10114 183 aa4.9□□□□□ -1.63
SSX2IP-204ENST00000459708 ANAPC15P60006 121 aa4.9□□□□□ -1.63
SSX2IP-204ENST00000459708 RAP2BP61225 183 aa4.9□□□□□ -1.63
SSX2IP-204ENST00000459708 KIF23Q02241 960 aaPredicted RBP4.9□□□□□ -1.63
SSX2IP-204ENST00000459708 SP140Q13342 867 aa4.9□□□□□ -1.63
SSX2IP-204ENST00000459708 C3orf36Q3SXR2 165 aa4.9□□□□□ -1.63
SSX2IP-204ENST00000459708 RABL3Q5HYI8 236 aa4.9□□□□□ -1.63
SSX2IP-204ENST00000459708 FAM47AQ5JRC9 791 aa4.9□□□□□ -1.63
SSX2IP-204ENST00000459708 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.9□□□□□ -1.63
SSX2IP-204ENST00000459708 CCHCR1Q8TD31 782 aa4.9□□□□□ -1.63
SSX2IP-204ENST00000459708 C7orf25Q9BPX7 421 aa4.9□□□□□ -1.63
SSX2IP-204ENST00000459708 NDC1Q9BTX1 674 aa4.9□□□□□ -1.63
SSX2IP-204ENST00000459708 RUVBL1Q9Y265 456 aaKnown RBP4.9□□□□□ -1.63
SSX2IP-204ENST00000459708 MRFAP1Q9Y605 127 aa4.9□□□□□ -1.63
SSX2IP-204ENST00000459708 ACTL7AQ9Y615 435 aa4.9□□□□□ -1.63
SSX2IP-204ENST00000459708 BICRAQ9NZM4 1560 aa4.9□□□□□ -1.63
SSX2IP-204ENST00000459708 TBKBP1A7MCY6 615 aa4.89□□□□□ -1.63
SSX2IP-204ENST00000459708 AHRRA9YTQ3 701 aa4.89□□□□□ -1.63
SSX2IP-204ENST00000459708 SCAF4O95104 1147 aaKnown RBP4.89□□□□□ -1.63
SSX2IP-204ENST00000459708 ZNF202O95125 648 aa4.89□□□□□ -1.63
SSX2IP-204ENST00000459708 SNRPA1P09661 255 aaKnown RBP4.89□□□□□ -1.63
SSX2IP-204ENST00000459708 NR4A1P22736 598 aa4.89□□□□□ -1.63
SSX2IP-204ENST00000459708 EDNRBP24530 442 aa4.89□□□□□ -1.63
SSX2IP-204ENST00000459708 WASP42768 502 aa4.89□□□□□ -1.63
SSX2IP-204ENST00000459708 SLC16A1P53985 500 aa4.89□□□□□ -1.63
SSX2IP-204ENST00000459708 TARDBPQ13148 414 aaKnown RBP eCLIP4.89□□□□□ -1.63
SSX2IP-204ENST00000459708 MTM1Q13496 603 aa4.89□□□□□ -1.63
SSX2IP-204ENST00000459708 TUBA3CQ13748 450 aa4.89□□□□□ -1.63
SSX2IP-204ENST00000459708 BMT2Q1RMZ1 405 aa4.89□□□□□ -1.63
SSX2IP-204ENST00000459708 LSM12Q3MHD2 195 aaKnown RBP4.89□□□□□ -1.63
SSX2IP-204ENST00000459708 FNDC7Q5VTL7 733 aa4.89□□□□□ -1.63
SSX2IP-204ENST00000459708 EFCAB2Q5VUJ9 269 aa4.89□□□□□ -1.63
SSX2IP-204ENST00000459708 TUBA3EQ6PEY2 450 aa4.89□□□□□ -1.63
SSX2IP-204ENST00000459708 DRICH1Q6PGQ1 229 aaPredicted RBP4.89□□□□□ -1.63
SSX2IP-204ENST00000459708 MIGA2Q7L4E1 593 aa4.89□□□□□ -1.63
SSX2IP-204ENST00000459708 RHOT1Q8IXI2 618 aa4.89□□□□□ -1.63
SSX2IP-204ENST00000459708 CPT1CQ8TCG5 803 aa4.89□□□□□ -1.63
SSX2IP-204ENST00000459708 NEU1Q99519 415 aa4.89□□□□□ -1.63
SSX2IP-204ENST00000459708 MYOCQ99972 504 aa4.89□□□□□ -1.63
SSX2IP-204ENST00000459708 MRI1Q9BV20 369 aa4.89□□□□□ -1.63
SSX2IP-204ENST00000459708 ZNF768Q9H5H4 540 aaKnown RBP4.89□□□□□ -1.63
SSX2IP-204ENST00000459708 SAP30BPQ9UHR5 308 aaKnown RBP4.89□□□□□ -1.63
SSX2IP-204ENST00000459708 EIF2B4Q9UI10 523 aaKnown RBP4.89□□□□□ -1.63
SSX2IP-204ENST00000459708 LIMCH1Q9UPQ0 1083 aa4.89□□□□□ -1.63
SSX2IP-204ENST00000459708 CHST2Q9Y4C5 530 aa4.89□□□□□ -1.63
SSX2IP-204ENST00000459708 IPPQ9Y573 584 aa4.89□□□□□ -1.63
SSX2IP-204ENST00000459708 PNPLA7Q6ZV29 1317 aa4.89□□□□□ -1.63
SSX2IP-204ENST00000459708 CCDC154A6NI56 674 aa4.88□□□□□ -1.63
SSX2IP-204ENST00000459708 TRIM24O15164 1050 aa4.88□□□□□ -1.63
SSX2IP-204ENST00000459708 PJA2O43164 708 aa4.88□□□□□ -1.63
SSX2IP-204ENST00000459708 HTRA2O43464 458 aaPredicted RBP4.88□□□□□ -1.63
SSX2IP-204ENST00000459708 IL2RBP14784 551 aa4.88□□□□□ -1.63
SSX2IP-204ENST00000459708 TGM1P22735 817 aa4.88□□□□□ -1.63
SSX2IP-204ENST00000459708 ZFP36P26651 326 aaKnown RBP4.88□□□□□ -1.63
SSX2IP-204ENST00000459708 CLRN1P58418 232 aa4.88□□□□□ -1.63
SSX2IP-204ENST00000459708 FAM189BP81408 668 aa4.88□□□□□ -1.63
SSX2IP-204ENST00000459708 ATP8B2P98198 1209 aa4.88□□□□□ -1.63
SSX2IP-204ENST00000459708 EXOSC10Q01780 885 aaKnown RBP4.88□□□□□ -1.63
SSX2IP-204ENST00000459708 NHLH2Q02577 135 aa4.88□□□□□ -1.63
SSX2IP-204ENST00000459708 UAP1L1Q3KQV9 507 aa4.88□□□□□ -1.63
SSX2IP-204ENST00000459708 EFCAB12Q6NXP0 572 aa4.88□□□□□ -1.63
SSX2IP-204ENST00000459708 ZNF276Q8N554 614 aa4.88□□□□□ -1.63
SSX2IP-204ENST00000459708 CASKIN2Q8WXE0 1202 aa4.88□□□□□ -1.63
SSX2IP-204ENST00000459708 KAT5Q92993 513 aa4.88□□□□□ -1.63
SSX2IP-204ENST00000459708 COA7Q96BR5 231 aa4.88□□□□□ -1.63
SSX2IP-204ENST00000459708 CHMP4CQ96CF2 233 aa4.88□□□□□ -1.63
SSX2IP-204ENST00000459708 TEX101Q9BY14 249 aa4.88□□□□□ -1.63
SSX2IP-204ENST00000459708 SLC2A4RGQ9NR83 387 aa4.88□□□□□ -1.63
SSX2IP-204ENST00000459708 TMEM140Q9NV12 185 aa4.88□□□□□ -1.63
SSX2IP-204ENST00000459708 DDX56Q9NY93 547 aaKnown RBP4.88□□□□□ -1.63
SSX2IP-204ENST00000459708 MOCS1Q9NZB8 636 aa4.88□□□□□ -1.63
SSX2IP-204ENST00000459708 SLC23A1Q9UHI7 598 aa4.88□□□□□ -1.63
SSX2IP-204ENST00000459708 PCDHA13Q9Y5I0 950 aa4.88□□□□□ -1.63
SSX2IP-204ENST00000459708 ZNF185O15231 689 aa4.87□□□□□ -1.63
SSX2IP-204ENST00000459708 NARSO43776 548 aaKnown RBP4.87□□□□□ -1.63
SSX2IP-204ENST00000459708 RPS6KA4O75676 772 aa4.87□□□□□ -1.63
SSX2IP-204ENST00000459708 ZSCAN20P17040 1043 aaPredicted RBP4.87□□□□□ -1.63
SSX2IP-204ENST00000459708 ATP5JP18859 108 aa4.87□□□□□ -1.63
SSX2IP-204ENST00000459708 DDCP20711 480 aa4.87□□□□□ -1.63
SSX2IP-204ENST00000459708 NEK2P51955 445 aa4.87□□□□□ -1.63
SSX2IP-204ENST00000459708 CHN2P52757 468 aa4.87□□□□□ -1.63
SSX2IP-204ENST00000459708 RNASE9P60153 205 aaKnown RBP4.87□□□□□ -1.63
SSX2IP-204ENST00000459708 IGBP1P78318 339 aa4.87□□□□□ -1.63
SSX2IP-204ENST00000459708 IL10RAQ13651 578 aa4.87□□□□□ -1.63
SSX2IP-204ENST00000459708 FHL2Q14192 279 aa4.87□□□□□ -1.63
SSX2IP-204ENST00000459708 RRP12Q5JTH9 1297 aaKnown RBP4.87□□□□□ -1.63
SSX2IP-204ENST00000459708 ATXN7L2Q5T6C5 722 aaPredicted RBP4.87□□□□□ -1.63
SSX2IP-204ENST00000459708 ZBTB46Q86UZ6 589 aa4.87□□□□□ -1.63
SSX2IP-204ENST00000459708 CMTR2Q8IYT2 770 aaKnown RBP4.87□□□□□ -1.63
SSX2IP-204ENST00000459708 DCBLD1Q8N8Z6 715 aa4.87□□□□□ -1.63
SSX2IP-204ENST00000459708 ZFP28Q8NHY6 868 aa4.87□□□□□ -1.63
SSX2IP-204ENST00000459708 ZNF483Q8TF39 744 aaPredicted RBP4.87□□□□□ -1.63
SSX2IP-204ENST00000459708 SLC25A43Q8WUT9 341 aaPredicted RBP4.87□□□□□ -1.63
SSX2IP-204ENST00000459708 HDAC10Q969S8 669 aa4.87□□□□□ -1.63
SSX2IP-204ENST00000459708 PHACTR3Q96KR7 559 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms